Csor.00g312300 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g312300
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr15: 1068305 .. 1070491 (+)
RNA-Seq ExpressionCsor.00g312300
SyntenyCsor.00g312300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTCTGTTGGGGTTATTGTGTGTGCTGTGGGGTTATCTTTTCCACCCAGTTTCAATAAATTCCGTGGAGAACTTTTGACCATTTTGATTAGAACTTCAGCATCTGGTTTGCACAGAATTGTATTAGAGTTTCTAAGATTTGGACTGATGGCCGGAAGTAGCCCATTAACTCCGGTACGATGTGGATCGAACTCGAAATAGGGAGGAACGAATCATCCTTTCTCCAAGAACTACAGCCCAGCAGTCACAAGACAAACACTCAAAAGAGACAAAAGGGTTGACTCCTCCATCGTCTACATATTAGAAAGCGCATGATGAAACCTGGCTGAGACTAATGATACAAGAGGACATTAGACATTAAGTAGAGGAAGCCCAAGCCCAAGTGGTGTAAATATGAGTTAGGCTATGATTACAAAATATAATTGTGGAGGACCAAGTAGAAGCAAAAAGAGTGACCAAGTCCCAAAAAATAACCATGTTAATCTCTTGACCAAGAAAAATTCTAGCATTTCTTTCAACCCATAGTCTCCAAAGGAGGGCAAAGACGCGCCCGTTGTACCTCTCAAGGTTCTTGTTATTACGTTGGGTTTTAAAGTTAGGACAACCAAGAGTTTCGTTGCCTATACCATATCGATTGTCTCCAATCGATTAATGGAATGACTGTTAGCTTTACGAGTTCTTTCTCTTCATGATTTACCCCTGAAGACTTAGGTCTCCTCCTGGGTTGATCCAAATACTCCCATTTTAGTTAGTGATTGATGAACTGTGCAGAAGATTACGAAAAAACCTTCTGCACAGTTCATCAATTGTGAAGGCAATGGACTTATCTCCTCAATCTTCTTGAGCTCAAATCTTTGGAACACAACTAGATTTGGCTGGTTGTCCTTTTATTTTGTGTGCTGTTATCGGATCGGCGTGGTTCTATAACATCTGAATTTAGAGGATTAGTAGTTGTACACTACCAGAATTCAGCATTGGTTTGTATTTTGAAATTAGCAAAAGATGCTCAAGAACGTGTTAAAGAGACAAAAGGTGAAAAGTGTCTGTGTTATGAAAAACAATTAAAAAGGAAAAGAGTGGTAGTCATTGGTCAACAGAAAACTATACACAATCATATTGCTCTGGTCTATTCACAAACGCGAAACCTCTCAAAAAGCTGTTAGCAGTGCTCAAAATTGATTGGATATTTTTTTTGTTCGTTTTAATTTTTAAGGGTAATCTGTAATAGCCAAGACCATCCACCACCACTTATTTCTCCATCACATATAAATAATCCAATCATTTTGCTCATTGCTTTCCTTGTTCAGTACACTCAACATCACGATTGCTACTATCTTCACTGCAGAATATGAAACTTAATCAGCGTAGCTACTGTCAAGAAAAATTTTCCTGTACTGGTTTTTCTTAAACACGTCAAATTTGTAAGCAACTTCATTGGTAAAATAAAATGTACAAAATAAGGAATAGCTGAAAAAAATCCTGTCTGAGAAGCTACAGAAACGACACGCAATCAGCTAAACAAAGAAATAAGATAGTTGCAAAAATCTTTAGAAAATCTGTTTCAAGAGGAAGCCAAATGAATGAAACTATCCTGATAATCCTCCCAAAGCCTCTTAATATCATTAAACACTCTTCTCACCATCCACACCACTCGAAGAGGATACCAAGTTGGGGTGAGCCAAGGAACCATTGCCCATAATTTGTTGTCCTGTTGTCATTAGTTTTTAGAACTATATTTGAAATAAAATTACGATGGATCCTTCACTGTGTTTCCATATGGAGCTAACTCAGAAGATCTAAGCTGGCTTTGTATGCCAAAAGTTAAAATCACAATTAAGCATTAATCAACGAAAATGCTCAAATAGTAGTTATTGCAGTTCTTCTTTACGTGCATGATGTTACAGACTGACCGGAGGAAACGACTGAAGACAGAAGAACCATATATGGAGACAGGGACTGGAAAAAATTTCCTCCTCACCCTGGCTTATCTTGGTGCAGACTCAGCTCTCGGATGGTGTGTTGGGGGGGATTTCTTCAAGTTCTCTGAATTTGGGGTAAGGATTATTGACCTGTAGTTCTGTGATCATTTGACGGAGTTCAGAAGTCTGCTCTTTGAGTTGAACATTTTCTTGAACAACCTTGTCATGGCAGTCTGAAACTTGGTTCAACTTATCTATAAGCTGA

mRNA sequence

ATGTTTTCTGTTGGGGTTATTGTGTGTGCTGTGGGGTTATCTTTTCCACCCAGTTTCAATAAATTCCGTGGAGAACTTTTGACCATTTTGATTAGAACTTCAGCATCTGGTTTGCACAGAATTGTATTAGAGTTTCTAAGATTTGGACTGATGGCCGGAAGTAGCCCATTAACTCCGACTGACCGGAGGAAACGACTGAAGACAGAAGAACCATATATGGAGACAGGGACTGGAAAAAATTTCCTCCTCACCCTGGCTTATCTTGGTGCAGACTCAGCTCTCGGATGGTGTGTTGGGGGGGATTTCTTCAAGTTCTCTGAATTTGGGTCTGAAACTTGGTTCAACTTATCTATAAGCTGA

Coding sequence (CDS)

ATGTTTTCTGTTGGGGTTATTGTGTGTGCTGTGGGGTTATCTTTTCCACCCAGTTTCAATAAATTCCGTGGAGAACTTTTGACCATTTTGATTAGAACTTCAGCATCTGGTTTGCACAGAATTGTATTAGAGTTTCTAAGATTTGGACTGATGGCCGGAAGTAGCCCATTAACTCCGACTGACCGGAGGAAACGACTGAAGACAGAAGAACCATATATGGAGACAGGGACTGGAAAAAATTTCCTCCTCACCCTGGCTTATCTTGGTGCAGACTCAGCTCTCGGATGGTGTGTTGGGGGGGATTTCTTCAAGTTCTCTGAATTTGGGTCTGAAACTTGGTTCAACTTATCTATAAGCTGA

Protein sequence

MFSVGVIVCAVGLSFPPSFNKFRGELLTILIRTSASGLHRIVLEFLRFGLMAGSSPLTPTDRRKRLKTEEPYMETGTGKNFLLTLAYLGADSALGWCVGGDFFKFSEFGSETWFNLSIS
Homology
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BLAST of Csor.00g312300 vs. NCBI nr
Match: KAG6578525.1 (hypothetical protein SDJN03_22973, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239 bits (610), Expect = 1.60e-79
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MFSVGVIVCAVGLSFPPSFNKFRGELLTILIRTSASGLHRIVLEFLRFGLMAGSSPLTPT 60
           MFSVGVIVCAVGLSFPPSFNKFRGELLTILIRTSASGLHRIVLEFLRFGLMAGSSPLTPT
Sbjct: 1   MFSVGVIVCAVGLSFPPSFNKFRGELLTILIRTSASGLHRIVLEFLRFGLMAGSSPLTPT 60

Query: 61  DRRKRLKTEEPYMETGTGKNFLLTLAYLGADSALGWCVGGDFFKFSEFGSETWFNLSIS 119
           DRRKRLKTEEPYMETGTGKNFLLTLAYLGADSALGWCVGGDFFKFSEFGSETWFNLSIS
Sbjct: 61  DRRKRLKTEEPYMETGTGKNFLLTLAYLGADSALGWCVGGDFFKFSEFGSETWFNLSIS 119

The following BLAST results are available for this feature:
BLAST of Csor.00g312300 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g312300 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6578525.11.60e-79100.00hypothetical protein SDJN03_22973, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g312300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g312300 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g312300.m01Csor.00g312300.m01mRNA