Cucsat.G12015 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12015
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein RTE1-HOMOLOG
Location	ctg1820: 4998926 .. 5001149 (-)
RNA-Seq Expression	Cucsat.G12015
Synteny	Cucsat.G12015

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAGAACTTCGCCGGAGTTTCCCCCGATCAGAAACTACTTAGAAATACGTTCTGAATTCTGAACTTCGTCTCAGTTCTTTTAAAAAAAGCGCAAAAGTCAAAAACGGCGTCGTTTCGGTTCTCTTGGATTTAACATATACCAAAATCAATTTTAACAACCCCCCGGTCTCAACTTTGGAAACCGATCAAATTGATCGGTGATCAGGGAAGTTGCTTCACACGATCTTTCTTGGATTCTTCACCAAAATTATTCTGATTGGTAACTTCAACTTTCTTTCACACTTCTCTTCAGAAATTTGTTTATTTGTACTTCAAATTCTTCGTGTAACTTGTTTGTTTTACCTGTTTGATTTGTGTTCTATGCACTTGGTATTTGACTATCCCTAAAGTTGAGGAGATTTGGGAACTTCATCTCGTTATTTGATTGTAGGTAGCCGAGGGGTTTCCTCTTAACCTATTTTCTCAATTATGTTTTCTGAATCGAGATGAGCATACGGGTCAATGGGTGCTTGCAATTCCAGCCTATGGCTGCTTCTCTAATAAATACTGGAAGTTACTACTCAACTTCATACAATGTCTTTCCCTCTTCTTTCTTCCTTCGCCCTTTGCATGAATTCGTTTGAAAGTTTGGTTGAACAGCCTAATTTCGTTCTTCAAGATGAAATTTTGGCCTCTGTTTAAACTTTTTCTAATACATTCTCGCTATCTGCGGTCATCCTCCCAAAACGGTTATAAGATTTGCTGAGATTATGAAATTGACGTAAGGAAATTGGGATCGTTTAAGGTTAGGTCAATTTTTTTGTTGAAGCTCTGTTAAATTAAGGGTATTCATTTCATTTCAGGCAGCATTTTATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGGTACAAGCTAATTTCCACAATTGAACTAAAGATCAATCCCTTACAATCATTTTTTACCCAACTGATTTCATCATATATTAGTGATATAATATTAGATCTGGCCTTATTTTTGGATCAATTCGTGATTTAACATAGTATACATAGTCCAAAAGGTTCTGTGTTCAAACCCTATTTTCTCTAATCTTGATTTTCACATGTTGGATCTCTTACATATTTCAAGCTCTACAAGTGAGTGAGGAGTGTTAGTAATATAATATTAAATTTGTTTGACCCATTAGCTCAAGATTTTTTGTTTAATTGGTGATTTAACAATGTACTCGACTTGCAGTGTTGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTTTTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAAAATGTAACACATTGGATTCTGGTAGTTAAGTGAAGGTCAATTGCTTTTCTTCGTTGTATTTGTCCAAATCTATGTTATTGTGCCGTGCAGTTCATATGGCGTATTATATACCATGTAGGTAGGAGGCAAATCATTTGATGTAACTCACGACCGTGAATTCTGGCAGCTTGTTTAGGCCATTAATGAATAGAGTTCATGAAATGCTAACTAGATAAGTGATTATGATAAATCAAAATATCTAAATAAAATCGTTTGTACAATTTTAAATCAGAACTTTTATCTTGTCTGTTGAATGTACTATTTAGTTTTAAAGGCAAGTCTGAA

Coding sequence (CDS)

ATGAAATTGACGCAGCATTTTATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGTGTTGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTTTTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAA

Protein sequence

MKLTQHFMSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL

Homology

[Close]

BLAST of Cucsat.G12015 vs. ExPASy Swiss-Prot
Match: Q9SD42 (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.6e-76
Identity = 140/235 (59.57%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 13  ESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 72
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 73  LDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEE----------ELREVDHSREI 132
           LDFAGPNFVCVDNF FGAV+RY+QIN++   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 133 STWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWV 192
            TWDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 193 SKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           +K A++++ LP ++V++IG+ LG  TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Cucsat.G12015 vs. ExPASy Swiss-Prot
Match: F4ITL6 (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RTE1 PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.5e-59
Identity = 112/210 (53.33%), Postives = 149/210 (70.95%), Query Frame = 0


Query: 33  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 92
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 93  RYLQINRDKCCI----SAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNC 152
           RYLQ++R KCC+      H  +   +  D      TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 153 HSFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 212
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 213 DTTFLTFLAFFTFFLVGWFILGTYVFKNLV 236
              FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

[Close]

BLAST of Cucsat.G12015 vs. ExPASy Swiss-Prot
Match: Q9H0R3 (Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-31
Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 34  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 93
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 94  YLQINRDKCCISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVA 153
           Y +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 YWKLDPAQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 154 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 205
             LN + +     WN+V L     L G++VS GA ++T+LPF+++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

[Close]

BLAST of Cucsat.G12015 vs. ExPASy Swiss-Prot
Match: Q8BVA2 (Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.7e-31
Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 34  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 93
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 94  YLQINRDKCCISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVA 153
           + +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 FWKLDPGQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 154 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 205
             LN + +     WN+V L     + G++VS GA ++T+LPFV++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTV 201

[Close]

BLAST of Cucsat.G12015 vs. NCBI nr
Match: XP_031740651.1 (protein RTE1-HOMOLOG isoform X1 [Cucumis sativus])

HSP 1 Score: 479 bits (1233), Expect = 1.23e-170
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MKLTQHFMSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFI 60
           MKLTQHFMSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFI
Sbjct: 1   MKLTQHFMSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFI 60

Query: 61  GHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSR 120
           GHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSR
Sbjct: 61  GHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSR 120

Query: 121 EISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGR 180
           EISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGR
Sbjct: 121 EISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGR 180

Query: 181 WVSKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237
           WVSKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 WVSKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237

[Close]

BLAST of Cucsat.G12015 vs. NCBI nr
Match: XP_004146489.1 (protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical protein Csa_014607 [Cucumis sativus])

HSP 1 Score: 465 bits (1196), Expect = 4.16e-165
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 8   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 67
           MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 68  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 127
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 128 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 187
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 188 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of Cucsat.G12015 vs. NCBI nr
Match: XP_008452120.1 (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 457 bits (1177), Expect = 3.28e-162
Identity = 226/230 (98.26%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 8   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 67
           MSLEMES+KDPENQLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 68  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 127
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVD SREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 128 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 187
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 188 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of Cucsat.G12015 vs. NCBI nr
Match: XP_038884143.1 (protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [Benincasa hispida])

HSP 1 Score: 444 bits (1143), Expect = 4.33e-157
Identity = 218/226 (96.46%), Postives = 221/226 (97.79%), Query Frame = 0


Query: 12  MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 71
           MESS DPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV
Sbjct: 1   MESSNDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 72  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRR 131
           ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCIS HRSEEELREVDH REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHGREISTWDDALRR 120

Query: 132 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 191
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR GGWNVVNLAALIFLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRIGGWNVVNLAALIFLKGRWVSKGAVIRTF 180

Query: 192 LPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237
           LPFVVVF+IGLA+G TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFNIGLAVGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

[Close]

BLAST of Cucsat.G12015 vs. NCBI nr
Match: XP_022136620.1 (protein RTE1-HOMOLOG [Momordica charantia])

HSP 1 Score: 434 bits (1116), Expect = 5.66e-153
Identity = 211/226 (93.36%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 12  MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 71
           MES+ DPENQLM+EGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 72  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRR 131
           ILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS HRSE+E+RE DH REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 132 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 191
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 192 LPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237
           LPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

[Close]

BLAST of Cucsat.G12015 vs. ExPASy TrEMBL
Match: A0A0A0KXZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 2.02e-165
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 8   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 67
           MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 68  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 127
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 128 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 187
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 188 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of Cucsat.G12015 vs. ExPASy TrEMBL
Match: A0A1S4DZL7 (protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1)

HSP 1 Score: 457 bits (1177), Expect = 1.59e-162
Identity = 226/230 (98.26%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 8   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 67
           MSLEMES+KDPENQLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 68  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 127
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVD SREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 128 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 187
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 188 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of Cucsat.G12015 vs. ExPASy TrEMBL
Match: A0A6J1C4G0 (protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1)

HSP 1 Score: 434 bits (1116), Expect = 2.74e-153
Identity = 211/226 (93.36%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 12  MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 71
           MES+ DPENQLM+EGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 72  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRR 131
           ILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS HRSE+E+RE DH REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 132 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 191
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 192 LPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237
           LPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

[Close]

BLAST of Cucsat.G12015 vs. ExPASy TrEMBL
Match: A0A5D3CZH3 (Protein RTE1-HOMOLOG OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005200 PE=4 SV=1)

HSP 1 Score: 431 bits (1109), Expect = 2.15e-152
Identity = 212/215 (98.60%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 23  MIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVC 82
           MIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVC
Sbjct: 1   MIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVC 60

Query: 83  VDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYN 142
           VDNFTFGAVARYLQINRDKCCISAHRSEEELREVD SREISTWDDALRRSTQEFQHR+YN
Sbjct: 61  VDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDDALRRSTQEFQHRSYN 120

Query: 143 LLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGL 202
           LLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGL
Sbjct: 121 LLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGL 180

Query: 203 ALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237
           ALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 ALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 215

[Close]

BLAST of Cucsat.G12015 vs. ExPASy TrEMBL
Match: A0A6J1FW19 (protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 2.07e-148
Identity = 205/226 (90.71%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 12  MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 71
           M SS DPENQ+MIEGN+ Q MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 72  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRR 131
           ILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS HRSE+E REVD+ REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 132 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 191
           STQEFQHRAYNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 192 LPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237
           LPF VVFSIG+A+  TTFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Sbjct: 181 LPFGVVFSIGVAMVGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 226

The following BLAST results are available for this feature:

BLAST of Cucsat.G12015 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD42	2.6e-76	59.57	Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1	[more]
F4ITL6	6.5e-59	53.33	Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9H0R3	2.6e-31	40.12	Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2	[more]
Q8BVA2	5.7e-31	39.53	Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1	[more]

BLAST of Cucsat.G12015 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740651.1	1.23e-170	100.00	protein RTE1-HOMOLOG isoform X1 [Cucumis sativus]	[more]
XP_004146489.1	4.16e-165	100.00	protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical prote...	[more]
XP_008452120.1	3.28e-162	98.26	PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protei...	[more]
XP_038884143.1	4.33e-157	96.46	protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [B...	[more]
XP_022136620.1	5.66e-153	93.36	protein RTE1-HOMOLOG [Momordica charantia]	[more]

BLAST of Cucsat.G12015 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXZ7	2.02e-165	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1	[more]
A0A1S4DZL7	1.59e-162	98.26	protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1	[more]
A0A6J1C4G0	2.74e-153	93.36	protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1	[more]
A0A5D3CZH3	2.15e-152	98.60	Protein RTE1-HOMOLOG OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G...	[more]
A0A6J1FW19	2.07e-148	90.71	protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008496	TMEM222/RTE1	PFAM	PF05608	DUF778	coord: 107..181 e-value: 3.3E-19 score: 70.0 coord: 50..101 e-value: 8.8E-21 score: 75.1
IPR008496	TMEM222/RTE1	PANTHER	PTHR20921	UNCHARACTERIZED	coord: 8..237
None	No IPR available	PANTHER	PTHR20921:SF5	SUBFAMILY NOT NAMED	coord: 8..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12015.T2	Cucsat.G12015.T2	mRNA
Cucsat.G12015.T1	Cucsat.G12015.T1	mRNA
Cucsat.G12015.T4	Cucsat.G12015.T4	mRNA
Cucsat.G12015.T5	Cucsat.G12015.T5	mRNA
Cucsat.G12015.T7	Cucsat.G12015.T7	mRNA
Cucsat.G12015.T6	Cucsat.G12015.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010104	regulation of ethylene-activated signaling pathway
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane