Cucsat.G11120 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G11120
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	RecQ-mediated genome instability protein 1
Location	ctg1740: 594948 .. 598031 (-)
RNA-Seq Expression	Cucsat.G11120
Synteny	Cucsat.G11120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAACCCCTAAATTTGGTTTCTTAAAAAAAGAAAAATGAAAAAGGAATGAATGGAAGAATTTGTGTTATGAAAATTTAGGGGTTACTTGAGATGAGAATGAGAAAGACATTTGTGCGATTCTACTTCCCTTCTACTGCACACATCAGGTGGAGGGAAGAAGGCCCAAAATTCAGAGTGAAGGAGGGAAGCCACAATGACAAGAAGGCGCCTTCGCCTGAGCTGGTCTTCCGACGAAGACTTGGAACAAGACTCTCACTGCCCTGATTCCTCCCCGACCTCCCTTCAACCAATCATTCTCGACAACCTCAACTCTCATTTTAATCCCAACGTTTCTGAACCCGTCCAAGTTCCCGATTCCGACGACGACGAACAACATTTTATCGACGTCTCCGACCATCTCTCCCCTCCTTCTCCGGATTCTGATCATTCTCTCCCTCACTCCCCCGACCTCAATCCGCTCATTCCTGGTCTCGTTTCCACTCACCCCCCGTGTCCTGTAAGTGACTTCCTTCGGGGACTTGGCTTAAGCTTGAAGAGAGAGTGGTTGGATGCCTGTATCCGCTCTCTACAAGGGTCTGTACCAGGTTTCTTCAGCCTCAACCATTCGGAGAAAGGAAAGCTGTGTTTCGAGCAGTTTTTGGTTTCTGATATGAATTATGTGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTCGTTGACCTCCCTGGTCCGTACGTACTGCAGGTTATTTGTGCTAGTTCCTTGAGTTTATACCCATGAATTTCTTTTTGGTTATGATATCATTTTGGTCACTGTATGAAATTTCAGAGGTTATAAGAATGACCTGCTGCTTGAGGTGGGCAAGGTTGTAGAGTCCTAGCTGAATTGTTTTCCTTTTCAGGTCGATGAAATAGTTAACATCAGTTGTGCTCTGAAAGGTAGATATCAGACTGCCCCTGCTAATATTAAGAGGTGCCTTAAACTGTCAATGACGGATGGTGTTCAACGAATTTTTGGGATGGAATACAGACCTATTAAGAATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTTGCTTATCTTTCTCAATCCTCGATCAATTATTCTCTTTTTTCGTCAACCAGGTTTATGTGCTTCGAAACTAGTAGATTAGTTGATGCTAGGGATCAATTATTTATAGCTTTTGTGCAGGTAGTAATCAGCAATGTAAGTGTACGACGTGGGCTTCTAATGCTAGTACCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGCAGGTATTATTAATGCCTAGATTACATAGTTTTCATCCATTCCTTTCTTTGTTGGGTTCCATAGTACAATTTTCTGTGTCCACTATCCAAGGAAGACTTCAAACTTGCGTTTTTGCACAGTTATTTTTTGGTGGACTTTGTCTTTCTTTTCAGAAGAGCTTATCATAGGAACATCATATCTTCTGCTGTTTTCTGGTATTCAATAATTTGTGATTTGTATACTTTGTTCAGAACGAGAACAGGCGTAGTTCCTTCTTTGGCAAGTAGAGCAACACGTGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATCCTAGTAGAATGGTGGATGCTGAACCCTCTCATTCAAACCAAGGTACTAATCGGTTAAAATTTCCACGTTCTTTCTTTCCGGGCGAAAAGGAAACTTTTTTTTACGTTGCCAACTGGATATTCAGTGTGTCAGATTCCTGGAGACCAATTAGCTGCTACCAGTCTCTATCTTGGGCAATGTTGCCTAATTTCATTCTTCCATCATGTGCATTTTTCGTTCTCCTGTTTTTCTTTAACTATTGATACAAACCGTAGTGGGGAGAAACAGGGATACGACAAGATAACAAAATATGGAAGTGGAAGGGAAATGCCTGTTCACTCTTAATATTATAACTAAATAACTAATTTATTCTGGAATGAAAAAAATTATAAACTTCAAAGTAGGAAGACGACAACTCCTACTAGAATCTGATGTAAATTCCATGGTCTAGTAAAATTATTTGAATATGAAGCCTAATGTTTATCTGAATATAAAAAGATACACAATTGCACAAGGCATTTGATATTTTCCAATAGATTAGCCAAGAATGTCAGCCAAGTTTATAGTGGATGTTTTTTCTTTTATTATTTTTTTGGTCTTGAATTTTATGTTCAATCTGTGTAAACTGGAAAGAGCTCTGTTGTTTAGATAGTGCATCACCAAATTTTCTTTGTTTTTTGGTCTTGACTATCAGGTGCTCGCATGTTCCATAGGGGAAATGAAGCATTTACTGCTCCGGTTGCTGATGCATTTACTACACCAGTCAGTAGAACAAATGCTAATTCTGAGCTATCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCATTCTCATTCCATTCCCAGTGGTAGAGCTCATACTGAGCCTACTATTGTGCCCAATTCGGTAGAGGACTCCAGTGTGGTCAATTCAGTGGACAATACCAATATGGGCAATTCAGTAGACGATTCCAATGCAGTCAACTCGGTAGAGGATACCATCATGGTCGACATCGAGCATCCTCTCATTTTATCTGGCGATAGAGAAATTCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGCGAAGGATAAGTCTCCATTAGTTCGGGGAAGAATCAAGGTGGGATAAAAATTCATATTTCTTTACTAGAGGACTAACGCTAACACTTCTTGTTCCAAATGAAAGCAGGGCATTTTTGTTTGTTTGTTTGTAAGCTCCCTACTTGAACAAGATTTGTTCTATGCCCTTGAGTTCTGAAGCTTGTTCATCCTGAAAGCTTAGAATTTATTTCATCAATCCACTGGTCAGATTGATTATTTGTTGGGTCAGGTAACTAACTCGTAATTAATACGGTCAACGTATGTGCAACTTACAGCAGTATTAGATGAATGTTCAGTCTCGTTCCTCTTTATCCCGAGTGGCACCGATGAGGGTAAGGAAATCCTATATGTGGATGACGTGTGGTGTCATAGTTATTATTGGAAGCATGGAGTTACACTTCTGGCTGATCAATATATAGAATTTGGAGCTTGGTTGTTCTAAGCATAATATTTGAAAAATCCGTTTTGTTCCTTTTGACTTAAGTGCTTGGAAACTGCTCATATTGATATACTGAGCATGGCATGGTGAATGAAAATAAAATTAAATGTAAACGGAATCTAATAGTTTCTGTACTTACTGAAATTGAGAACATAATCTTTGTATTTGTAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAAGCGAAGGACAAATTACGAGCTACGTGTGTATGTGGATGACGGCAGCCTCATTTCTGAGGTCCTCATTGATCACGAGGTGAGTCAAATACCGTACAGTTTACACGTACCCTAGTCAAAGAGAACCATATCCGACCGCTTCTTATGTTTGATTATTAGGTTGTGCAAAAAGCGATCGGCCATTCTCCAAAGGATGTTACGGACGCTATTGATTCTTCTGATGTCAAAGTAGTGAGTGCTATGAAGGAGACTTTGAGACAGTTTCAAATTTTCTTAATAAACTTTGAGGTAAACTGATGGCTTCAAGTATTTCTAACTACCAGTTATTGCTTCCTCCCGTCCCGCTAATTTCAAAAGATTATGCCTTTTCTGTATATTAATTGCATATTCTGTATACTTTGAGTTAATTTAAAAGCATTATTCTCTTATATGTTGTTTCATCGAAGGGTACAATGCTGGTTGAGATGAACAGAACGTCTCTTCTGCCAGTTGTCCTTGAGATGTCGGAGGGTTGTCTGGAATCTGATGCTCGGTTGCTCTTGAGAAGACTTGCGTGTTCAAATTCTGTTCCAACTGATGAACATGCCCGTATTATAGACGTATCCCCTTAATCGAAGGCAAGAAGAAAAATGTCTCAAGATCAACAATTTTTCAGCGAAGAAACTCATTTTTATCAGACTATCTTGGACCGGGGATCAAGGCAGTGAAGCTTCTCTGGAGCTACACAATCTCATTACCCAGTGACAAATGAAAAGAGCTTGATGGGCGACCCACAGATTCACATATGTTGTCAAACTGTTGATAATTGCAAGCGCGAGATCAATAAAACTTGAAATCAACGGTTTTATTGGCCATCAACATCCAGAGAAAACGAAGTCAGAGTTTCTCCTGGAAGTTTTACTCGGGCCATTTGTCAGGAGAGAGCCAAAACTGATCGAGATTGGTATTCCTCTATCATGTCAACATCTATGGCAAAGAGAATCAGAAGGCAACCAACCGTCGGTAGAAGGGCCGTGGCAAAGATTTTAGAAGATGCTATAAATGCTTCTACAACCAGCTCGGTGACATTCCATATTTATCAATTCTTTCAAACGTCATATATTGTTCAATATGTACATGCTCACTATAATTCTAGTTATGAAAAAGTACCCATGATTGGCACTATATGTCTCTAATGAGTTTGTTAGTTTGTCAATGTCAGAATGTAATACATTCTTTTGGTTCATTATTATTAGATTGCGGACAAATAACACAACCATTCTGCTCAACTACAACGTGGGATATTTTTACCCCGAAACGTAAGTTGATCCGTCACATTCAGGCAATTCCTTTCTCTTAAATTTCTAAGGAAGATT

Coding sequence (CDS)

ATGACAAGAAGGCGCCTTCGCCTGAGCTGGTCTTCCGACGAAGACTTGGAACAAGACTCTCACTGCCCTGATTCCTCCCCGACCTCCCTTCAACCAATCATTCTCGACAACCTCAACTCTCATTTTAATCCCAACGTTTCTGAACCCGTCCAAGTTCCCGATTCCGACGACGACGAACAACATTTTATCGACGTCTCCGACCATCTCTCCCCTCCTTCTCCGGATTCTGATCATTCTCTCCCTCACTCCCCCGACCTCAATCCGCTCATTCCTGGTCTCGTTTCCACTCACCCCCCGTGTCCTGTAAGTGACTTCCTTCGGGGACTTGGCTTAAGCTTGAAGAGAGAGTGGTTGGATGCCTGTATCCGCTCTCTACAAGGGTCTGTACCAGGTTTCTTCAGCCTCAACCATTCGGAGAAAGGAAAGCTGTGTTTCGAGCAGTTTTTGGTTTCTGATATGAATTATGTGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTCGTTGACCTCCCTGGTCCGTACGTACTGCAGGTCGATGAAATAGTTAACATCAGTTGTGCTCTGAAAGGTAGATATCAGACTGCCCCTGCTAATATTAAGAGGTGCCTTAAACTGTCAATGACGGATGGTGTTCAACGAATTTTTGGGATGGAATACAGACCTATTAAGAATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTAGTAATCAGCAATGTAAGTGTACGACGTGGGCTTCTAATGCTAGTACCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGCAGAACGAGAACAGGCGTAGTTCCTTCTTTGGCAAGTAGAGCAACACGTGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATCCTAGTAGAATGGTGGATGCTGAACCCTCTCATTCAAACCAAGGTGCTCGCATGTTCCATAGGGGAAATGAAGCATTTACTGCTCCGGTTGCTGATGCATTTACTACACCAGTCAGTAGAACAAATGCTAATTCTGAGCTATCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCATTCTCATTCCATTCCCAGTGGTAGAGCTCATACTGAGCCTACTATTGTGCCCAATTCGGTAGAGGACTCCAGTGTGGTCAATTCAGTGGACAATACCAATATGGGCAATTCAGTAGACGATTCCAATGCAGTCAACTCGGTAGAGGATACCATCATGGTCGACATCGAGCATCCTCTCATTTTATCTGGCGATAGAGAAATTCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGCGAAGGATAAGTCTCCATTAGTTCGGGGAAGAATCAAGGTGGGATAA

Protein sequence

MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQHFIDVSDHLSPPSPDSDHSLPHSPDLNPLIPGLVSTHPPCPVSDFLRGLGLSLKREWLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNTNMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKVG

Homology

[Close]

BLAST of Cucsat.G11120 vs. ExPASy Swiss-Prot
Match: Q5XUX6 (RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RMI1 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.5e-47
Identity = 144/350 (41.14%), Postives = 192/350 (54.86%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAW------PSDNVQEPG-HPSRMVDAEPSH--SNQGARMF--- 66
           RTR GVVPSL +RAT AAW        ++V + G H +       SH  +NQG  +    
Sbjct: 284 RTRVGVVPSLTTRATLAAWSLNGNDTGNHVHDTGNHVNSSASGNASHTQANQGIPVHVTR 343

Query: 67  -HRGNEAFTAPVADAFTTPVSRTNANSE------LSSNFVSNVEEIHSHSIPSGRAHTEP 126
            H  + A   P+A   +T V  T +  E       S++      +IHS S    RA +  
Sbjct: 344 THNSSRAMDEPLA---STNVGATVSRVEHMQIDTASAHGERTFSDIHSTSSNIHRAASTA 403

Query: 127 TIVPNSVEDSSVVNSVDNTNMGNSVDDSNAVNS-----------VEDT------------ 186
               +     S   S  N   GNS+D ++ V S           V DT            
Sbjct: 404 GTGTSCSGACSGARSFANNVGGNSLDQTSNVTSFVEEMHIDTGRVRDTTTHIYGSDSGGV 463

Query: 187 ------IMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQ 246
                 ++VD+E P +LS + E PFTYLA LS K A  KD    V+GRIKCFLTGVK FQ
Sbjct: 464 AAEFSNMVVDLEGPSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQ 523

Query: 247 FKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSA-MKETL 306
           FK+++ YEL  YVDDGSLI E+L+ ++VVQK IGHS  +VT A+ SS    ++A MKE L
Sbjct: 524 FKQQSTYELLCYVDDGSLICEILLHNDVVQKRIGHSSMEVTAALSSSAPTSLNAMMKEKL 583

Query: 307 RQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSN 308
           ++FQ+FL +FEG M+VEMNR+S  PV +EM++GC  +DARLLL R+  S+
Sbjct: 584 KRFQLFLADFEGIMVVEMNRSSQYPVAIEMNQGCSLTDARLLLDRIKSSS 630

[Close]

BLAST of Cucsat.G11120 vs. ExPASy Swiss-Prot
Match: Q7XRV0 (RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RMI1 PE=3 SV=2)

HSP 1 Score: 136.3 bits (342), Expect = 5.9e-31
Identity = 88/241 (36.51%), Postives = 143/241 (59.34%), Query Frame = 0


Query: 74  SRTNANSELSSNFV-SNVEE---------IHSHSIPSGRAHTEPTIVPNSVEDSSVV-NS 133
           +R  A+  +  +FV +NV E         +  H   S  +  E ++   S  DS +  + 
Sbjct: 562 TRAMADERVDPSFVGNNVHEQMQRVQGITMQDHISASSESKRELSVTTPSGYDSRLAPHG 621

Query: 134 VDNTNMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPL 193
           V NT  G    ++   ++V+D I  +I HP+ L G+ E PFTY+ ++ A     +D  P 
Sbjct: 622 VGNT--GTRSGEATRSSNVDDGIN-NIGHPISLCGENEKPFTYIFNMLADWGVQQDTVPY 681

Query: 194 VRGRIKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAI 253
           ++G+IK  +T VK FQ+K+   Y+L VY+DDGS I+E  +D ++VQ  IG S +++  A+
Sbjct: 682 IQGKIKGLITSVKRFQYKQSMQYDLYVYIDDGSFITEAFVDRDIVQNMIGLSAEELAAAL 741

Query: 254 DSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRR 304
            SS     + +++T++ F+ FL+NFEGT+L+E+NR S +P+V EM++GC  SDA  LLRR
Sbjct: 742 -SSGGPAQANIRKTMKAFEHFLVNFEGTILIELNRDSSVPIVREMNKGCSSSDAWQLLRR 798

[Close]

BLAST of Cucsat.G11120 vs. NCBI nr
Match: XP_011650728.1 (recQ-mediated genome instability protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 608 bits (1567), Expect = 8.48e-217
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 66
           RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA
Sbjct: 126 RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 185

Query: 67  DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 126
           DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT
Sbjct: 186 DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 245

Query: 127 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 186
           NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR
Sbjct: 246 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 305

Query: 187 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 246
           IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD
Sbjct: 306 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 365

Query: 247 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 306
           VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS
Sbjct: 366 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 425

Query: 307 NSVPTDEHARIIDVSP 322
           NSVPTDEHARIIDVSP
Sbjct: 426 NSVPTDEHARIIDVSP 441

[Close]

BLAST of Cucsat.G11120 vs. NCBI nr
Match: XP_004138254.1 (recQ-mediated genome instability protein 1 isoform X1 [Cucumis sativus] >KGN63468.1 hypothetical protein Csa_013916 [Cucumis sativus])

HSP 1 Score: 608 bits (1567), Expect = 2.43e-214
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 66
           RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA
Sbjct: 286 RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 345

Query: 67  DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 126
           DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT
Sbjct: 346 DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 405

Query: 127 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 186
           NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR
Sbjct: 406 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 465

Query: 187 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 246
           IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD
Sbjct: 466 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 525

Query: 247 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 306
           VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS
Sbjct: 526 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 585

Query: 307 NSVPTDEHARIIDVSP 322
           NSVPTDEHARIIDVSP
Sbjct: 586 NSVPTDEHARIIDVSP 601

[Close]

BLAST of Cucsat.G11120 vs. NCBI nr
Match: XP_008464407.1 (PREDICTED: recQ-mediated genome instability protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 555 bits (1430), Expect = 6.01e-196
Identity = 290/316 (91.77%), Postives = 304/316 (96.20%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 66
           RTRTGVVPSLASRAT AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVA
Sbjct: 126 RTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVA 185

Query: 67  DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 126
           DAFTTPVSRTNANSELSSNFVSNVEEI SHSIPSGRA  EPTIVPNSVED+SVVNSVD+T
Sbjct: 186 DAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDT 245

Query: 127 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 186
           N  NSV+DSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAK+K P VRGR
Sbjct: 246 NTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGR 305

Query: 187 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 246
           IKCFLTGVKGFQFK+RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSD
Sbjct: 306 IKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSD 365

Query: 247 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 306
           VKVVSAMKETLRQFQIFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACS
Sbjct: 366 VKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACS 425

Query: 307 NSVPTDEHARIIDVSP 322
           N+VPTDEHARIIDVSP
Sbjct: 426 NAVPTDEHARIIDVSP 441

[Close]

BLAST of Cucsat.G11120 vs. NCBI nr
Match: XP_008464406.1 (PREDICTED: recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 555 bits (1430), Expect = 1.54e-193
Identity = 290/316 (91.77%), Postives = 304/316 (96.20%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 66
           RTRTGVVPSLASRAT AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVA
Sbjct: 286 RTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVA 345

Query: 67  DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 126
           DAFTTPVSRTNANSELSSNFVSNVEEI SHSIPSGRA  EPTIVPNSVED+SVVNSVD+T
Sbjct: 346 DAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDT 405

Query: 127 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 186
           N  NSV+DSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAK+K P VRGR
Sbjct: 406 NTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGR 465

Query: 187 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 246
           IKCFLTGVKGFQFK+RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSD
Sbjct: 466 IKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSD 525

Query: 247 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 306
           VKVVSAMKETLRQFQIFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACS
Sbjct: 526 VKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACS 585

Query: 307 NSVPTDEHARIIDVSP 322
           N+VPTDEHARIIDVSP
Sbjct: 586 NAVPTDEHARIIDVSP 601

[Close]

BLAST of Cucsat.G11120 vs. NCBI nr
Match: KAA0057758.1 (recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 548 bits (1413), Expect = 2.52e-190
Identity = 286/312 (91.67%), Postives = 301/312 (96.47%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 66
           RTRTGVVPSLASRAT AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVA
Sbjct: 286 RTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVA 345

Query: 67  DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 126
           DAFTTPVSRTNANSELSSNFVSNVEEI SHSIPSGRA  EPTIVPNSVED+SVVNSVD+T
Sbjct: 346 DAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDT 405

Query: 127 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 186
           NM NSV+DSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAK+KSP VRGR
Sbjct: 406 NMVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKSPSVRGR 465

Query: 187 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 246
           IKCFLTGVKGFQFK+RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSD
Sbjct: 466 IKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSD 525

Query: 247 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 306
           VKVVSAMKETLRQFQIFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACS
Sbjct: 526 VKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACS 585

Query: 307 NSVPTDEHARII 318
           N+VPTDEHAR +
Sbjct: 586 NAVPTDEHARYL 597

[Close]

BLAST of Cucsat.G11120 vs. ExPASy TrEMBL
Match: A0A0A0LNV2 (RecQ-mediated genome instability protein 1 OS=Cucumis sativus OX=3659 GN=Csa_1G001400 PE=3 SV=1)

HSP 1 Score: 608 bits (1567), Expect = 1.18e-214
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 66
           RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA
Sbjct: 286 RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 345

Query: 67  DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 126
           DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT
Sbjct: 346 DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 405

Query: 127 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 186
           NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR
Sbjct: 406 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 465

Query: 187 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 246
           IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD
Sbjct: 466 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 525

Query: 247 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 306
           VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS
Sbjct: 526 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 585

Query: 307 NSVPTDEHARIIDVSP 322
           NSVPTDEHARIIDVSP
Sbjct: 586 NSVPTDEHARIIDVSP 601

[Close]

BLAST of Cucsat.G11120 vs. ExPASy TrEMBL
Match: A0A1S3CLE1 (recQ-mediated genome instability protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502304 PE=4 SV=1)

HSP 1 Score: 555 bits (1430), Expect = 2.91e-196
Identity = 290/316 (91.77%), Postives = 304/316 (96.20%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 66
           RTRTGVVPSLASRAT AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVA
Sbjct: 126 RTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVA 185

Query: 67  DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 126
           DAFTTPVSRTNANSELSSNFVSNVEEI SHSIPSGRA  EPTIVPNSVED+SVVNSVD+T
Sbjct: 186 DAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDT 245

Query: 127 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 186
           N  NSV+DSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAK+K P VRGR
Sbjct: 246 NTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGR 305

Query: 187 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 246
           IKCFLTGVKGFQFK+RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSD
Sbjct: 306 IKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSD 365

Query: 247 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 306
           VKVVSAMKETLRQFQIFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACS
Sbjct: 366 VKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACS 425

Query: 307 NSVPTDEHARIIDVSP 322
           N+VPTDEHARIIDVSP
Sbjct: 426 NAVPTDEHARIIDVSP 441

[Close]

BLAST of Cucsat.G11120 vs. ExPASy TrEMBL
Match: A0A1S3CLI7 (RecQ-mediated genome instability protein 1 OS=Cucumis melo OX=3656 GN=LOC103502304 PE=3 SV=1)

HSP 1 Score: 555 bits (1430), Expect = 7.45e-194
Identity = 290/316 (91.77%), Postives = 304/316 (96.20%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 66
           RTRTGVVPSLASRAT AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVA
Sbjct: 286 RTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVA 345

Query: 67  DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 126
           DAFTTPVSRTNANSELSSNFVSNVEEI SHSIPSGRA  EPTIVPNSVED+SVVNSVD+T
Sbjct: 346 DAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDT 405

Query: 127 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 186
           N  NSV+DSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAK+K P VRGR
Sbjct: 406 NTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGR 465

Query: 187 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 246
           IKCFLTGVKGFQFK+RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSD
Sbjct: 466 IKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSD 525

Query: 247 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 306
           VKVVSAMKETLRQFQIFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACS
Sbjct: 526 VKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACS 585

Query: 307 NSVPTDEHARIIDVSP 322
           N+VPTDEHARIIDVSP
Sbjct: 586 NAVPTDEHARIIDVSP 601

[Close]

BLAST of Cucsat.G11120 vs. ExPASy TrEMBL
Match: A0A5A7URI1 (RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00400 PE=3 SV=1)

HSP 1 Score: 548 bits (1413), Expect = 1.22e-190
Identity = 286/312 (91.67%), Postives = 301/312 (96.47%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 66
           RTRTGVVPSLASRAT AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVA
Sbjct: 286 RTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVA 345

Query: 67  DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 126
           DAFTTPVSRTNANSELSSNFVSNVEEI SHSIPSGRA  EPTIVPNSVED+SVVNSVD+T
Sbjct: 346 DAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDT 405

Query: 127 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 186
           NM NSV+DSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAK+KSP VRGR
Sbjct: 406 NMVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKSPSVRGR 465

Query: 187 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 246
           IKCFLTGVKGFQFK+RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSD
Sbjct: 466 IKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSD 525

Query: 247 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 306
           VKVVSAMKETLRQFQIFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACS
Sbjct: 526 VKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACS 585

Query: 307 NSVPTDEHARII 318
           N+VPTDEHAR +
Sbjct: 586 NAVPTDEHARYL 597

[Close]

BLAST of Cucsat.G11120 vs. ExPASy TrEMBL
Match: A0A5D3BJQ9 (RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00390 PE=3 SV=1)

HSP 1 Score: 544 bits (1402), Expect = 5.67e-189
Identity = 284/312 (91.03%), Postives = 299/312 (95.83%), Query Frame = 0


Query: 7   RTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVA 66
           RTRTGVVPSLASRAT AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVA
Sbjct: 286 RTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVA 345

Query: 67  DAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNT 126
           DAFTTPVSRTNANSELSSNFVSNVEEI SHSIPSGRA  EPTIVPNSVED+SVVNSVD+T
Sbjct: 346 DAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDT 405

Query: 127 NMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGR 186
           N  NSV+DSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAK+K P VRGR
Sbjct: 406 NTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGR 465

Query: 187 IKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSD 246
           IKCFLTGVKGFQFK+RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSD
Sbjct: 466 IKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSD 525

Query: 247 VKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACS 306
           VKVVSAMKETLRQFQIFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACS
Sbjct: 526 VKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACS 585

Query: 307 NSVPTDEHARII 318
           N+VPTDEHAR +
Sbjct: 586 NAVPTDEHARYL 597

The following BLAST results are available for this feature:

BLAST of Cucsat.G11120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XUX6	3.5e-47	41.14	RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RM...	[more]
Q7XRV0	5.9e-31	36.51	RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Cucsat.G11120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650728.1	8.48e-217	100.00	recQ-mediated genome instability protein 1 isoform X2 [Cucumis sativus]	[more]
XP_004138254.1	2.43e-214	100.00	recQ-mediated genome instability protein 1 isoform X1 [Cucumis sativus] >KGN6346...	[more]
XP_008464407.1	6.01e-196	91.77	PREDICTED: recQ-mediated genome instability protein 1 isoform X2 [Cucumis melo]	[more]
XP_008464406.1	1.54e-193	91.77	PREDICTED: recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo]	[more]
KAA0057758.1	2.52e-190	91.67	recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G11120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNV2	1.18e-214	100.00	RecQ-mediated genome instability protein 1 OS=Cucumis sativus OX=3659 GN=Csa_1G0...	[more]
A0A1S3CLE1	2.91e-196	91.77	recQ-mediated genome instability protein 1 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3CLI7	7.45e-194	91.77	RecQ-mediated genome instability protein 1 OS=Cucumis melo OX=3656 GN=LOC1035023...	[more]
A0A5A7URI1	1.22e-190	91.67	RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3BJQ9	5.67e-189	91.03	RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=119469...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013894	RecQ mediated genome instability protein, N-terminal	PFAM	PF08585	RMI1_N	coord: 38..113 e-value: 2.2E-23 score: 83.2
IPR032199	Recq-mediated genome instability protein 1, C-terminal OB-fold domain	PFAM	PF16099	RMI1_C	coord: 281..422 e-value: 2.3E-34 score: 118.3
IPR042470	RecQ mediated genome instability protein, N-terminal, subdomain 2	GENE3D	2.40.50.770		coord: 19..117 e-value: 3.1E-21 score: 77.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..168
None	No IPR available	PANTHER	PTHR14790:SF15	RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1	coord: 194..426
None	No IPR available	PANTHER	PTHR14790:SF15	RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1	coord: 21..250
IPR039215	RecQ-mediated genome instability protein 1	PANTHER	PTHR14790	RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1	coord: 194..426
IPR039215	RecQ-mediated genome instability protein 1	PANTHER	PTHR14790	RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1	coord: 21..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G11120.T1	Cucsat.G11120.T1	mRNA
Cucsat.G11120.T2	Cucsat.G11120.T2	mRNA
Cucsat.G11120.T4	Cucsat.G11120.T4	mRNA
Cucsat.G11120.T3	Cucsat.G11120.T3	mRNA
Cucsat.G11120.T8	Cucsat.G11120.T8	mRNA
Cucsat.G11120.T5	Cucsat.G11120.T5	mRNA
Cucsat.G11120.T11	Cucsat.G11120.T11	mRNA
Cucsat.G11120.T6	Cucsat.G11120.T6	mRNA
Cucsat.G11120.T9	Cucsat.G11120.T9	mRNA
Cucsat.G11120.T12	Cucsat.G11120.T12	mRNA
Cucsat.G11120.T10	Cucsat.G11120.T10	mRNA
Cucsat.G11120.T7	Cucsat.G11120.T7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0000712	resolution of meiotic recombination intermediates
cellular_component	GO:0016604	nuclear body
cellular_component	GO:0031422	RecQ family helicase-topoisomerase III complex
molecular_function	GO:0000166	nucleotide binding