Cucsat.G10362 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G10362
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Protein SIS2
Location	ctg1675: 782240 .. 784487 (-)
RNA-Seq Expression	Cucsat.G10362
Synteny	Cucsat.G10362

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCAAGGAGCCAAGTAATAGCATCGTAGTTTGCTTACATTAATTTTGAAAAATACATAAACTTCACATTTGTTTCAAATGGGTAATTGTGAAGAGGTCCATTGAATTGGAGTTGGGCCATCCATTATCATCACACCCATTTACATAACAACAACTTCAAGCCTTCAACAATGTCCATTCCAATTCCATACACTTCCAATAGGCAATAGCCATGGCCAGGTTCCTTATCTCCACCCGACCCTTTCCCTTTTCCACTCTCCCCCTTGCTCCCCCACGGCCATTCTTCAGACCCTCCATTTTTTCCCCGCCGGTCAGATTCTTCGCCAACCCATCGCCCTCCAGGACCTTACGAGTCGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACTGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGGTAACCTCTATTATTCATTTCTAATTTCGCTTCATTTTGTTTGCGGAACTGAATTTGATGAGATTCTGGTGGTTTGCCGTTCAAGTTTGGTTTAGATAAGTTTACTTGAGCTTTGAAATGAGACTTCTATTGTACTGAGGTTTGTGTTTGATTTAATTAAGGCTTACTGTCAACTGTTGAGGAATATCACATTTGCTTATGTTTTACTGTTACAATATGTATGGTTGTTTTGTTTTATGATTTTAGTCTTTGAAGACATGGCTTGGCTTCTTCACATGGCAGCACCTAAACTAGGATTATGCAGTGTTTTATGGGTTTATTGAGGTCAAATATTACAGGGTTGAGACATTGTTACCAAGATGCATTCGAGCTAGCTCTGCAAGAACTGGTTTTACTTACTTATCCATGGGGGTGATTGCTTCAATTTGTTAAGCACACTTTCAAGTTCAATGGGATCAGAAAAAGGAGAGACACCCCCACGGTCCCACCCACGCTAAAGCTGCCCCCTTTGTTCATCAATGCTCAAAAGCTTATTTTTGTAGATTCATGGCCATTTGATTAGATGATCCCCAATTGAATTGGATAATCTAGTACCAGTAAGCTCGAGAGAGGGCCTCATACGTCCTCATTTCTCGCCAATTACCACTACCACTGAGCTTGAGAGAGAGTACCTTAAGGCCAGTTCTGAGATGTTAAATGACTAGACCATGGTTTAATAACCATTTAGTTTATGAGAACTATGCTCTTTTTTTTTGTCACAACTTGTTTTTATATTTCCTAGAGAAATATATGAATTATTATAGCCAAATTTCAAAATGAAACATGTTTTTCAAAACTTAACTTGGACTTTAAAGCTTAAGAAGTAAATAGCAGGAAAAACAAAATCAGATGTGAAAGTAATATTTATAAGCTTAGTTTTCAAAAACCAAAGTTCTTCCCACCTTGGACACCCCATAGGCCTAATGTTCATAACTTACAAGTTTTCCATGTGTGAAAACCCTAAATTAGGACTTCGAAGGCATCCCAAAGCATCTCAAGTTCTTCCCACCTTGATTACCTCGTAGACCTTGCTTAAAGCAGGAATATTTTGGAAGCATTAAAATAGGGAGAGGAAGAAGATGGCAAAGACCATCATGGATGTGTTCGATCATGTAGCTTCACTTAAATTCCACATTCTTGGTTATGAAAGAGCTGGAAAAACACATGACATGTTTCGTTTTTATGTATGGGGAACTGATTTTTTAGGGAAATTGATTCCTATGATTGGGGAATGGGCACTGAGCCTTCTGTTGAATTTTGTTTGTGAAACAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACGAAGATGGTTCAGAAATATCTTTTGAAGAAAAACCAACTGTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAAATAAACTGCTTACTTCTTTTTTAGAGGTGTTTATATGATCGAATCAGGTGGCTAAGAAATGGTTCAAGGAACTAAGAAACTTCCATGTATATTGTATGTAATTTTTCCCCCTTAATAATGATTAGTTAAAAGTTGGTCGGAATGCTGATTAGCTTAGATATGTAATTATGTTATTGCATATTCTTCAAACTGAAATATCTGTGGAATGGCCTTGATTATGTTCATCATTCAGTAAAAATATCATTAATGGTTCAAATTCAGTTCTTAAATCTTTAATAAAATTTTAGTTCTTCGTAGTTATTCTTTTAATCTAATTTGGTTGAA

Coding sequence (CDS)

ATGGCCAGGTTCCTTATCTCCACCCGACCCTTTCCCTTTTCCACTCTCCCCCTTGCTCCCCCACGGCCATTCTTCAGACCCTCCATTTTTTCCCCGCCGGTCAGATTCTTCGCCAACCCATCGCCCTCCAGGACCTTACGAGTCGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCACTGTCCTCACTGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACGAAGATGGTTCAGAAATATCTTTTGAAGAAAAACCAACTGTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAA

Protein sequence

MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTVPRTRNRPKREAEV

Homology

[Close]

BLAST of Cucsat.G10362 vs. NCBI nr
Match: XP_004140287.1 (uncharacterized protein LOC101209610 [Cucumis sativus] >KGN51096.1 hypothetical protein Csa_008146 [Cucumis sativus])

HSP 1 Score: 249 bits (636), Expect = 4.90e-83
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV 120

Query: 121 PRTRNRPKREAEV 133
           PRTRNRPKREAEV
Sbjct: 121 PRTRNRPKREAEV 133

[Close]

BLAST of Cucsat.G10362 vs. NCBI nr
Match: XP_008465810.1 (PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo])

HSP 1 Score: 226 bits (576), Expect = 7.14e-74
Identity = 124/134 (92.54%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE-DGSEISFEEKPT 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE DG+EISFEEKPT
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120

Query: 121 VPRTRNRPKREAEV 133
           +PRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]

BLAST of Cucsat.G10362 vs. NCBI nr
Match: KAA0050184.1 (protein SIS2 [Cucumis melo var. makuwa] >TYJ98224.1 protein SIS2 [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (522), Expect = 4.95e-65
Identity = 124/177 (70.06%), Postives = 128/177 (72.32%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEE---------------------------- 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEE                            
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEEVTSIHLISLHFVCGTGFWIETLLPRCIQ 120

Query: 121 ---------------LALNQAIMEEDEDYE-DGSEISFEEKPTVPRTRNRPKREAEV 133
                          LALNQAIMEEDEDYE DG+EISFEEKPT+PRTRNRPKREAEV
Sbjct: 121 ASSARTDFTSLSMGQLALNQAIMEEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV 177

[Close]

BLAST of Cucsat.G10362 vs. NCBI nr
Match: XP_038875344.1 (uncharacterized protein LOC120067823 [Benincasa hispida])

HSP 1 Score: 202 bits (513), Expect = 4.09e-64
Identity = 114/134 (85.07%), Postives = 120/134 (89.55%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MA+ LISTRPFPFS+L +APPR FFRPS FSP V F   PS SR LRVVTTRAGASTSSY
Sbjct: 12  MAKLLISTRPFPFSSLSVAPPRAFFRPSNFSPAVTFSGYPSTSRILRVVTTRAGASTSSY 71

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDY-EDGSEISFEEKPT 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDE+  +DGSEISFEEKP 
Sbjct: 72  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEISFEEKPA 131

Query: 121 VPRTRNRPKREAEV 133
           +PRTRNRPKREAEV
Sbjct: 132 LPRTRNRPKREAEV 145

[Close]

BLAST of Cucsat.G10362 vs. NCBI nr
Match: XP_023525740.1 (uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193 bits (491), Expect = 6.42e-61
Identity = 109/134 (81.34%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSY
Sbjct: 1   MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGS-EISFEEKPT 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DGS EISFEEKP 
Sbjct: 61  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 120

Query: 121 VPRTRNRPKREAEV 133
           +PRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]

BLAST of Cucsat.G10362 vs. ExPASy TrEMBL
Match: A0A0A0KTR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440100 PE=4 SV=1)

HSP 1 Score: 249 bits (636), Expect = 2.37e-83
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGSEISFEEKPTV 120

Query: 121 PRTRNRPKREAEV 133
           PRTRNRPKREAEV
Sbjct: 121 PRTRNRPKREAEV 133

[Close]

BLAST of Cucsat.G10362 vs. ExPASy TrEMBL
Match: A0A1S3CQ37 (uncharacterized protein LOC103503402 OS=Cucumis melo OX=3656 GN=LOC103503402 PE=4 SV=1)

HSP 1 Score: 226 bits (576), Expect = 3.46e-74
Identity = 124/134 (92.54%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE-DGSEISFEEKPT 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYE DG+EISFEEKPT
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDGTEISFEEKPT 120

Query: 121 VPRTRNRPKREAEV 133
           +PRTRNRPKREAEV
Sbjct: 121 LPRTRNRPKREAEV 134

[Close]

BLAST of Cucsat.G10362 vs. ExPASy TrEMBL
Match: A0A5D3BGL2 (Protein SIS2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001260 PE=4 SV=1)

HSP 1 Score: 205 bits (522), Expect = 2.40e-65
Identity = 124/177 (70.06%), Postives = 128/177 (72.32%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSY
Sbjct: 1   MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSY 60

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEE---------------------------- 120
           IFAFSIPLSLILITVLTALKIGDNLDKKFLEE                            
Sbjct: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEEVTSIHLISLHFVCGTGFWIETLLPRCIQ 120

Query: 121 ---------------LALNQAIMEEDEDYE-DGSEISFEEKPTVPRTRNRPKREAEV 133
                          LALNQAIMEEDEDYE DG+EISFEEKPT+PRTRNRPKREAEV
Sbjct: 121 ASSARTDFTSLSMGQLALNQAIMEEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV 177

[Close]

BLAST of Cucsat.G10362 vs. ExPASy TrEMBL
Match: A0A6J1HEK5 (uncharacterized protein LOC111462310 OS=Cucurbita moschata OX=3662 GN=LOC111462310 PE=4 SV=1)

HSP 1 Score: 190 bits (482), Expect = 1.04e-59
Identity = 107/134 (79.85%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSY
Sbjct: 12  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSY 71

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGS-EISFEEKPT 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DGS EI FEEKP 
Sbjct: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEIPFEEKPA 131

Query: 121 VPRTRNRPKREAEV 133
           +PRTRNRPKREAE 
Sbjct: 132 LPRTRNRPKREAEA 145

[Close]

BLAST of Cucsat.G10362 vs. ExPASy TrEMBL
Match: A0A6J1JTZ0 (uncharacterized protein LOC111487491 OS=Cucurbita maxima OX=3661 GN=LOC111487491 PE=4 SV=1)

HSP 1 Score: 186 bits (471), Expect = 4.20e-58
Identity = 107/132 (81.06%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   MARFLISTRPFPFSTLPLAPPRPFFRPSIFSPPVRFFANPSPSRTLRVVTTRAGASTSSY 60
           MAR LISTR FPF   PL P R FFRPS  SP VRF  +PS +RTLRVVTTRAGASTSSY
Sbjct: 12  MARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSY 71

Query: 61  IFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEDGS-EISFEEKPT 120
           IFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIMEEDE+ +DGS EISFEEKP 
Sbjct: 72  IFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEEDEENKDGSSEISFEEKPA 131

Query: 121 VPRTRNRPKREA 131
           +PRTRNRPKREA
Sbjct: 132 LPRTRNRPKREA 140

The following BLAST results are available for this feature:

BLAST of Cucsat.G10362 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G10362 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140287.1	4.90e-83	100.00	uncharacterized protein LOC101209610 [Cucumis sativus] >KGN51096.1 hypothetical ...	[more]
XP_008465810.1	7.14e-74	92.54	PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo]	[more]
KAA0050184.1	4.95e-65	70.06	protein SIS2 [Cucumis melo var. makuwa] >TYJ98224.1 protein SIS2 [Cucumis melo v...	[more]
XP_038875344.1	4.09e-64	85.07	uncharacterized protein LOC120067823 [Benincasa hispida]	[more]
XP_023525740.1	6.42e-61	81.34	uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G10362 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTR1	2.37e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440100 PE=4 SV=1	[more]
A0A1S3CQ37	3.46e-74	92.54	uncharacterized protein LOC103503402 OS=Cucumis melo OX=3656 GN=LOC103503402 PE=...	[more]
A0A5D3BGL2	2.40e-65	70.06	Protein SIS2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001260 ...	[more]
A0A6J1HEK5	1.04e-59	79.85	uncharacterized protein LOC111462310 OS=Cucurbita moschata OX=3662 GN=LOC1114623...	[more]
A0A6J1JTZ0	4.20e-58	81.06	uncharacterized protein LOC111487491 OS=Cucurbita maxima OX=3661 GN=LOC111487491...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..133
None	No IPR available	PANTHER	PTHR37753	OS01G0940600 PROTEIN	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G10362.T1	Cucsat.G10362.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane