Cucsat.G10389 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G10389
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	U-box domain-containing protein 2-like
Location	ctg1675: 1559853 .. 1562845 (-)
RNA-Seq Expression	Cucsat.G10389
Synteny	Cucsat.G10389

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGTTGCTTAAAGCCACGCTCTTCTCTTCTCTTCCTCTTAAATCTCTCTCACATCTCTCTAACTCACCACCCCCTTCTTCCTCCCTCATGGATTATTGCACCTCTCCCTCCGCCACCCACCACCGCACCTCCTCCGCCTCCTCTCCCGACGCCGCCGTTCTTAAGGCTCTCCTCCTTGTTCAATCCGACGCTCTCGATTCCAAGTTCCAAGGCGCCTCTGAAATTCGCCGACTCACCAAAACCTCCCAACGCTGCCGCCGTCACCTCTCTCAATCAATCCCCCATCTCGTCTCCATGCTCCACCGCCTTCACTCCCCTGAATCCCACCTCGAGGCCGCTCTCCTTGCTCTTCTCAACCTTGCCGTTAAGGATGAAAAGTAATTAATTCCCTCCTAGATCTCTTTTGCCTTCTATTTCACTTGATTCCTTTTCATTCTTTTTTAAATTTGGATTGACTTTACTCTTTCCGTTTACTTTAATCTTTTTTTTTTTTTTAATTAGTTTCGCTTTTTTATTTGTTTCATCAAATCAGCGATACCTCATGAGGTTTTATGGCTAGTTATATTATTTTCTTACTTTTGTTTGGCCGGTGAGAATAAGGGAATGTAAAATGTAAAAAAAGTAGACGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATGAGGAAGAAAATCTATCTCAAAAGAAATTTAAATGTGTTGATTGGCCAATTAAATAGAGACATGCTTTCTTGGATTCCCTTAAGATGACGATTTTCTTTTATATTGACTATGTTTTTTGAATTGATAAAGAATTTGCTAGCTCTATATTTGTGTTTGTCCTGTTGGGCTTCGTTTATTCTATTGTTAATTATACTGTTGTTATTTTGTGGCTTTAGTTGTTGGAGGCTTCCCCTTTTCCCCCCCTTTTTTTTTTATTTTTGCAATGTGGTTGGCATGGCACGCGGTGGTTGAGGTCTTCAAAAGAAATGGATAATGTGTTTATTTTGTCTGTTTTCTATTTGAAATGAAAGTCTCCAGATATTTTCATTCTTCATGATTTAAGGTCCATGGGAAATATGTTGTTATTAGTATATATGATATTTCTCTTAGTTACTACTTTTTGATGTGATGTGGGATGATCTGTTTTTGAGTGATTTGAAGAAACATTATTTGAAGGTTTCGTAGAAAAGGTATTCAACGTATAGACTCAATCTTTCGAAATTGAAACATGATTTTCTTTATAACTGGTTTGTTACTCTGTTGATTTTCGTATTATCTCCTCTGCTCTTTCATTAGCTTGTTTATACCTTACAGGAACCTCCCCTCCCCATTTGACTGCACTCTTGCTAACTAAACTCATTGGCCTACATATAATTGGCTCCTCCATCCGTACATGCACGCTGACTGTATCTTGCACATGTGCTATTTCGCTGTTCTTTACTTGTTCCTTGCACATGATATTGCCCTGTCTTGTTCCTTCTATAGCAGTTTTGAAAATTTTCCTAGAAAGTTTTGGTCTAAATTTCAGTTTGTGGAACTCCTGTTCACATCATGTTTTAAACTGTTTCAGTACCATGAATGATACTGTTTGCTGAAGGAAGAATATAGCTGTAGTGATTTTTGTGTTAGGTAATGTAATGAGATTTGATTTTGTTAATTTAATGGCATCTGTTTCTTTAGTTTGTTCGTGGTAGGTTTCTGATAATTGATTCCATGTGTAACACTGACTTTTAGTACCAATCCTTCATATATTAATTTATTGTAATAATATGCCTACAGGAATAAGATCAAGATTGTAGAAGCTGGTGCCTTGGGACCAATAATTGGTTTTCTTCAGTCAGAGAGTTTGATACTACAGGAGAATGCAACTGCTTCTTTACTCACTCTATCTGCTTCTACTGTCAATAAGCCATTAATAAGTGCTGCCGGTGCCATTCCTCTCCTTGTGGAGATTCTTAGATGTGGAAGCCCACAAGCAAAGGCAGATGCTGTAATGGCCCTTTCCAATCTTTCAACACTTCCACATAATCTTAGCATCATTCTAGATTCAAACCCAGTCCCTGCAATAGTTAGTCTATTGAAAACTTGTAAAAAATCTTCAAAAACTGCTGAAAAATGCTGCTCACTGATTGAATACTTAGTTGGTTTTGATGAAGGCAGAATAGCATTGACATCTGAAGAAGGTGGAGTTCTTGCTGTTGTCGAAGTACTCGAGAATGGCTCTCTTCAAAGTCGTGATCATGCTGTTGGTGCACTATTGACAATGTGTGAGAGTGACCGGTGCAAATACAGAGAACCTATCTTGGGAGAAGGGGTAATCCCAGGCCTTCTTGAACTTACTGTCCAAGGGACACCTAAATCCCAGTCAAAGGCTAAAACCCTCCTAAGGCTATTAAGAGACTCTCCATATCCAAGATCTGAACTTCAAGCAGACACAATCGAGAACATTGTTTGTAACATTATCTCTCAAATTGATGGAGACGATGATCAATCTAGTAAAGCAAAGAAGATGCTGGCAGAGATGGTGCAAGTAAGTATGGAACAAAGCTTGAGGCATTTACAAAGAAGGGCTCTGGTATGCACACCCACTGAAATGCCTATTAATACATGCACCTCTGAAGTTTCTTCAAAGTAATAAAATTTGTACTTAGCTTTGTCCATGGAGTTTGTAACATAAACTTCTATAGTTGTTACTGTTAGAGAACAGGATCATAAAATAAGATGAATAGGAAAACAAGCCAGTCCAGGCAGGTAGTGGGAGTGTCGGGAGACTGGTAAAATGTCAATAAAACTGGGAATGGGATCTGTACGAGGCTTAAATCATACTCTTTTTTTCTTTCCTTTTTGCTTGTTTTGTATATCTTCTGTGTATTACATTAAAGAAATAGTGAAGTTTATAAGTGTTCGTCCCCTTCTGATTGTTACGTGTCCTTCTCTTATGGTACATAAATATTGAGTTGTTTGGCCCTTATTAAATCAACTTCAATAGTGTTATTACTGAAGTTTGCACATGTATCAGTGACTTTATTTTTATTTTCTCAATTTCTTGTAGAGATCTTCATCTTATAACTTTCCGCACCCAGACTTTCTAACTCTAACATATTAACTATGTACTTCATAACTCAATTCAACATCTCTTGGACATGTTGTATGATACAATGGAGAAACTAGTGTCATTTTCTCATGGGTTTATGTGAGTTTGAATTGTCATGTCTGTGATATTTATGAATTATTAGAAGGGTACTAACTTTAGCTTCTTCATGTGCATGTACATAGCATAAAGCCAAAGTACTCGATGATCACAAGGCAAAAGAAAGGTAATCAGGAAAGAAGGATAAGGAAACTAGGAATAGGTTCTTTCCTTGGGTTACAAGTGATTTTTGTGCAACTCTTGCCTTGGATACCCTTTCTATCCAAACCTTGTTTGAAGGAGAAAGAGGAAATGAATCTTCATTCTAACTTGCTATCACTACACATATGCACACACGTGTCTAAAAGTAGAAGGCACATCCCTTTTTTTAACCTCATTTACGTAAAGCTAGAATGATTGGGCAAGGACCATTTAGTCCTTCAGTAATTTCAAGAAACATAGTGCTCTCAGATTACGCTCATATCAATGAGAAAGGCTTCAAGTTGTTTTC

Coding sequence (CDS)

CTGTTGCTTAAAGCCACGCTCTTCTCTTCTCTTCCTCTTAAATCTCTCTCACATCTCTCTAACTCACCACCCCCTTCTTCCTCCCTCATGGATTATTGCACCTCTCCCTCCGCCACCCACCACCGCACCTCCTCCGCCTCCTCTCCCGACGCCGCCGTTCTTAAGGCTCTCCTCCTTGTTCAATCCGACGCTCTCGATTCCAAGTTCCAAGGCGCCTCTGAAATTCGCCGACTCACCAAAACCTCCCAACGCTGCCGCCGTCACCTCTCTCAATCAATCCCCCATCTCGTCTCCATGCTCCACCGCCTTCACTCCCCTGAATCCCACCTCGAGGCCGCTCTCCTTGCTCTTCTCAACCTTGCCGTTAAGGATGAAAAGAATAAGATCAAGATTGTAGAAGCTGGTGCCTTGGGACCAATAATTGGTTTTCTTCAGTCAGAGAGTTTGATACTACAGGAGAATGCAACTGCTTCTTTACTCACTCTATCTGCTTCTACTGTCAATAAGCCATTAATAAGTGCTGCCGGTGCCATTCCTCTCCTTGTGGAGATTCTTAGATGTGGAAGCCCACAAGCAAAGGCAGATGCTGTAATGGCCCTTTCCAATCTTTCAACACTTCCACATAATCTTAGCATCATTCTAGATTCAAACCCAGTCCCTGCAATAGTTAGTCTATTGAAAACTTGTAAAAAATCTTCAAAAACTGCTGAAAAATGCTGCTCACTGATTGAATACTTAGTTGGTTTTGATGAAGGCAGAATAGCATTGACATCTGAAGAAGGTGGAGTTCTTGCTGTTGTCGAAGTACTCGAGAATGGCTCTCTTCAAAGTCGTGATCATGCTGTTGGTGCACTATTGACAATGTGTGAGAGTGACCGGTGCAAATACAGAGAACCTATCTTGGGAGAAGGGGTAATCCCAGGCCTTCTTGAACTTACTGTCCAAGGGACACCTAAATCCCAGTCAAAGGCTAAAACCCTCCTAAGGCTATTAAGAGACTCTCCATATCCAAGATCTGAACTTCAAGCAGACACAATCGAGAACATTGTTTGTAACATTATCTCTCAAATTGATGGAGACGATGATCAATCTAGTAAAGCAAAGAAGATGCTGGCAGAGATGGTGCAAGTAAGTATGGAACAAAGCTTGAGGCATTTACAAAGAAGGGCTCTGCATAAAGCCAAAGTACTCGATGATCACAAGGCAAAAGAAAGGTAA

Protein sequence

LLLKATLFSSLPLKSLSHLSNSPPPSSSLMDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHLSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHNLSIILDSNPVPAIVSLLKTCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALHKAKVLDDHKAKER

Homology

[Close]

BLAST of Cucsat.G10389 vs. ExPASy Swiss-Prot
Match: O22193 (U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 SV=3)

HSP 1 Score: 79.0 bits (193), Expect = 8.0e-14
Identity = 66/181 (36.46%), Postives = 104/181 (57.46%), Query Frame = 0


Query: 47  SSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHLSQSIPHLVSMLHRLHSP 106
           S  +  V K +  ++S +LD++ Q  +E+R L K +   R  +  S   +V ++  L+S 
Sbjct: 537 SEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNS-GAIVLLVELLYST 596

Query: 107 ESHL-EAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESLILQENATASLLTLSAS 166
           +S   E A+ ALLNL++ D  NK  I +AGA+ P+I  L++ S   +EN+ A+L +LS  
Sbjct: 597 DSATQENAVTALLNLSIND-NNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVI 656

Query: 167 TVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHNLSIILDSNPVPAILVL 226
             NK  I  +GAI  LV++L  G+P+ K DA  AL NLS    N ++I+ S  V  ++ L
Sbjct: 657 EENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDL 715

[Close]

BLAST of Cucsat.G10389 vs. ExPASy Swiss-Prot
Match: Q9ZV31 (U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.4e-12
Identity = 70/190 (36.84%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 43  TSSASSPD---AAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHLSQS--IPHLV 102
           +SS+S+PD     + + LL + S   + +   A EIR L K +   R  ++ S  IP LV
Sbjct: 344 SSSSSAPDDEHNKIEELLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLV 403

Query: 103 SMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIV-EAGALGPIIGFLQSESLILQENAT 162
           ++L  + +     E A+ ++LNL++  E NK KIV  +GA+  I+  LQ  S+  +ENA 
Sbjct: 404 NLL-TISNDSRTQEHAVTSILNLSICQE-NKGKIVYSSGAVPGIVHVLQKGSMEARENAA 463

Query: 163 ASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHNLSIILDS 222
           A+L +LS    NK  I AAGAIP LV +L  GS + K DA  AL NL     N    + +
Sbjct: 464 ATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRA 523

Query: 223 NPVPAILVLM 227
             VP ++ L+
Sbjct: 524 GLVPVLMRLL 531

[Close]

BLAST of Cucsat.G10389 vs. ExPASy Swiss-Prot
Match: Q5VRH9 (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.5e-12
Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 42  RTSSASSPDAAVLKALL-LVQSDALDSKFQGASEIRRLTKTSQRCRRHLSQ--SIPHLVS 101
           + + +S  D A L +L+  ++S   D +   A EIR L K +   R  +++  +IP LV+
Sbjct: 313 KAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVN 372

Query: 102 MLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESLILQENATAS 161
           +L    S     E A+ ALLNL++  E NK  IV++ A+  I+  L++ S+  +ENA A+
Sbjct: 373 LLS--SSDPRTQEHAVTALLNLSI-HENNKASIVDSHAIPKIVEVLKTGSMETRENAAAT 432

Query: 162 LLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNL 204
           L +LS    NK  I AAGAIP L+ +L  GSP+ K DA  A+ NL
Sbjct: 433 LFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNL 474

[Close]

BLAST of Cucsat.G10389 vs. ExPASy Swiss-Prot
Match: Q8GUG9 (U-box domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUB11 PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 9.8e-12
Identity = 62/183 (33.88%), Postives = 106/183 (57.92%), Query Frame = 0


Query: 47  SSPDAAVLKALL-LVQSDALDSKFQGASEIRRLTKTSQRCRRHLSQ--SIPHLVSMLHRL 106
           +S D +V++AL+  + S + + +    SEIR L+K S   R  +++  +IP LV++L   
Sbjct: 326 NSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLL--T 385

Query: 107 HSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESLILQENATASLLTLS 166
               +  E A+  +LNL++  E NK  I+ AGA+  I+  L++ ++  +ENA A+L +LS
Sbjct: 386 SEDVATQENAITCVLNLSIY-ENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLS 445

Query: 167 ASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHNLSIILDSNPVPAIL 226
            +  NK +I  +GAIP LV++L  G+P+ K DA  AL NL     N    + +  V A++
Sbjct: 446 LADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALV 505

[Close]

BLAST of Cucsat.G10389 vs. ExPASy Swiss-Prot
Match: Q9C9A6 (U-box domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=PUB10 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 60/159 (37.74%), Postives = 96/159 (60.38%), Query Frame = 0


Query: 48  SPDAAVLKALLL-VQSDALDSKFQGASEIRRLTKTSQRCRRHLSQ--SIPHLVSMLHRLH 107
           S D + ++AL+  + S +++ +    SEIR L+K S   R  +++  +IP LV +L    
Sbjct: 337 SGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDG 396

Query: 108 SPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESLILQENATASLLTLSA 167
             E+  E A+  +LNL++  E NK  I+ AGA+  I+  L++ S+  +ENA A+L +LS 
Sbjct: 397 DTETQ-ENAVTCILNLSIY-EHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSL 456

Query: 168 STVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNL 204
           +  NK +I A+GAI  LV++L+ GS + K DA  AL NL
Sbjct: 457 ADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNL 493

[Close]

BLAST of Cucsat.G10389 vs. NCBI nr
Match: KAE8648428.1 (hypothetical protein Csa_009149 [Cucumis sativus])

HSP 1 Score: 355 bits (912), Expect = 8.62e-120
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 30  MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 89
           MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL
Sbjct: 1   MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 60

Query: 90  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 149
           SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL
Sbjct: 61  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 120

Query: 150 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN 209
           ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN
Sbjct: 121 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN 180

Query: 210 LSIILDSNPVPAILVLMK 227
           LSIILDSNPVPAI+ L+K
Sbjct: 181 LSIILDSNPVPAIVSLLK 198

[Close]

BLAST of Cucsat.G10389 vs. NCBI nr
Match: XP_004140305.1 (U-box domain-containing protein 2 [Cucumis sativus])

HSP 1 Score: 355 bits (912), Expect = 1.02e-119
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 30  MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 89
           MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL
Sbjct: 1   MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 60

Query: 90  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 149
           SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL
Sbjct: 61  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 120

Query: 150 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN 209
           ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN
Sbjct: 121 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN 180

Query: 210 LSIILDSNPVPAILVLMK 227
           LSIILDSNPVPAI+ L+K
Sbjct: 181 LSIILDSNPVPAIVSLLK 198

[Close]

BLAST of Cucsat.G10389 vs. NCBI nr
Match: XP_008460513.1 (PREDICTED: U-box domain-containing protein 2 isoform X1 [Cucumis melo] >KAA0062343.1 U-box domain-containing protein 2 isoform X1 [Cucumis melo var. makuwa] >TYK26633.1 U-box domain-containing protein 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 343 bits (879), Expect = 1.07e-114
Identity = 190/199 (95.48%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 30  MDYCTSPSATHH-RTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRH 89
           MDYCTSPSATHH RT++ASSPDAA+ KALLLVQSDALDSKFQGA EIRRLTKTSQRCRRH
Sbjct: 1   MDYCTSPSATHHHRTTAASSPDAALHKALLLVQSDALDSKFQGACEIRRLTKTSQRCRRH 60

Query: 90  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 149
           LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES
Sbjct: 61  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 120

Query: 150 LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH 209
           LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH
Sbjct: 121 LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH 180

Query: 210 NLSIILDSNPVPAILVLMK 227
           NLSIILDSNPVPAI+ L+K
Sbjct: 181 NLSIILDSNPVPAIVSLLK 199

[Close]

BLAST of Cucsat.G10389 vs. NCBI nr
Match: XP_038876343.1 (U-box domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 326 bits (835), Expect = 5.03e-108
Identity = 182/199 (91.46%), Postives = 188/199 (94.47%), Query Frame = 0


Query: 30  MDYCTSPSATHHRTS-SASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRH 89
           MDYC+SPS  HHR + SASSPDAAV KALLLVQSD+LDSKF GA EIRRLTKTSQRCRRH
Sbjct: 1   MDYCSSPSGNHHRAAASASSPDAAVQKALLLVQSDSLDSKFLGACEIRRLTKTSQRCRRH 60

Query: 90  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 149
           LSQSIPHLVSMLHR HSPESHLEAALLALLNLAVKDEKNKIKIV AGALGPIIGFLQSES
Sbjct: 61  LSQSIPHLVSMLHRHHSPESHLEAALLALLNLAVKDEKNKIKIVGAGALGPIIGFLQSES 120

Query: 150 LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH 209
           LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH
Sbjct: 121 LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH 180

Query: 210 NLSIILDSNPVPAILVLMK 227
           NLSIILDS PVP+I+ L+K
Sbjct: 181 NLSIILDSKPVPSIVSLLK 199

[Close]

BLAST of Cucsat.G10389 vs. NCBI nr
Match: KAG7016552.1 (U-box domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313 bits (801), Expect = 6.71e-103
Identity = 176/198 (88.89%), Postives = 185/198 (93.43%), Query Frame = 0


Query: 30  MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 89
           MDY +SPS +HHRT  A S +AAVLKALLLVQSDALDSK QGA EIRRLTKTSQRCRR L
Sbjct: 1   MDYYSSPSGSHHRT--AVSTEAAVLKALLLVQSDALDSKLQGACEIRRLTKTSQRCRRQL 60

Query: 90  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 149
           S+SIPHLVSMLH LH P+SHLEAALLALLNLAVKDEKNKIKIVEAGALGPI+GFLQSESL
Sbjct: 61  SESIPHLVSMLHPLHYPDSHLEAALLALLNLAVKDEKNKIKIVEAGALGPIVGFLQSESL 120

Query: 150 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN 209
           ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLP N
Sbjct: 121 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPSN 180

Query: 210 LSIILDSNPVPAILVLMK 227
           LSIILDSNPVP+I+ L+K
Sbjct: 181 LSIILDSNPVPSIVSLLK 196

[Close]

BLAST of Cucsat.G10389 vs. ExPASy TrEMBL
Match: A0A0A0KNA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G418780 PE=4 SV=1)

HSP 1 Score: 355 bits (912), Expect = 4.92e-120
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 30  MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 89
           MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL
Sbjct: 1   MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 60

Query: 90  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 149
           SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL
Sbjct: 61  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 120

Query: 150 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN 209
           ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN
Sbjct: 121 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN 180

Query: 210 LSIILDSNPVPAILVLMK 227
           LSIILDSNPVPAI+ L+K
Sbjct: 181 LSIILDSNPVPAIVSLLK 198

[Close]

BLAST of Cucsat.G10389 vs. ExPASy TrEMBL
Match: A0A5A7V2N1 (U-box domain-containing protein 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002790 PE=4 SV=1)

HSP 1 Score: 343 bits (879), Expect = 5.18e-115
Identity = 190/199 (95.48%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 30  MDYCTSPSATHH-RTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRH 89
           MDYCTSPSATHH RT++ASSPDAA+ KALLLVQSDALDSKFQGA EIRRLTKTSQRCRRH
Sbjct: 1   MDYCTSPSATHHHRTTAASSPDAALHKALLLVQSDALDSKFQGACEIRRLTKTSQRCRRH 60

Query: 90  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 149
           LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES
Sbjct: 61  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 120

Query: 150 LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH 209
           LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH
Sbjct: 121 LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH 180

Query: 210 NLSIILDSNPVPAILVLMK 227
           NLSIILDSNPVPAI+ L+K
Sbjct: 181 NLSIILDSNPVPAIVSLLK 199

[Close]

BLAST of Cucsat.G10389 vs. ExPASy TrEMBL
Match: A0A1S3CC78 (U-box domain-containing protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499314 PE=4 SV=1)

HSP 1 Score: 343 bits (879), Expect = 5.18e-115
Identity = 190/199 (95.48%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 30  MDYCTSPSATHH-RTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRH 89
           MDYCTSPSATHH RT++ASSPDAA+ KALLLVQSDALDSKFQGA EIRRLTKTSQRCRRH
Sbjct: 1   MDYCTSPSATHHHRTTAASSPDAALHKALLLVQSDALDSKFQGACEIRRLTKTSQRCRRH 60

Query: 90  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 149
           LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES
Sbjct: 61  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 120

Query: 150 LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH 209
           LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH
Sbjct: 121 LILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPH 180

Query: 210 NLSIILDSNPVPAILVLMK 227
           NLSIILDSNPVPAI+ L+K
Sbjct: 181 NLSIILDSNPVPAIVSLLK 199

[Close]

BLAST of Cucsat.G10389 vs. ExPASy TrEMBL
Match: A0A6J1FLL3 (U-box domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445077 PE=4 SV=1)

HSP 1 Score: 311 bits (798), Expect = 9.25e-103
Identity = 175/198 (88.38%), Postives = 185/198 (93.43%), Query Frame = 0


Query: 30  MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 89
           MDY +SPS +HHRT+   S +AAVLKALLLVQSDALDSK QGA EIRRLTKTSQRCRR L
Sbjct: 1   MDYYSSPSGSHHRTTV--STEAAVLKALLLVQSDALDSKLQGACEIRRLTKTSQRCRRQL 60

Query: 90  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 149
           S+SIPHLVSMLH LH P+SHLEAALLALLNLAVKDEKNKIKIVEAGALGPI+GFLQSESL
Sbjct: 61  SESIPHLVSMLHPLHYPDSHLEAALLALLNLAVKDEKNKIKIVEAGALGPIVGFLQSESL 120

Query: 150 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN 209
           ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLP N
Sbjct: 121 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPSN 180

Query: 210 LSIILDSNPVPAILVLMK 227
           LSIILDSNPVP+I+ L+K
Sbjct: 181 LSIILDSNPVPSIVSLLK 196

[Close]

BLAST of Cucsat.G10389 vs. ExPASy TrEMBL
Match: A0A6J1JR59 (U-box domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489079 PE=4 SV=1)

HSP 1 Score: 310 bits (795), Expect = 2.63e-102
Identity = 175/198 (88.38%), Postives = 185/198 (93.43%), Query Frame = 0


Query: 30  MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 89
           MDY +SPS +HHRT  A S +AAVLKALLLVQSDALDSK QGA EIRRLTKTSQRCRR L
Sbjct: 1   MDYYSSPSESHHRT--AVSTEAAVLKALLLVQSDALDSKLQGACEIRRLTKTSQRCRRQL 60

Query: 90  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 149
           S+SIPHLVSMLH LH P+SHLEAALLALLNLAVKDEKNKIKIVEAGALGPI+GFLQSESL
Sbjct: 61  SESIPHLVSMLHPLHYPDSHLEAALLALLNLAVKDEKNKIKIVEAGALGPIVGFLQSESL 120

Query: 150 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHN 209
           ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLP N
Sbjct: 121 ILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPSN 180

Query: 210 LSIILDSNPVPAILVLMK 227
           LSIIL+SNPVP+I+ L+K
Sbjct: 181 LSIILNSNPVPSIVSLLK 196

The following BLAST results are available for this feature:

BLAST of Cucsat.G10389 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22193	8.0e-14	36.46	U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 S...	[more]
Q9ZV31	4.4e-12	36.84	U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2...	[more]
Q5VRH9	7.5e-12	38.18	U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]
Q8GUG9	9.8e-12	33.88	U-box domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUB11 PE=2...	[more]
Q9C9A6	1.3e-11	37.74	U-box domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=PUB10 PE=2...	[more]

BLAST of Cucsat.G10389 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648428.1	8.62e-120	98.48	hypothetical protein Csa_009149 [Cucumis sativus]	[more]
XP_004140305.1	1.02e-119	98.48	U-box domain-containing protein 2 [Cucumis sativus]	[more]
XP_008460513.1	1.07e-114	95.48	PREDICTED: U-box domain-containing protein 2 isoform X1 [Cucumis melo] >KAA00623...	[more]
XP_038876343.1	5.03e-108	91.46	U-box domain-containing protein 2 [Benincasa hispida]	[more]
KAG7016552.1	6.71e-103	88.89	U-box domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cucsat.G10389 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNA6	4.92e-120	98.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G418780 PE=4 SV=1	[more]
A0A5A7V2N1	5.18e-115	95.48	U-box domain-containing protein 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CC78	5.18e-115	95.48	U-box domain-containing protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1FLL3	9.25e-103	88.38	U-box domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JR59	2.63e-102	88.38	U-box domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC1114890...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 2..140 e-value: 3.1E-10 score: 41.7
None	No IPR available	PANTHER	PTHR23315	U BOX DOMAIN-CONTAINING	coord: 9..145
None	No IPR available	PANTHER	PTHR23315:SF65	ARM REPEAT SUPERFAMILY PROTEIN	coord: 9..145
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 14..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G10389.T2	Cucsat.G10389.T2	mRNA
Cucsat.G10389.T1	Cucsat.G10389.T1	mRNA
Cucsat.G10389.T3	Cucsat.G10389.T3	mRNA
Cucsat.G10389.T9	Cucsat.G10389.T9	mRNA
Cucsat.G10389.T4	Cucsat.G10389.T4	mRNA
Cucsat.G10389.T6	Cucsat.G10389.T6	mRNA
Cucsat.G10389.T7	Cucsat.G10389.T7	mRNA
Cucsat.G10389.T8	Cucsat.G10389.T8	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding