Cucsat.G10929 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G10929
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Signal sequence receptor subunit alpha
Location	ctg1681: 2202874 .. 2207490 (-)
RNA-Seq Expression	Cucsat.G10929
Synteny	Cucsat.G10929

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTGAGAATCTTAAATGGGTTTTAAGTTAACCTAATAAGAAACGAAATAGAATGAAAAGGAAAATGGAAAAAAGTTGTAGCAATTGGGGAAACCAACCGGGTTTTCTTCTCGATATCCCAACCAAATAAAGTTTGCCTTCCTCTTGGATCCCCAAACTTTGACCCTCCAAAATCGAAGCTTGGTCGTCTTCCTCTCTCTTTAATCCACACTTTCAACTCCCAATCTTCCCTTTCCCTTTGATTCCCCATTGTCGCCATGAACTCCTTCAGACTTTTCTTCCTTGCCCTTCTTCTTCTTGCCTCTCCATTCCTCAAAGGTTTGCTCTTTTTTCTCAATCATAGATCTACATCCTCTTTCCATCATTTCGCTCTTCCCGATTCTTCTTTTGTAATTACCCTGTTTCATTAGATTTTCCATCTTTCTTCTGCATGCATGGTTTTCGCTCCTAGTTTTCTGTTCTAATGCGTTCTGGGTTTTCACTCTTTTGGGGTTTCGTTAATTGTTTCTCTGATGGGTATTCATTTTATATCGGATCCTCTCTTTTCTAGTCTTATTTTGTTATTCTCTGACTGGTCTTTGATGGTGAAAGGAGCTTATTTGATTGATTCATTTGTTTATTGAAGGGTTGGTGCTTACAATGCATAGATATTGTTGTCAAGTTCTTCTGAAGGGGGGTCTATGATCCTATCGCCATTTTTCAATGTCACATGCCCCCCTTCCCATCTCTTATGTGAATGATTTGATTTCAATGAATTTATGAATAAGATCTCGGGTGTGCTGCCTGGTCACTAGGAATCTATATTAGGATTTGGACATTTATTCATTTATTTCGGTGAGTGCATTGAATTTCAATGTTCTAGCGGGTTATTTTACATTTGCATTGTTTTTTACTTGCTCAACAGCTGCCACATGTCAATCGGATTCGGATGTCGAATCATCTGAGGCCGTTGAAGATGTTAGCGATCTTGGAATTGTAGGTGATGAAGATTCTCAGGATTTTGGAGAAGTGAACTTTGGCCCTGCTCCAGGAGTTGATACTGTCTGTGTTTTTCCAAAAAATAGTGCACGCAGTAAGTGTTCAAATTAGATTCAGGATTTGGTAACCGTAACCCTTTTTTTGATATAGGCGTGACATACTTTTATGAATTATGATATCAATTATCTGTAATCTATAATCTATAGTTGACATTGAAGTTTATGCCTTCCGTTGCAGTAGTGCCAGCTGGTGAAGAGACTCAACTACTTGCTGGAGTGAAAAATAATGGTAACTAACTTTCATTCTGCCATACTCCTTTTTTAATATCTATTATCTACTGGGTAAGTGGGTTTTTATCCGAGATTATGTCACTGACTGTAGTACGTTGTCTTTTTTAATTGAAGTTTGTTAAATGTGGGAGTCATGCATGAATGTAACAACAAAGCCATTGCGGCCAGTATTCATTAAACGTTTATTGCTTACCATTGATCCAAAATCTTATCAGTCAATAATTTCCTTGAACTGTTATTTTTTAATCCAGGGGAATCAAGCTTGAATATTATAGCTATCAAGGCCAGCATTCACTACACTTTTGATCATCGTATGTTGATTCAAAATCTTACTGGACAGGTAATCTCGCCTGACTACTGTCATTTTCATTAGAAAGAGTTTTTGTATGATCTTAACTTGTTTTCTTTTTCATTCATCTCTAATATATTTAATGACTACTAGCAGAGGACAATAATTTGATTTGCCTGCGTGTTGATCTCAATCAGTTGAATGCCAAATCTTATGAAGGATATTTGTTGTGTTTGTTTATGAAATATGTGTTTTATGTATTTTGATTTTAAAATTGTAAGTTCGATTAAATACTTGTGTAGATTGGAGATCCTAGTATTGAAAAAGTCATCTGGACCACTGAGAATTCCTTTTGTTTGTACATCATTAATTTAGTTGTACAGGATGCGTATTGTTTTTTTTTTTTTTTGTAATATATGTTTATACATTTGTCTTCTTCCTTTTCCTAGTAAGTCCTGTTTTTTCCTGTTTCTTTTTCTTCTTTTTGAAACTTTGGCCCATGTTTTTCACTTTTAGACTGTTATTGGCCAGTGCAAACTTTCTAGAGAAAGATGATCCTGTTACTCTTTCTGTGATTATGTTTTGAATGTCGATGTCAACTCTTAAACTTTTTGATAGAAATTGCCAACGTTAACACTCTTTATGCAATTTATTGCTGGATATCATACTGCTATGTGCTATTGGTTTGATTTATATCTGTTGATTGACTGTTCCCTTTCAACGGAAGTTCAACCTAGCTTATTGTCATACTATGAGTTGTATACTCTTTTTGTGAATTTCATAGATCAATGAAATTGTTCCGTATAAATAACAACTGAAGTTCAGCATCCTCTATATATCTTTTAATTTGGCTTTTGAGTACAGGCTTCTTTCTCTTTGGTTATAAAGATCAGCTATGAACTTCCAGTTCCAGTTATATTTGAAGCTATTAGTGTGGAAGTCTACTGCTGAATTTGGGTTTCTTATTGAAAAACCACTATTTTTGCTTTGTAGTCTTTTTCTCCTTTTTGGCTTGAGATCTAGAGGAGTTTGGCTTGTTTGTATTGTTTTTTTATTGATCTTTTAGTCATTTTACTCCTTTTTTTTCCTAGTCTAATTCTCTCATACTTTACGCTCTAGTCTCATTTATTATCATTAACAAAGAGGCCCGTTTCCGTTTTAAAAAAAATTATATTTGTGGATTTCTTTAAAAAAAAATTATTTGCAGTAACAGGCTCGTTATTTTTAACTTATACATCTTTCTTATGGAACTTGTAGGTGTTCCACAATGCAACAGTGACCCCATCAACACAAGCTTCTTACCCGTACATATTTGCTGTCAGCAAGTATTTGCAGGTACATTCATCATCGTTATTATAATGGTTCCATGCCTCTATGAATTTTTAGTTCATAGAATTACTAACCTGCTCATCTTTATTAACTTTGAAGATCTAATTGGTGAAACTTAATATATTCCTGACGTGCAGCCCGGAAATTTTGATCTGGTGGGTACCATCTTTTATGAAATTGACCAGAATGCATACCAAAGCATCTTCTATAATGGTACTATTGAAGTTGTTGAAGCTAGTGGTATCATCAGCATGGAATCTGTGTTTTTAGTTAGTCTTGGAATTGCCCTTCTTGTTCTGCTCGTCTTGTGGATTCATGGTCAAATACAGCAAAAACTCTCCAAGGTATATATCTTTCTGGTCTTTATTTGATAAAGACCTTGTATTCTAACAGTGGATCCTGCCCATCTATCGTTTATTTATTATGATGGCATCAACGATGCTGTCCCAGAAATAGGGGCATGCAATTGTTTTCATCAAACATGCTACCACTTTTGTTTGTGGCCTTAGTTTTGGCATTTGTCCATAGCTTAGAATCTAACTGAACTGGTTTATAAGTATTTTCGAGCTACCATGGTCCTCACCTTTATACCTCCTTGGATTCTGACCAAATCTTCTGATTTTAATATGAGTAATAGAAAGGTGGAGAGGCAAGAAGTGCATCTTACCCAAATTTTAAATTTCTCTAGAGATATGGGTACTTTTGACATAAAATTCTATGCCATTCCTTTTATGCATCAGAAACCCAAGAGGGCTGCTTCCAAGGTTGAAGTTGGAACGAAGACTGTTGATACCTCAATGGATGAATGGCTTCAGGTTTGTTTTTGTTACGGAAATTCATACATGCCTGGAGAAAATCTCAAAACTACTTCTGATATATTTTATAATCTTATCTCCTCCTATCCTTAGGGAACTGCATACACTAAGTCTGGATCTAACAAGTTGAAGAAAAAGAACTAATGAAGACTCATCTCCATCCCAGTTGCACAGCATACTGACAATGTGCAGATTCCTAAAACCCACATTTGGCAGTTGAAGATTTGAGGAGAAAGTCCAAAGTTGACTAGTTTTGTAAGTTAGGTGCGTTAAACCCTTCCTTGCCACTGTAGCATGTCGAGGAATTTTTATCATTCTCCGTCTCTTAATCCCAATCTAAATTAAGTTTGCAACAATACAGTTGTTCTGAATCTGGAGAGTTTTCAGTGGAGTATATGATTATCATAGTTTAAACTTTTTTATACTTTCCTTGGAACCCCTTATTCTGTATTTATCACAACCCCAGCTTTGTTAAAATCATCAATGTTGTGGGGCATGCAGGTTACCACTTTTCCCTTTGACATCTTTTACCTCTGATTCATGCGAAAGTTCTACTCATTCATTTGACATCCAAATGGTCTCTCTAGAGAATAAAACTGTTAATTTGCTAGATATTGATTGTTTCGCTCATTAAATCACCCCATGTGAGGTCCTGGCTGGTAGCTTTCATGCTTTGCATGTAATTTGAAATAATGTATATATGATTTTATGAGGAGACAAATGGAGAATTGATTGAATTGCTTAAGAGTTGGGTAAAGATTCTTAAATTGGATGTGTGCTGTGCTTGGGACGCCATATTGCCAGCGAGGAAGGAAATCAATGAGATTAGGTTTCTAGTCTCCTCTTTGTAATATCTGGATTTTCCTGTTTTTCAACTTTTAGAAGACTAAAAAATAATATCTGGCCTATTTATAT

Coding sequence (CDS)

ATGAACTCCTTCAGACTTTTCTTCCTTGCCCTTCTTCTTCTTGCCTCTCCATTCCTCAAAGCTGCCACATGTCAATCGGATTCGGATGTCGAATCATCTGAGGCCGTTGAAGATGTTAGCGATCTTGGAATTGTAGGTGATGAAGATTCTCAGGATTTTGGAGAAGTGAACTTTGGCCCTGCTCCAGGAGTTGATACTGTCTGTGTTTTTCCAAAAAATAGTGCACGCATAGTGCCAGCTGGTGAAGAGACTCAACTACTTGCTGGAGTGAAAAATAATGGGGAATCAAGCTTGAATATTATAGCTATCAAGGCCAGCATTCACTACACTTTTGATCATCGTATGTTGATTCAAAATCTTACTGGACAGGTGTTCCACAATGCAACAGTGACCCCATCAACACAAGCTTCTTACCCGTACATATTTGCTGTCAGCAAGTATTTGCAGCCCGGAAATTTTGATCTGGTGGGTACCATCTTTTATGAAATTGACCAGAATGCATACCAAAGCATCTTCTATAATGGTACTATTGAAGTTGTTGAAGCTAGTGGTATCATCAGCATGGAATCTGTGTTTTTAGTTAGTCTTGGAATTGCCCTTCTTGTTCTGCTCGTCTTGTGGATTCATGGTCAAATACAGCAAAAACTCTCCAAGAAACCCAAGAGGGCTGCTTCCAAGGTTGAAGTTGGAACGAAGACTGTTGATACCTCAATGGATGAATGGCTTCAGGGAACTGCATACACTAAGTCTGGATCTAACAAGTTGAAGAAAAAGAACTAA

Protein sequence

MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGPAPGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNLTGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVVEASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDEWLQGTAYTKSGSNKLKKKN

Homology

[Close]

BLAST of Cucsat.G10929 vs. ExPASy Swiss-Prot
Match: P45434 (Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=At2g21160 PE=2 SV=3)

HSP 1 Score: 265.0 bits (676), Expect = 8.9e-70
Identity = 141/260 (54.23%), Postives = 195/260 (75.00%), Query Frame = 0


Query: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDV--SDLGIVGDEDSQDFGEVNF 60
           M + R+ FLALLLLASP L+ A CQSD++ + S  V+DV   +     +ED  D  ++N 
Sbjct: 1   MMNLRVLFLALLLLASPLLQVARCQSDAE-DHSSLVDDVVGENTDDAVEEDDHDL-DMNL 60

Query: 61  GPAPGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQ 120
              PGV+TVCVFPKNSA++VPAGEET+LL G+KN G++ + ++ I+AS+H  +DH++L+Q
Sbjct: 61  SSFPGVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQ 120

Query: 121 NLTGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIE 180
           NLT    +NA++  S QA++PYIFAVS+YLQPG FDLVG I Y+++   YQS+FYNGTIE
Sbjct: 121 NLTMLRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIE 180

Query: 181 VVEASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSM 240
           VVE+ G++S ESVFL++LGI LL+LL LW + Q+ Q+L+KK K+  SKVEVGT++ + S+
Sbjct: 181 VVESGGLLSGESVFLLTLGIGLLLLLGLWAYSQV-QRLTKKTKK-VSKVEVGTRSTEASL 240

Query: 241 DEWLQGTAYTKSGSNKLKKK 259
           DEWL+GT   K+ S K K K
Sbjct: 241 DEWLEGTTLAKTSSGKTKNK 256

[Close]

BLAST of Cucsat.G10929 vs. ExPASy Swiss-Prot
Match: Q54R45 (Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689 GN=ssr1 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.8e-15
Identity = 66/218 (30.28%), Postives = 102/218 (46.79%), Query Frame = 0


Query: 47  DEDSQDFGEVNFGPAPGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKAS 106
           D +  D   V   P   V    +FP N  +   AG   ++L G  NN + +LNI  I AS
Sbjct: 22  DVEITDDEVVQATPTSDVSFSYIFPDNQDKNFAAGSVVEVLVGFTNNADKALNITHIFAS 81

Query: 107 IHYTFDHRMLIQNLTGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQN 166
           +++  D  + IQN T   F    V     A+  Y F  S+YL+P  F L+ ++ Y+    
Sbjct: 82  LNHPQDFSVFIQNYTRGDF-GIAVEKGHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQ 141

Query: 167 AYQSIFYNGTIEVVEASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASK 226
            +   F+N TI + E      M+S FL+ LG+  +  +   ++G++ +   +K  R  SK
Sbjct: 142 NFTQTFFNSTINITEKETSFDMDSFFLILLGLGFVGGIGYIVYGKMPK---QKKVRTVSK 201

Query: 227 VEVGTKTVDTSMD--EWLQGTAYTKS---GSNKLKKKN 260
           V      V+T  +  EWL GT+   S      K+ KKN
Sbjct: 202 VNKNAVRVETEDETAEWLSGTSAASSKVKSVQKVVKKN 235

[Close]

BLAST of Cucsat.G10929 vs. NCBI nr
Match: XP_004144834.1 (translocon-associated protein subunit alpha [Cucumis sativus] >KGN43228.1 hypothetical protein Csa_020503 [Cucumis sativus])

HSP 1 Score: 492 bits (1267), Expect = 4.39e-175
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60
           MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP
Sbjct: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180
           TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV
Sbjct: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240
           EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE
Sbjct: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240

Query: 241 WLQGTAYTKSGSNKLKKKN 259
           WLQGTAYTKSGSNKLKKKN
Sbjct: 241 WLQGTAYTKSGSNKLKKKN 259

[Close]

BLAST of Cucsat.G10929 vs. NCBI nr
Match: TYK12148.1 (translocon-associated protein subunit alpha-like [Cucumis melo var. makuwa])

HSP 1 Score: 479 bits (1234), Expect = 4.70e-170
Identity = 250/259 (96.53%), Postives = 257/259 (99.23%), Query Frame = 0


Query: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60
           MN+FR+FFLALLLLASPFLKAATCQ+DSDVE+SEAVE+VSDLGIVGDEDSQDFGEVNFGP
Sbjct: 1   MNTFRVFFLALLLLASPFLKAATCQADSDVEASEAVEEVSDLGIVGDEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEETQLLAGVKN+GESSLNIIAIKASIHYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNDGESSLNIIAIKASIHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180
           TGQVFHNATV PS QASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV
Sbjct: 121 TGQVFHNATVPPSAQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240
           EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKT+DTSMDE
Sbjct: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAYTKSGSNKLKKKN 259
           WLQGTAYTKSGSNKLKKKN
Sbjct: 241 WLQGTAYTKSGSNKLKKKN 259

[Close]

BLAST of Cucsat.G10929 vs. NCBI nr
Match: XP_008447984.1 (PREDICTED: translocon-associated protein subunit alpha-like [Cucumis melo])

HSP 1 Score: 478 bits (1231), Expect = 1.35e-169
Identity = 249/259 (96.14%), Postives = 257/259 (99.23%), Query Frame = 0


Query: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60
           MN+FR+FFLALLLLASPFLKAATCQ+DSDVE+SEAVE+VSDLGIVGDEDSQDFGEVNFGP
Sbjct: 1   MNTFRVFFLALLLLASPFLKAATCQADSDVEASEAVEEVSDLGIVGDEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEETQLLAGVKN+GESSLNIIAIKASIHYTFDHR+LIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNDGESSLNIIAIKASIHYTFDHRLLIQNL 120

Query: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180
           TGQVFHNATV PS QASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV
Sbjct: 121 TGQVFHNATVPPSAQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240
           EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKT+DTSMDE
Sbjct: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAYTKSGSNKLKKKN 259
           WLQGTAYTKSGSNKLKKKN
Sbjct: 241 WLQGTAYTKSGSNKLKKKN 259

[Close]

BLAST of Cucsat.G10929 vs. NCBI nr
Match: XP_038886848.1 (translocon-associated protein subunit alpha-like [Benincasa hispida])

HSP 1 Score: 465 bits (1196), Expect = 2.91e-164
Identity = 241/259 (93.05%), Postives = 255/259 (98.46%), Query Frame = 0


Query: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60
           MN+FR+FFLA LLLASPFL+AATCQSDSDVESSEAVE+VSDLGIVG+EDSQDFGEVNFGP
Sbjct: 1   MNAFRVFFLAFLLLASPFLQAATCQSDSDVESSEAVEEVSDLGIVGEEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEET+LLAGVKN+GESSLNIIAIKASIHYTFDHR+LIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASIHYTFDHRLLIQNL 120

Query: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180
           TGQVFHNATV PSTQA+YPY+FAVSK+LQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV
Sbjct: 121 TGQVFHNATVPPSTQATYPYMFAVSKFLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240
           EASGIIS+ESVFLV+LGIALLVLLVLWIHGQIQQKLSKKPKR ASKVEVGTKTVDTSMDE
Sbjct: 181 EASGIISIESVFLVTLGIALLVLLVLWIHGQIQQKLSKKPKRTASKVEVGTKTVDTSMDE 240

Query: 241 WLQGTAYTKSGSNKLKKKN 259
           WLQGTAYTKSGS+K KKKN
Sbjct: 241 WLQGTAYTKSGSSKSKKKN 259

[Close]

BLAST of Cucsat.G10929 vs. NCBI nr
Match: XP_022952473.1 (translocon-associated protein subunit alpha-like [Cucurbita moschata])

HSP 1 Score: 446 bits (1147), Expect = 8.22e-157
Identity = 230/259 (88.80%), Postives = 249/259 (96.14%), Query Frame = 0


Query: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60
           M +FR+FFLALLLLASPFL+AATCQSDSDVESSE VE+ SDLG+VG+EDSQDFGEVNFGP
Sbjct: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDVESSEVVEEASDLGVVGEEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEET+LLAGVKN+GESSLN+IAIKAS+HYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180
           TGQVFHNATV PSTQASYPYIFAVSK+LQPGNFDLVGTIFYEIDQ AYQS+F+NGTIEVV
Sbjct: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180

Query: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240
           EASG+ISME+VFLV+LGIALLVLL LWIHGQIQQKLSKKPKR ASKVEVGTKT+DTSMDE
Sbjct: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAYTKSGSNKLKKKN 259
           WLQGTA+T+S S K KKKN
Sbjct: 241 WLQGTAFTRSSS-KSKKKN 258

[Close]

BLAST of Cucsat.G10929 vs. ExPASy TrEMBL
Match: A0A0A0K182 (Signal sequence receptor subunit alpha OS=Cucumis sativus OX=3659 GN=Csa_7G009720 PE=3 SV=1)

HSP 1 Score: 492 bits (1267), Expect = 2.12e-175
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60
           MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP
Sbjct: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180
           TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV
Sbjct: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240
           EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE
Sbjct: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240

Query: 241 WLQGTAYTKSGSNKLKKKN 259
           WLQGTAYTKSGSNKLKKKN
Sbjct: 241 WLQGTAYTKSGSNKLKKKN 259

[Close]

BLAST of Cucsat.G10929 vs. ExPASy TrEMBL
Match: A0A5D3CLZ0 (Signal sequence receptor subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00850 PE=3 SV=1)

HSP 1 Score: 479 bits (1234), Expect = 2.28e-170
Identity = 250/259 (96.53%), Postives = 257/259 (99.23%), Query Frame = 0


Query: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60
           MN+FR+FFLALLLLASPFLKAATCQ+DSDVE+SEAVE+VSDLGIVGDEDSQDFGEVNFGP
Sbjct: 1   MNTFRVFFLALLLLASPFLKAATCQADSDVEASEAVEEVSDLGIVGDEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEETQLLAGVKN+GESSLNIIAIKASIHYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNDGESSLNIIAIKASIHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180
           TGQVFHNATV PS QASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV
Sbjct: 121 TGQVFHNATVPPSAQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240
           EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKT+DTSMDE
Sbjct: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAYTKSGSNKLKKKN 259
           WLQGTAYTKSGSNKLKKKN
Sbjct: 241 WLQGTAYTKSGSNKLKKKN 259

[Close]

BLAST of Cucsat.G10929 vs. ExPASy TrEMBL
Match: A0A1S3BIP9 (Signal sequence receptor subunit alpha OS=Cucumis melo OX=3656 GN=LOC103490305 PE=3 SV=1)

HSP 1 Score: 478 bits (1231), Expect = 6.52e-170
Identity = 249/259 (96.14%), Postives = 257/259 (99.23%), Query Frame = 0


Query: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60
           MN+FR+FFLALLLLASPFLKAATCQ+DSDVE+SEAVE+VSDLGIVGDEDSQDFGEVNFGP
Sbjct: 1   MNTFRVFFLALLLLASPFLKAATCQADSDVEASEAVEEVSDLGIVGDEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEETQLLAGVKN+GESSLNIIAIKASIHYTFDHR+LIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNDGESSLNIIAIKASIHYTFDHRLLIQNL 120

Query: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180
           TGQVFHNATV PS QASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV
Sbjct: 121 TGQVFHNATVPPSAQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240
           EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKT+DTSMDE
Sbjct: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAYTKSGSNKLKKKN 259
           WLQGTAYTKSGSNKLKKKN
Sbjct: 241 WLQGTAYTKSGSNKLKKKN 259

[Close]

BLAST of Cucsat.G10929 vs. ExPASy TrEMBL
Match: A0A6J1GKP1 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111455149 PE=3 SV=1)

HSP 1 Score: 446 bits (1147), Expect = 3.98e-157
Identity = 230/259 (88.80%), Postives = 249/259 (96.14%), Query Frame = 0


Query: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60
           M +FR+FFLALLLLASPFL+AATCQSDSDVESSE VE+ SDLG+VG+EDSQDFGEVNFGP
Sbjct: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDVESSEVVEEASDLGVVGEEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEET+LLAGVKN+GESSLN+IAIKAS+HYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180
           TGQVFHNATV PSTQASYPYIFAVSK+LQPGNFDLVGTIFYEIDQ AYQS+F+NGTIEVV
Sbjct: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180

Query: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240
           EASG+ISME+VFLV+LGIALLVLL LWIHGQIQQKLSKKPKR ASKVEVGTKT+DTSMDE
Sbjct: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAYTKSGSNKLKKKN 259
           WLQGTA+T+S S K KKKN
Sbjct: 241 WLQGTAFTRSSS-KSKKKN 258

[Close]

BLAST of Cucsat.G10929 vs. ExPASy TrEMBL
Match: A0A5A7U5T4 (Signal sequence receptor subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00760 PE=3 SV=1)

HSP 1 Score: 446 bits (1147), Expect = 5.92e-157
Identity = 231/238 (97.06%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 22  ATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGPAPGVDTVCVFPKNSARIVPAG 81
           ATCQ+DSDVE+SEAVE+VSDLGIVGDEDSQDFGEVNFGPAPGVDTVCVFPKNSARIVPAG
Sbjct: 32  ATCQADSDVEASEAVEEVSDLGIVGDEDSQDFGEVNFGPAPGVDTVCVFPKNSARIVPAG 91

Query: 82  EETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNLTGQVFHNATVTPSTQASYPYI 141
           EETQLLAGVKN+GESSLNIIAIKASIHYTFDHRMLIQNLTGQVFHNATV PS QASYPYI
Sbjct: 92  EETQLLAGVKNDGESSLNIIAIKASIHYTFDHRMLIQNLTGQVFHNATVPPSAQASYPYI 151

Query: 142 FAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVVEASGIISMESVFLVSLGIALL 201
           FAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVVEASGIISMESVFLVSLGIALL
Sbjct: 152 FAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVVEASGIISMESVFLVSLGIALL 211

Query: 202 VLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDEWLQGTAYTKSGSNKLKKKN 259
           VLLVLWIHGQIQQKLSKKPKRAASKVEVGTKT+DTSMDEWLQGTAYTKSGSNKLKKKN
Sbjct: 212 VLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTIDTSMDEWLQGTAYTKSGSNKLKKKN 269

The following BLAST results are available for this feature:

BLAST of Cucsat.G10929 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45434	8.9e-70	54.23	Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q54R45	2.8e-15	30.28	Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689...	[more]

BLAST of Cucsat.G10929 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144834.1	4.39e-175	100.00	translocon-associated protein subunit alpha [Cucumis sativus] >KGN43228.1 hypoth...	[more]
TYK12148.1	4.70e-170	96.53	translocon-associated protein subunit alpha-like [Cucumis melo var. makuwa]	[more]
XP_008447984.1	1.35e-169	96.14	PREDICTED: translocon-associated protein subunit alpha-like [Cucumis melo]	[more]
XP_038886848.1	2.91e-164	93.05	translocon-associated protein subunit alpha-like [Benincasa hispida]	[more]
XP_022952473.1	8.22e-157	88.80	translocon-associated protein subunit alpha-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G10929 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K182	2.12e-175	100.00	Signal sequence receptor subunit alpha OS=Cucumis sativus OX=3659 GN=Csa_7G00972...	[more]
A0A5D3CLZ0	2.28e-170	96.53	Signal sequence receptor subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BIP9	6.52e-170	96.14	Signal sequence receptor subunit alpha OS=Cucumis melo OX=3656 GN=LOC103490305 P...	[more]
A0A6J1GKP1	3.98e-157	88.80	Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A5A7U5T4	5.92e-157	97.06	Signal sequence receptor subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005595	Translocon-associated protein (TRAP), alpha subunit	PFAM	PF03896	TRAP_alpha	coord: 27..210 e-value: 2.3E-24 score: 86.1
None	No IPR available	PANTHER	PTHR12924:SF5	SUBFAMILY NOT NAMED	coord: 1..218
None	No IPR available	PANTHER	PTHR12924	TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT	coord: 1..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G10929.T3	Cucsat.G10929.T3	mRNA
Cucsat.G10929.T1	Cucsat.G10929.T1	mRNA
Cucsat.G10929.T2	Cucsat.G10929.T2	mRNA
Cucsat.G10929.T5	Cucsat.G10929.T5	mRNA
Cucsat.G10929.T4	Cucsat.G10929.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane