Cucsat.G10702 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G10702
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	RRP15-like protein
Location	ctg1681: 1108389 .. 1112297 (+)
RNA-Seq Expression	Cucsat.G10702
Synteny	Cucsat.G10702

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCATCCTTATTTTTTCCTTTTACTAAACCCTATTTCTCGCTCAGTCATTCTCTCCGTCTATTACTGAACCCTCCCCCGCCTGCCGCACTCCCTCCGCTCTTCCTCCTACCGGACGGCGCACTAACAGCTGCCGCAGCCTCAGCCTCAGCCTTCCGGCGAATTCGCTGTTGCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCTGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGGTTCAGCCCCTTGTCATCGCCGCCGTTGCTCATTTTTCAGGTCTCCAAGGTTTTTTTTTTTCGCTTTATTTTGTTTTGTTGGGCTATGTTGGTTTATTCTCTTCACCGACGGAGAAGAAAAATCGATAGTGTTTTTTTTGGGGTTGTTGATTGCTTCTTCAACCAATGTTCAAGTAGTCTGAATGAAATTATAAAGTTAAGAATTTTTATTAGAGGGAAAAAAAGATTGAATCAAGAGGAATAAGGGAAAAAACTTATCATTCCTATCGGTGTTAGTAAATGAAATGATAAAATGTTTAAGAAGATGAACAAAGAAAAAGAGAAAATTCACTTAGTTTGTTTGGCTATAAAAAGACTTGTTGGAATAGAAAGCCTGTGTTTAAATATATTAAAGTTATTGTTATCAATTAAAAACAAAATCAACATTGGACAAATAAACTAGAAAGATAACATTGAGTTTGAGTCTGATCGAACGACATCGAATCTTCTTGAATATTGAAGAAACTATGAATGCCTACGAACTGGCATATGGTGGTTTTTGTTAGACAGGCGTAAATTAAATTTATACATATATAAGAAATCTTATGAGGTGTTCATATATATTATGGGGTAGAATTGTAAACAGGTGTGTGTATATTAGTTTCAACTGATGTCATTTTTCAAACAATTGGTTTCATTTTTTTGGGACATCCGAAAACACTGATTTGTAATCCTTCCAAATTCAGGGGTTTCAAACAGGGGTTAAGATCTTTTGGAATATTTGTTTCGGATAAGCTTTGCATTAGAATCAGGTACTATGACTGACGTCGGGAATGCGGTAGAATTGGTTAGAGGTGCAAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTCTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACGATGATGATGGTGAGAAGGCTCCAAGAGTTAAAAAGGAGAGCAAAATTTTGGTGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTGAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCTGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAACATATCTGATGAAACTCTGGTAGTTTATCTTAAATATGTCCAAATTGTTTTTAACAGTTGAAGTAATGAAGACATGATTGTGCCATATTTGTGATACAGGGTCCGATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTATTTCCTTTTAAATCAAATATCTTGTTTGTTCTATGATTGAGCTTTTTCTTGAAATTGGTCGAATGTAAATGTTCAAATATTGCAGGTAGGAGAAAAAGGTCATGTGAAACCGGCTACATACCTGGATTCTCACGAAAAATTTCTTATTGGTGTTGCTACAAAAGGAGGTAGCATAGTTCTATTTTACTTTGAGATGGGCGTGGTTATCTTTTTTATTTTGACTTTGTTTATTATGTCTCTCATCATTCTAACACATTTATCTCCATGTGTATTGTTGCTTGCTGAATGTTAGTCGTCAAGTTGTTTAATGCTGTAAGTAGCCAAGTTTTGATTTCAGACAACTTTTTTGCTGCATCCTCCTTAACTATGTTGTGTTCATCGCTGAATTCCATTATTTTCAATATGACAGGTGAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCGAGAACTAAAGATGCTAAAGGTATTATGATCTCAGAAGTTTACAAAATCTCAGATTGTGTATGAGTATGAGTAATATAATCTTCAGTTTCTTTTCTCTTGCCGCATGAATATGTTGTCCCTAAATTTTCATTCAGTTGATGTCTTTGTCGTTGCATGCTGCATCATATTAAATCTTGTAGTTTAATTTTTCTAGTCATATGATGTATGTCTTTTATTTCTTTTCGTGGTTTCTGCTTTGTACTTGTTGAAAATTATGTTCGTATAGTCTGACCACGTATTGAACTTCTAATAAATGAGTCATGGTCAACTTGACTAATATATTGCCTTTGATAGGAAATATGTCTGTGATTGGAGTAATCAGTGATTTGAAGTTAGCCCCTCAAATTGATCGACATATTAGTTTCTCATTCTTACTCCCAGTCAATTAATGCCTTACCCTGTTTGCTTATATAGTAATAGTATTATGTAATGTTCAGCGTAACCTTGTTAGACCCATTTTGTTTGTGTATCAAGATACTTATCCTTTATTTCCTGAATTGTGAATCTGAGTTGCCATTCAAGATTGAGGGTGAAACCATGTCTTGAGTGGTTTTTCATTCTATCATGTCTCATTCTGAGCAAATTATTTGGTTTATATTGCCAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGGTCAGTTATTTTTCTACTTTTTAGTTCTCAACTAACTGCTGGTAAATTCTATTTTTAATCTCTTACAAGCGATTTTAGTTTTTACAAACACCTAAGCTCGGTGCCCAGAGGCAAAGCTTATGCATGTCCATCATCCTTATTGTATGTGGGTAGCGGAATTGGAAGGGTAGGGATGCCCATGGTTGGGGCAAGAACAGGGATAACTTTCATGTCTCCACAAAATTTCTGTTAAATTTATGCAGATCGGGATAGGGATAGGGATCTCCTACGAGGCATTCTAATTTAATAATACATAATTAAAAAAGGTAAATGGGATGGGGAGCGGGGACCAAGCCCTATGGGGAAAATTGACATAGAAAGGGGTGTTGATTAAGGGAGTGAAACTCAGGTCACCATCATACACTATCTGAGTATCTGTTCTTTCATGTCCATAATGCAACAAACTCAAATAGCCATCTCTGTGTTGAACAGTTAAACACATCAGGTGGTGCAGCGGACACTGAAGGCCCTGCCTGGGCTCCGTTACGCGACAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGTAAGATACGATATATTTTCAAAGCCTACTGTAGGTTGGATCTCTGTTTTTATCAGTTACGATATTCATATCATTTGGATTGATTATACGTGCAGGATAATATGATGACAGCGGCAGAGGACAATGGGAGGGTGTTGGAAGACAGTAGTTCAGATGAAGATGATTGACTAGTCTAACACTACAAGTGAATTGCCTAGTTTGTAGTAGCTTTCAAGTTGCCTATAGTATACTTAAAAAGCTAAGCTCGATTTTGGCTTGTTAGCAAATTCAGCACATGTATGTCTCAGCTATATGTTATCCAGCAAAAAGAAAGAATTTCCCCCCTATTTTATTATCCAATTTTTTAGTCTGTGCCATCTGGTGAGATTAAATTGTATAAATGCCGCCCATTTTGTAGGATTTTTGAGCAAATTGGTTTAAAGATACAAAATTTGGTCTACATTTGTATGGATTGCACAAATAGTTTGAAAGAAATGTGTATTTAACGTACCTATCCAATGCTTAGTTACTTTGAGTACGAGAGAGATTGTTGGTGTTAC

Coding sequence (CDS)

ATGACTGACGTCGGGAATGCGGTAGAATTGGTTAGAGGTGCAAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTCTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACGATGATGATGGTGAGAAGGCTCCAAGAGTTAAAAAGGAGAGCAAAATTTTGGTGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTGAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCTGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAACATATCTGATGAAACTCTGGGTCCGATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTAGGAGAAAAAGGTCATGTGAAACCGGCTACATACCTGGATTCTCACGAAAAATTTCTTATTGGTGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTGAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCGAGAACTAAAGATGCTAAAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGTTAAACACATCAGGTGGTGCAGCGGACACTGAAGGCCCTGCCTGGGCTCCGTTACGCGACAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGATAATATGATGACAGCGGCAGAGGACAATGGGAGGGTGTTGGAAGACAGTAGTTCAGATGAAGATGATTGA

Protein sequence

MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAEDNGRVLEDSSSDEDD

Homology

[Close]

BLAST of Cucsat.G10702 vs. NCBI nr
Match: XP_004144556.1 (RRP15-like protein [Cucumis sativus] >XP_011658649.1 RRP15-like protein [Cucumis sativus] >KGN43394.1 hypothetical protein Csa_020346 [Cucumis sativus])

HSP 1 Score: 271 bits (694), Expect = 1.04e-88
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
           DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETL 146
           KFTEGCRAFRAAFMSILKKNISDETL
Sbjct: 121 KFTEGCRAFRAAFMSILKKNISDETL 146

[Close]

BLAST of Cucsat.G10702 vs. NCBI nr
Match: XP_008462030.1 (PREDICTED: RRP15-like protein [Cucumis melo])

HSP 1 Score: 255 bits (651), Expect = 3.45e-82
Identity = 136/146 (93.15%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPRMMGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
           D+DGEKAP VK ESKILV SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  DNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETL 146
           KFTEGCRAFRAAF+SILKKNISDETL
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETL 146

[Close]

BLAST of Cucsat.G10702 vs. NCBI nr
Match: KAA0059257.1 (RRP15-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (640), Expect = 1.41e-80
Identity = 134/146 (91.78%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPR+MGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
            +DGEKAP VK ESKILV SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  GNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETL 146
           KFTEGCRAFRAAF+SILKKNISDETL
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETL 146

[Close]

BLAST of Cucsat.G10702 vs. NCBI nr
Match: TYK03372.1 (RRP15-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (640), Expect = 1.60e-80
Identity = 134/146 (91.78%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPR+MGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
            +DGEKAP VK ESKILV SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  GNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETL 146
           KFTEGCRAFRAAF+SILKKNISDETL
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETL 146

[Close]

BLAST of Cucsat.G10702 vs. NCBI nr
Match: XP_038888922.1 (RRP15-like protein [Benincasa hispida] >XP_038888940.1 RRP15-like protein [Benincasa hispida])

HSP 1 Score: 234 bits (597), Expect = 5.06e-74
Identity = 128/146 (87.67%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           M DVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVK+D+KMKKLFQKRAREYNS+DD
Sbjct: 1   MADVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSEDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
           D+D EKAP V+ E K+LV SH EEVGDEEFSEGE+E KDVNADVELSEDDENGEIQPGIT
Sbjct: 61  DND-EKAPMVENERKVLVCSHAEEVGDEEFSEGEDEGKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETL 146
           KF EGCRAFRAAF SILKK+ISDETL
Sbjct: 121 KFAEGCRAFRAAFRSILKKSISDETL 145

[Close]

BLAST of Cucsat.G10702 vs. ExPASy TrEMBL
Match: A0A0A0K320 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1)

HSP 1 Score: 271 bits (694), Expect = 5.03e-89
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
           DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETL 146
           KFTEGCRAFRAAFMSILKKNISDETL
Sbjct: 121 KFTEGCRAFRAAFMSILKKNISDETL 146

[Close]

BLAST of Cucsat.G10702 vs. ExPASy TrEMBL
Match: A0A1S3CFX9 (RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1)

HSP 1 Score: 255 bits (651), Expect = 1.67e-82
Identity = 136/146 (93.15%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPRMMGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
           D+DGEKAP VK ESKILV SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  DNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETL 146
           KFTEGCRAFRAAF+SILKKNISDETL
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETL 146

[Close]

BLAST of Cucsat.G10702 vs. ExPASy TrEMBL
Match: A0A5A7UXA3 (RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001920 PE=3 SV=1)

HSP 1 Score: 251 bits (640), Expect = 6.85e-81
Identity = 134/146 (91.78%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPR+MGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
            +DGEKAP VK ESKILV SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  GNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETL 146
           KFTEGCRAFRAAF+SILKKNISDETL
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETL 146

[Close]

BLAST of Cucsat.G10702 vs. ExPASy TrEMBL
Match: A0A5D3BX18 (RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663G00070 PE=3 SV=1)

HSP 1 Score: 251 bits (640), Expect = 7.75e-81
Identity = 134/146 (91.78%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPR+MGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
            +DGEKAP VK ESKILV SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  GNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETL 146
           KFTEGCRAFRAAF+SILKKNISDETL
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETL 146

[Close]

BLAST of Cucsat.G10702 vs. ExPASy TrEMBL
Match: A0A6J1GMJ1 (LOW QUALITY PROTEIN: RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455323 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.31e-62
Identity = 116/146 (79.45%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           M D  NAVELVRGAKRRKKMGSRN KRPRMMGGSGNKVK+ +KMKKLFQKRA EYN DD+
Sbjct: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVKVHRKMKKLFQKRAXEYNLDDN 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
           DDD EKAP +  E+K  + SHE EVGDEEFSEGEEE KD+NAD+E SEDDENG+IQPGI 
Sbjct: 61  DDD-EKAPVIGDETKTSMLSHE-EVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIA 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETL 146
           KFTEGCRAFRAA  SILKK+ISDETL
Sbjct: 121 KFTEGCRAFRAALRSILKKSISDETL 144

The following BLAST results are available for this feature:

BLAST of Cucsat.G10702 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G10702 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144556.1	1.04e-88	100.00	RRP15-like protein [Cucumis sativus] >XP_011658649.1 RRP15-like protein [Cucumis...	[more]
XP_008462030.1	3.45e-82	93.15	PREDICTED: RRP15-like protein [Cucumis melo]	[more]
KAA0059257.1	1.41e-80	91.78	RRP15-like protein [Cucumis melo var. makuwa]	[more]
TYK03372.1	1.60e-80	91.78	RRP15-like protein [Cucumis melo var. makuwa]	[more]
XP_038888922.1	5.06e-74	87.67	RRP15-like protein [Benincasa hispida] >XP_038888940.1 RRP15-like protein [Benin...	[more]

BLAST of Cucsat.G10702 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K320	5.03e-89	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1	[more]
A0A1S3CFX9	1.67e-82	93.15	RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1	[more]
A0A5A7UXA3	6.85e-81	91.78	RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0...	[more]
A0A5D3BX18	7.75e-81	91.78	RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663...	[more]
A0A6J1GMJ1	1.31e-62	79.45	LOW QUALITY PROTEIN: RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 163..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..118
IPR012459	Ribosomal RNA-processing protein 15	PFAM	PF07890	Rrp15p	coord: 129..248 e-value: 9.2E-20 score: 71.3
IPR012459	Ribosomal RNA-processing protein 15	PANTHER	PTHR13245	RRP15-LIKE PROTEIN	coord: 18..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G10702.T1	Cucsat.G10702.T1	mRNA
Cucsat.G10702.T6	Cucsat.G10702.T6	mRNA
Cucsat.G10702.T5	Cucsat.G10702.T5	mRNA
Cucsat.G10702.T2	Cucsat.G10702.T2	mRNA
Cucsat.G10702.T3	Cucsat.G10702.T3	mRNA
Cucsat.G10702.T4	Cucsat.G10702.T4	mRNA
Cucsat.G10702.T8	Cucsat.G10702.T8	mRNA
Cucsat.G10702.T7	Cucsat.G10702.T7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0030687	preribosome, large subunit precursor