Cucsat.G11241 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G11241
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Trihelix transcription factor GT-2
Location	ctg1780: 1027717 .. 1030925 (+)
RNA-Seq Expression	Cucsat.G11241
Synteny	Cucsat.G11241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAACCTTTTTACTTCGTCAATTTCACCCACCCGACACCCTCCCCGCCGCTAAATTTTACCACTTCTCACCTCACCCACCCCCCCCGATGGACCTCTTCACCGCCGACCACCGGATACCCACCTCCGACAACTTCCCTCAGCACGTTGCTCCATTTCCCGATCCCACCGACCTCCTCTACGCTGCTCCATCCTCTGTATTTCCCCCTACCGACATCATCAACCACCTCTCCAACCCTCCACCGCCGCCTCAGAAGCTCCGTCCCATCCGCTGCAACGGTAGGTCCCCTGCCGGTTCTCAGGCCGAAAACATCTTCGATGGAGCCCTAAGGAGTTTCCAATGCGTTTCTTCCTCGCCTGAGGGTGGTTTTTCTGGGGATCAGCTCTGTGTGGCTAATATTGACCCTTGTCAGTACTTCAACTCCTCTGCAAAAGATGAAAAGCCTGAAGTCAAGCATAATGGCAGCTTCGGCGATATCATTGCAAACGATTACTTCTCCGAGGAAGAGACGAAGAACGGCGGATCCGGTGCTGCTATTGCTGCGGAGAATTTGAGCCGGAGCCGTGAAGAACCTCAATTGGACGACGATTCGTGGTGAGTTTTTACTCTGAACTTTACAAACGCTTCAAGAATTGAGGGTTTTTGTTCTTCAATTGAACTATTCAATTTTATTTACTTTAATTATTCATAATATTATATATATTCTTAAGAGTTATTGGGTGTCTGAGATTTGTTTAGGAAATGGCAATTGTATTGTGTTGGTGACCTCTGAATTCTTATGGAAAGGTAAGAGGATTAAAGAAAAGCTTCCCTGTAAAGTGATTCTTATAATATGTGAAAAAGAAATTGTTCTTTCAGTTTTGTCACTTCCTTGGCCTCTCTTCATTCTAAATTTGTTTAATTTCTTTTATTTCTAAGAAGAAAAAACTGAAAAAAAATTATTTTATTAATTATTTCAACAAAATTTTCATGTATTACTTTCATCCTTTAGGTCTCGCTCTCTTTCTCCTTAAAATGGAATAAAAGAATTGGAAATTCTAATAGGAGAAACTTTTTCTCTTTTATTCACTATTAACTATTAAGTGAAATGAAAAGAGAAAAAAAAGAAAGAAATACAAACAGGAGATTCCCAAAATGTCACCAATAGCATTAATAAGAAGAAGAAGTAATTTTACAAAAACTCCTTTTAGAGAGTGCATAAAATTGAAGTAAGAAAATGACAAGGTCAACAGAGTAATAAAAGATTCTTCTTTTTCTCTCCTTTTAAAAAGTTCCCATCTCTAGCAATCATCATAATGTCCCAGAAAATTTTAGCTTTCCTTTTGAAGGAAAGAGATCATTCAAAATGGATTTGTACAAAAGAGTTCAGGACTACTTAATGCTTGTTTGAGAATTATGGTAATCAGTTGTCTCTTTAAACTGATAATAGGAGCAATCAAAAGACACAAAACTAAGACGAGAGTTGAAAGAAGAGGTGAGGACAGGAAGAAACGTTGTACATCAACCTCCTTTGTATTGTATTGGATATCAAATGTAGAAGTGCAAGAATCTGTCTTCCATTTCAAAACTGTTGACATTTGATTCTTGAAAGTTGAAATCTTGTGAATTGCTTTTGGTCCTTGCTAAATGAAGCATTTTCTGATGCTTGTATGGTTAGTCATGGTTTTTCTTTTTGTTGTGTCACTTGCTGATACTGTGGCACTGGGTTTAGGATCGAGTGAATTGAACAGAAAGTTCCTGATCTTACTTCTGATATGAGGATCTTTTGTCATTGCAGTAGTTTGAGACTCGGGACCATTTCTTTTGTTTTACTTTTTTTTTTTTTTCTGAAAGAAAACCTAAAGTTTTATTGATTAATGAAGAAGTTATAAAATTCATAAAAGCCAAAATTTCACTTTAGAAGAGTATAACCTCTTCCGATTAGAAAACAATGTCTATGAAAAAAGAAATAAAGAAAACAAGAGAAATTGGCCTCCTTTGTTCCTCATCAATCTTTTCGCTTCCAGATAAACCAATCCAAATTACTGCTTCCTTTAGAAATTTACCTCCTTTTCTTCCTGCAACTAGAAAACAATGTTGATGCATGCCTTATTTGTTAGAGTATTCAGTAATCTGGTTTATTTTGAAATTTTCATTTGATGATTGATATTTACCCCTTTTGAACTGGTAACCTTCACAAAACATTGAAGATCTTCTTCCAAGTTCCACCATTAACTCTACCTTTTTGGCTTCCAAATTATTAGCTCCCTTGCAAGGCTGAAAGTATCCTGCTCTTTCCCAATGTACCTATCCTTAAAAGTCTCTATGTAAAATTGGAAAATTTTCTCATGGCTGCTTGCTCTACTGCTGAAAACAAGCTTAACGCAAGTTGTTCCACGGAATTCCTTGGCTTTAAAGCGTTAAGTATTTAAAACAAACACAGCAGCTTATGTTATCATGATTGAAAGTTTTATGAGACCAAATAAGTAGTGGCACGGCATGATGCATGCATAGATACATAGGGTATATATAGTGCAACAATTAATGACAAATCTCTTGATTACTTGTTTCCAGCTCAACTTCAGATGGTGGTGATGCTGTTTTTAGCAGCAAAAAGCATTTAAGCCATAAGAGAAAGAGAACAAGAAGGTCACTCGAGCATTTTGTGGAAAAATTGGTAATGAAGGTAATGGATAAGCAGGAGGAGATGCATAGGCAGTTAATAGATATGATAGAAAAGAAGGAGAACGAGAGAACAGTAAGAGAAGAAGCTTGGAAGCAGAGAGAGATTGAAAGAATTAAAAGGGATGAGGAGTTAAGAGCCCAAGAAACCTCTCGCAGTTTAGCAATTATTTCCTTGATCCAAAATTTGCTGGGCCATGAAATTCAAATCTCCCGACCAGCAGAAAATCAATGTGCAGAAGATGATGGAGGTGAAAGCAGCATCCAGAAGGAGCTAAAATGTGATCCAAGTGGAAGGAGATGGCCTCAGGCCGAAGTACAATCTTTGATATCACTTCGAACGTCACTGGAACATAAATTCCGTGCTACAGGCTCAAAAGGATCGATATGGGAGGAGATATCAATTGAGATGCAGAAGATGGGTTACAAGCGTTCAGCAAAGAAGTGCAAAGAAAAATGGGAAAATATGAACAAATATTTCAAAAGGACCGTTGTAACTGGGAAGGCTAGTATTGCAAATGGTAAGACATGTCCATATTTTCAAGAATTAGATATTCTTTATAGAAACGGAGTGGTAAATACTGGAGCTGTCTTTGATAGTACAAATACTGAAAATAATTCCAATGCCGAAAGAAGTATAGATCCTTTTCATGAAGATGCTTTTGTAGAAGGTGAAAGAGAGCATATAAAACAGGAGGAGGCATTGGACATGGTACAATTCTAAAAAAGAGATTTTAAGTACACTAAAGATCCCTTCGGTTGATTTTTGCAGCCCATATTTATGATAATGCAGATTCTTCATGTTTACTCTTAATCTATTCATGGTTGATTTCCCGGTGGGCTCGCTTTTTGGAATATGTTCCAGACATTTGTGCCCCTATAGTGACCAAAAGAAATGTCAAGTTTTCAGTTCGATGTCAGCAGGAAATGAGGGAGTAGATTGAGGAGATACTTGAATCAAGTTTCTGAGCTGATGATGCTTGAAATTCTTGTAAGTAAATGGATAGTAGTTGAAGACATGTCATCTTTCTTCCTATGGATTTTAATTTATCTGGTTATTGAATTAGTTAGTTTGTAAGAGGAATACGTCGATATTCTGAATTCTCCAACAATTTCTTTAACTAAGGTTAGTTCTTGACATCAAATGATTTCGTGATATATCTTCTACTGGTAGCTCTGATCTGAAATGTCATTTACAATGTATATGTGTGTGTATGTTATAATAAGTCTTAACAGTATTTGCTGCTGATGATGATTAGTTCTTAAAAAAATTGCTCTAATTCTTTAATTCCGAATTTTCTTTTCAAATACTA

Coding sequence (CDS)

TTAACCTTTTTACTTCGTCAATTTCACCCACCCGACACCCTCCCCGCCGCTAAATTTTACCACTTCTCACCTCACCCACCCCCCCCGATGGACCTCTTCACCGCCGACCACCGGATACCCACCTCCGACAACTTCCCTCAGCACGTTGCTCCATTTCCCGATCCCACCGACCTCCTCTACGCTGCTCCATCCTCTGTATTTCCCCCTACCGACATCATCAACCACCTCTCCAACCCTCCACCGCCGCCTCAGAAGCTCCGTCCCATCCGCTGCAACGGTAGGTCCCCTGCCGGTTCTCAGGCCGAAAACATCTTCGATGGAGCCCTAAGGAGTTTCCAATGCGTTTCTTCCTCGCCTGAGGGTGGTTTTTCTGGGGATCAGCTCTGTGTGGCTAATATTGACCCTTGTCAGTACTTCAACTCCTCTGCAAAAGATGAAAAGCCTGAAGTCAAGCATAATGGCAGCTTCGGCGATATCATTGCAAACGATTACTTCTCCGAGGAAGAGACGAAGAACGGCGGATCCGGTGCTGCTATTGCTGCGGAGAATTTGAGCCGGAGCCGTGAAGAACCTCAATTGGACGACGATTCGTGCTCAACTTCAGATGGTGGTGATGCTGTTTTTAGCAGCAAAAAGCATTTAAGCCATAAGAGAAAGAGAACAAGAAGGTCACTCGAGCATTTTGTGGAAAAATTGGTAATGAAGGTAATGGATAAGCAGGAGGAGATGCATAGGCAGTTAATAGATATGATAGAAAAGAAGGAGAACGAGAGAACAGTAAGAGAAGAAGCTTGGAAGCAGAGAGAGATTGAAAGAATTAAAAGGGATGAGGAGTTAAGAGCCCAAGAAACCTCTCGCAGTTTAGCAATTATTTCCTTGATCCAAAATTTGCTGGGCCATGAAATTCAAATCTCCCGACCAGCAGAAAATCAATGTGCAGAAGATGATGGAGGTGAAAGCAGCATCCAGAAGGAGCTAAAATGTGATCCAAGTGGAAGGAGATGGCCTCAGGCCGAAGTACAATCTTTGATATCACTTCGAACGTCACTGGAACATAAATTCCGTGCTACAGGCTCAAAAGGATCGATATGGGAGGAGATATCAATTGAGATGCAGAAGATGGGTTACAAGCGTTCAGCAAAGAAGTGCAAAGAAAAATGGGAAAATATGAACAAATATTTCAAAAGGACCGTTGTAACTGGGAAGGCTAGTATTGCAAATGGTAAGACATGTCCATATTTTCAAGAATTAGATATTCTTTATAGAAACGGAGTGGTAAATACTGGAGCTGTCTTTGATAGTACAAATACTGAAAATAATTCCAATGCCGAAAGAAGTATAGATCCTTTTCATGAAGATGCTTTTGTAGAAGGTGAAAGAGAGCATATAAAACAGGAGGAGGCATTGGACATGGTACAATTCTAA

Protein sequence

LTFLLRQFHPPDTLPAAKFYHFSPHPPPPMDLFTADHRIPTSDNFPQHVAPFPDPTDLLYAAPSSVFPPTDIINHLSNPPPPPQKLRPIRCNGRSPAGSQAENIFDGALRSFQCVSSSPEGGFSGDQLCVANIDPCQYFNSSAKDEKPEVKHNGSFGDIIANDYFSEEETKNGGSGAAIAAENLSRSREEPQLDDDSCSTSDGGDAVFSSKKHLSHKRKRTRRSLEHFVEKLVMKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISLIQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHKFRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPYFQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQF

Homology

[Close]

BLAST of Cucsat.G11241 vs. ExPASy Swiss-Prot
Match: Q9C882 (Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 3.0e-35
Identity = 93/255 (36.47%), Postives = 133/255 (52.16%), Query Frame = 0


Query: 2   KVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQE----TSRSLAI 61
           +VM KQ  M R  ++ +EK+E ER  REEAWK++E+ R+ R+ E+ +QE     SR  AI
Sbjct: 276 QVMQKQAAMQRSFLEALEKREQERLDREEAWKRQEMARLAREHEVMSQERAASASRDAAI 335

Query: 62  ISLIQNLLGHEIQI-----SRP-------------------------------------- 121
           ISLIQ + GH IQ+     S+P                                      
Sbjct: 336 ISLIQKITGHTIQLPPSLSSQPPPPYQPPPAVTKRVAEPPLSTAQSQSQQPIMAIPQQQI 395

Query: 122 -------------AENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHKF 181
                         E +  +    E  +  E    PS  RWP+AE+ +LI+LR+ +E ++
Sbjct: 396 LPPPPPSHPHAHQPEQKQQQQPQQEMVMSSEQSSLPSSSRWPKAEILALINLRSGMEPRY 455

Query: 182 RATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPYF 197
           +    KG +WEEIS  M++MGY R+AK+CKEKWEN+NKY+K+   + K    + KTCPYF
Sbjct: 456 QDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKYYKKVKESNKKRPQDAKTCPYF 515

[Close]

BLAST of Cucsat.G11241 vs. ExPASy Swiss-Prot
Match: Q9C6K3 (Trihelix transcription factor DF1 OS=Arabidopsis thaliana OX=3702 GN=DF1 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33
Identity = 85/235 (36.17%), Postives = 129/235 (54.89%), Query Frame = 0


Query: 2   KVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRS----LAI 61
           +V+DKQEE+ R+ ++ +EK+E+ER VREE+W+ +EI RI R+ E+ AQE S S     A+
Sbjct: 264 QVVDKQEELQRKFLEAVEKREHERLVREESWRVQEIARINREHEILAQERSMSAAKDAAV 323

Query: 62  ISLIQNL-------------------------------------------LGHEIQISRP 121
           ++ +Q L                                           L   IQ    
Sbjct: 324 MAFLQKLSEKQPNQPQPQPQPQQVRPSMQLNNNNQQQPPQRSPPPQPPAPLPQPIQAVVS 383

Query: 122 AENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHKFRATGSKGSIWEEI 181
             +    D+GG+ ++        S  RWP+ E+++LI LRT+L+ K++  G KG +WEEI
Sbjct: 384 TLDTTKTDNGGDQNMTP--AASASSSRWPKVEIEALIKLRTNLDSKYQENGPKGPLWEEI 443

Query: 182 SIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPYFQELDILYR 190
           S  M+++G+ R++K+CKEKWEN+NKYFK+   + K    + KTCPYF +LD LYR
Sbjct: 444 SAGMRRLGFNRNSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYR 496

[Close]

BLAST of Cucsat.G11241 vs. ExPASy Swiss-Prot
Match: Q39117 (Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-32
Identity = 80/214 (37.38%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 2   KVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEEL----RAQETSRSLAI 61
           ++M+KQE+M ++ ++ +E +E ER  REEAW+ +EI RI R+ E     R+   ++  AI
Sbjct: 271 ELMEKQEKMQKRFLETLEYREKERISREEAWRVQEIGRINREHETLIHERSNAAAKDAAI 330

Query: 62  ISLIQNLLGHEIQ-----ISRPAENQCAEDDGGESSIQKELKC----------------- 121
           IS +  + G + Q       +P++ +  + D   +   KE +                  
Sbjct: 331 ISFLHKISGGQPQQPQQHNHKPSQRKQYQSDHSITFESKEPRAVLLDTTIKMGNYDNNHS 390

Query: 122 -DPSGRRWPQAEVQSLISLRTSLEHKFRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKW 181
             PS  RWP+ EV++LI +R +LE  ++  G+KG +WEEIS  M+++GY RSAK+CKEKW
Sbjct: 391 VSPSSSRWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMRRLGYNRSAKRCKEKW 450

Query: 182 ENMNKYFKRTVVTGKASIANGKTCPYFQELDILY 189
           EN+NKYFK+   + K    + KTCPYF +L+ LY
Sbjct: 451 ENINKYFKKVKESNKKRPLDSKTCPYFHQLEALY 484

[Close]

BLAST of Cucsat.G11241 vs. ExPASy Swiss-Prot
Match: Q8H181 (Trihelix transcription factor GTL2 OS=Arabidopsis thaliana OX=3702 GN=At5g28300 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-26
Identity = 95/299 (31.77%), Postives = 142/299 (47.49%), Query Frame = 0


Query: 6   KQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQE----TSRSLAIISLI 65
           +QEEMH++L++ + KKE E+  REEAWK++EIER+ ++ E+RAQE    + R+  II  I
Sbjct: 313 QQEEMHKKLLEDMVKKEEEKIAREEAWKKQEIERVNKEVEIRAQEQAMASDRNTNIIKFI 372

Query: 66  QNLLGHEIQI-------SRPAENQCAEDDGGESSIQ------------------------ 125
                H++ +       S+ + +       G    Q                        
Sbjct: 373 SKFTDHDLDVVQNPTSPSQDSSSLALRKTQGRRKFQTSSSLLPQTLTPHNLLTIDKSLEP 432

Query: 126 -------------KELKCDPS---GRRWPQAEVQSLISLRTSL------EHKFR---ATG 185
                        K  K D     G+RWP+ EV +LI++R S+      +HK     +T 
Sbjct: 433 FSTKTLKPKNQNPKPPKSDDKSDLGKRWPKDEVLALINIRRSISNMNDDDHKDENSLSTS 492

Query: 186 SKG-SIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPYFQEL 232
           SK   +WE IS +M ++GYKRSAK+CKEKWEN+NKYF++T    K    + +TCPYF +L
Sbjct: 493 SKAVPLWERISKKMLEIGYKRSAKRCKEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQL 552

[Close]

BLAST of Cucsat.G11241 vs. ExPASy Swiss-Prot
Match: Q9LZS0 (Trihelix transcription factor PTL OS=Arabidopsis thaliana OX=3702 GN=PTL PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15
Identity = 45/111 (40.54%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 101 RWPQAEVQSLISLRTSLEHKFRATGSKGSIWEEIS-IEMQKMGYKRSAKKCKEKWENMNK 160
           RWP+ E  +L+ +R+ L+HKF+    KG +W+E+S I  ++ GY+RS KKC+EK+EN+ K
Sbjct: 119 RWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYK 178

Query: 161 YFKRTVVTGKASIANGKTCPYFQELDILYRNGVVNTGAVFDSTNTENNSNA 211
           Y+++T   GKA   +GK   +F++L+ LY  G  N      + NT+  S+A
Sbjct: 179 YYRKT-KEGKAGRQDGKHYRFFRQLEALY--GDSNNLVSCPNHNTQFMSSA 226

[Close]

BLAST of Cucsat.G11241 vs. NCBI nr
Match: XP_031745941.1 (trihelix transcription factor GTL1-like [Cucumis sativus])

HSP 1 Score: 468 bits (1203), Expect = 3.10e-165
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 60
           MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL
Sbjct: 45  MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 104

Query: 61  IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 120
           IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK
Sbjct: 105 IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 164

Query: 121 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 180
           FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY
Sbjct: 165 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 224

Query: 181 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ 240
           FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ
Sbjct: 225 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ 284

[Close]

BLAST of Cucsat.G11241 vs. NCBI nr
Match: XP_004139609.1 (trihelix transcription factor GT-2 [Cucumis sativus])

HSP 1 Score: 468 bits (1203), Expect = 8.86e-163
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 60
           MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL
Sbjct: 205 MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 264

Query: 61  IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 120
           IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK
Sbjct: 265 IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 324

Query: 121 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 180
           FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY
Sbjct: 325 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 384

Query: 181 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ 240
           FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ
Sbjct: 385 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ 444

[Close]

BLAST of Cucsat.G11241 vs. NCBI nr
Match: KAE8637356.1 (hypothetical protein CSA_011906 [Cucumis sativus])

HSP 1 Score: 462 bits (1188), Expect = 1.87e-160
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 60
           MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL
Sbjct: 177 MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 236

Query: 61  IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 120
           IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK
Sbjct: 237 IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 296

Query: 121 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 180
           FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY
Sbjct: 297 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 356

Query: 181 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDM 238
           FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDM
Sbjct: 357 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDM 414

[Close]

BLAST of Cucsat.G11241 vs. NCBI nr
Match: KGN65064.2 (hypothetical protein Csa_022797 [Cucumis sativus])

HSP 1 Score: 462 bits (1188), Expect = 1.05e-157
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 60
           MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL
Sbjct: 205 MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 264

Query: 61  IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 120
           IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK
Sbjct: 265 IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 324

Query: 121 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 180
           FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY
Sbjct: 325 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 384

Query: 181 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDM 238
           FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDM
Sbjct: 385 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDM 442

[Close]

BLAST of Cucsat.G11241 vs. NCBI nr
Match: KAA0035695.1 (trihelix transcription factor GT-2 [Cucumis melo var. makuwa])

HSP 1 Score: 451 bits (1159), Expect = 4.31e-156
Identity = 231/241 (95.85%), Postives = 236/241 (97.93%), Query Frame = 0


Query: 1   MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 60
           +KVM KQEEMHRQLIDMIE+KE ERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL
Sbjct: 205 LKVMHKQEEMHRQLIDMIERKEKERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 264

Query: 61  IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 120
           IQNLLG+EIQISRP ENQC EDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK
Sbjct: 265 IQNLLGNEIQISRPVENQCTEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 324

Query: 121 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 180
           FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRT+VTGKASIANGKTCPY
Sbjct: 325 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASIANGKTCPY 384

Query: 181 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ 240
           FQELDILYRNGVVNTGAVFDSTNTENNS AERSIDPFHEDAFVEGEREHIKQE+ALDMVQ
Sbjct: 385 FQELDILYRNGVVNTGAVFDSTNTENNSKAERSIDPFHEDAFVEGEREHIKQEQALDMVQ 444

[Close]

BLAST of Cucsat.G11241 vs. ExPASy TrEMBL
Match: A0A0A0LYK7 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181390 PE=4 SV=1)

HSP 1 Score: 468 bits (1203), Expect = 4.29e-163
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 60
           MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL
Sbjct: 205 MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 264

Query: 61  IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 120
           IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK
Sbjct: 265 IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 324

Query: 121 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 180
           FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY
Sbjct: 325 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 384

Query: 181 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ 240
           FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ
Sbjct: 385 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ 444

[Close]

BLAST of Cucsat.G11241 vs. ExPASy TrEMBL
Match: A0A5A7T2L2 (Trihelix transcription factor GT-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G003980 PE=4 SV=1)

HSP 1 Score: 451 bits (1159), Expect = 2.09e-156
Identity = 231/241 (95.85%), Postives = 236/241 (97.93%), Query Frame = 0


Query: 1   MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 60
           +KVM KQEEMHRQLIDMIE+KE ERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL
Sbjct: 205 LKVMHKQEEMHRQLIDMIERKEKERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 264

Query: 61  IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 120
           IQNLLG+EIQISRP ENQC EDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK
Sbjct: 265 IQNLLGNEIQISRPVENQCTEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 324

Query: 121 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 180
           FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRT+VTGKASIANGKTCPY
Sbjct: 325 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASIANGKTCPY 384

Query: 181 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ 240
           FQELDILYRNGVVNTGAVFDSTNTENNS AERSIDPFHEDAFVEGEREHIKQE+ALDMVQ
Sbjct: 385 FQELDILYRNGVVNTGAVFDSTNTENNSKAERSIDPFHEDAFVEGEREHIKQEQALDMVQ 444

[Close]

BLAST of Cucsat.G11241 vs. ExPASy TrEMBL
Match: A0A6J1KGX3 (trihelix transcription factor GT-2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495665 PE=4 SV=1)

HSP 1 Score: 402 bits (1032), Expect = 4.30e-137
Identity = 211/244 (86.48%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 60
           MKVM+KQEEMHRQLIDMIEK E ER VREEAWKQREIER++RDEELRAQETSRSLAIIS 
Sbjct: 205 MKVMNKQEEMHRQLIDMIEKNEKERIVREEAWKQREIERMRRDEELRAQETSRSLAIISF 264

Query: 61  IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 120
           IQNLLGHEIQIS+P EN C EDDGGESSIQKELK DPS RRWP+AEVQSLISLRTSLEHK
Sbjct: 265 IQNLLGHEIQISQPVENHCTEDDGGESSIQKELKSDPSSRRWPRAEVQSLISLRTSLEHK 324

Query: 121 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 180
           FRATGSKGSIWEEIS+EMQK+GY RSAKKCKEKWENMNKYFKRT+ TGKASIANGKTCPY
Sbjct: 325 FRATGSKGSIWEEISVEMQKVGYNRSAKKCKEKWENMNKYFKRTIGTGKASIANGKTCPY 384

Query: 181 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHED-AFVEGE--REHIKQEEALD 240
           FQELD LYRNGVVN+GAV DST+TE+NS AERSIDPFHED AFV+GE  REH+KQE AL+
Sbjct: 385 FQELDTLYRNGVVNSGAVIDSTSTEHNSQAERSIDPFHEDEAFVQGESEREHVKQE-ALE 444

[Close]

BLAST of Cucsat.G11241 vs. ExPASy TrEMBL
Match: A0A6J1ENL8 (trihelix transcription factor GT-2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434194 PE=4 SV=1)

HSP 1 Score: 398 bits (1022), Expect = 1.42e-135
Identity = 209/244 (85.66%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 60
           MKVMDKQEEMHRQLIDMIEK E ER VREEAWKQREIER++RDEELRAQETSRSLAIIS 
Sbjct: 205 MKVMDKQEEMHRQLIDMIEKNEKERIVREEAWKQREIERMRRDEELRAQETSRSLAIISF 264

Query: 61  IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 120
           IQNLLGHEIQIS+P EN C EDDGGESSIQKELK DPS RRWP+AEVQSLISLRTSLEHK
Sbjct: 265 IQNLLGHEIQISQPVENHCTEDDGGESSIQKELKSDPSSRRWPRAEVQSLISLRTSLEHK 324

Query: 121 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 180
           FRATGSKGSIWEEIS+EM K+GY RSAKKCKEKWENMNKYFKRT+ TGKASIANGKTCPY
Sbjct: 325 FRATGSKGSIWEEISVEMHKVGYNRSAKKCKEKWENMNKYFKRTIGTGKASIANGKTCPY 384

Query: 181 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHED-AFVEGE--REHIKQEEALD 240
           FQELD LYRNGVVN+GAV DST+TE+NS AERSIDPFHE+ AFV+GE  REH+KQE AL+
Sbjct: 385 FQELDTLYRNGVVNSGAVIDSTSTEHNSQAERSIDPFHEEEAFVQGESEREHVKQE-ALE 444

[Close]

BLAST of Cucsat.G11241 vs. ExPASy TrEMBL
Match: A0A5D3E5I0 (Trihelix transcription factor GT-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00480 PE=4 SV=1)

HSP 1 Score: 387 bits (995), Expect = 6.37e-132
Identity = 204/241 (84.65%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 1   MKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREIERIKRDEELRAQETSRSLAIISL 60
           +KVM KQEEMHRQ                             DEELRAQETSRSLAIISL
Sbjct: 205 LKVMHKQEEMHRQ-----------------------------DEELRAQETSRSLAIISL 264

Query: 61  IQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 120
           IQNLLG+EIQISRP ENQC EDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK
Sbjct: 265 IQNLLGNEIQISRPVENQCTEDDGGESSIQKELKCDPSGRRWPQAEVQSLISLRTSLEHK 324

Query: 121 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTVVTGKASIANGKTCPY 180
           FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRT+VTGKASIANGKTCPY
Sbjct: 325 FRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKASIANGKTCPY 384

Query: 181 FQELDILYRNGVVNTGAVFDSTNTENNSNAERSIDPFHEDAFVEGEREHIKQEEALDMVQ 240
           FQELDILYRNGVVNTGAVFDSTNTENNS AERSIDPFHEDAFVEGEREHIKQE+ALDMVQ
Sbjct: 385 FQELDILYRNGVVNTGAVFDSTNTENNSKAERSIDPFHEDAFVEGEREHIKQEQALDMVQ 416

The following BLAST results are available for this feature:

BLAST of Cucsat.G11241 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C882	3.0e-35	36.47	Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 ...	[more]
Q9C6K3	1.2e-33	36.17	Trihelix transcription factor DF1 OS=Arabidopsis thaliana OX=3702 GN=DF1 PE=4 SV...	[more]
Q39117	1.8e-32	37.38	Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 ...	[more]
Q8H181	1.9e-26	31.77	Trihelix transcription factor GTL2 OS=Arabidopsis thaliana OX=3702 GN=At5g28300 ...	[more]
Q9LZS0	1.5e-15	40.54	Trihelix transcription factor PTL OS=Arabidopsis thaliana OX=3702 GN=PTL PE=1 SV...	[more]

BLAST of Cucsat.G11241 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745941.1	3.10e-165	100.00	trihelix transcription factor GTL1-like [Cucumis sativus]	[more]
XP_004139609.1	8.86e-163	100.00	trihelix transcription factor GT-2 [Cucumis sativus]	[more]
KAE8637356.1	1.87e-160	100.00	hypothetical protein CSA_011906 [Cucumis sativus]	[more]
KGN65064.2	1.05e-157	100.00	hypothetical protein Csa_022797 [Cucumis sativus]	[more]
KAA0035695.1	4.31e-156	95.85	trihelix transcription factor GT-2 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G11241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYK7	4.29e-163	100.00	Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181390 PE...	[more]
A0A5A7T2L2	2.09e-156	95.85	Trihelix transcription factor GT-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A6J1KGX3	4.30e-137	86.48	trihelix transcription factor GT-2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1ENL8	1.42e-135	85.66	trihelix transcription factor GT-2 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3E5I0	6.37e-132	84.65	Trihelix transcription factor GT-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	GENE3D	1.10.10.60		coord: 102..163 e-value: 7.5E-23 score: 82.4
None	No IPR available	PANTHER	PTHR21654:SF7	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	coord: 1..209
None	No IPR available	PANTHER	PTHR21654	FAMILY NOT NAMED	coord: 1..209
None	No IPR available	CDD	cd12203	GT1	coord: 100..164 e-value: 3.55582E-26 score: 95.0395
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 98..160 e-value: 0.0089 score: 25.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 101..158 score: 6.945622
IPR044822	Myb/SANT-like DNA-binding domain 4	PFAM	PF13837	Myb_DNA-bind_4	coord: 100..185 e-value: 4.4E-20 score: 71.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G11241.T1	Cucsat.G11241.T1	mRNA
Cucsat.G11241.T3	Cucsat.G11241.T3	mRNA
Cucsat.G11241.T4	Cucsat.G11241.T4	mRNA
Cucsat.G11241.T7	Cucsat.G11241.T7	mRNA
Cucsat.G11241.T2	Cucsat.G11241.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0072546	EMC complex