Csor.00g310200 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGATCTCTACGCTTTGGACTTCGATGGAGTTCTATGCGATAGCTGCGGAGAAAGCTCTCTTTCTGCTGTTAAGGTTCGCCTCTCTCTCACTTTTCCTTTTTGGTTCCTCTCAAAATGAATGAAAATTTGACTGAAAATGTGTTGATAGGACTCTCTTATGCCAATCGGCAATTCTTCGTTCAATTCAGTGATGTGAGGTTCTGAGAAATTGATAGATTGGAGGTTTAGATGTATTCGGTTGCCTAATGTGTTTGTTTATTCTGCAATTGTGTTGATAGCACTCTCTTATGCCAATCGGCAATTCTTCGTTCAATTCAATGCTGTGAGGTTCCGAGCTATTGATAGATTGGAGGTTTAGATGTATTTGGTTGCCTAATGTCTTTGTTTATTCTGCAATTGGCTGGCGTTCGTTTGAATGTAGACTGAGGATCGAAGGGAGAACTTTGAATTGTTTTTTTTTTTTTTTTCTTCATAAGAGTAATTCATGAGTTGATTGGTTGTGCTTTGTGCTTCTGTTTGAATGTTATCAGGCTGCTAAGGTAAGATGGCCTGACTTGTTCAACGATGTGGATTCGAGCTTGGAGAATTGGATTGTGGATCAGATGTACACAGTGAGTCGTTATTGATCTTTAATTGTTTCAATCTGTATGTTTTTTGGGGGTTGTGGATGTTTTCTTAACCCATACGGTTGTGAATCTATCTATCATCGAAGTACATGACAAATTTTGTAGTGGGTTTATAGATATTCTGTAATTTAACGTTCTATTCAATTTTTTTTCCCATTGTTTCAGTGTTTTAAATATAGCTCAGTCAAATTTAAAGATTGAGAAACATAAAACTAGTAAAATATGTTCTTATGAAAAAGACATTCGAGAAAAAGAAGAAAAATGGCGATAACCGAGAGAAAATGAGGGGGCAGGAGTTTAAGCGACCTGTTGTATCTCAAGGACTTGGTGTTAATTAGTTGCAGGCAAAAGATATAAGGTTGTTCTGAAATAGCTTTATGCCTTCTAGATTTTTCAAAAAAGTTCCCTTGTTTTCTTATAGCCTGTATTCAATTCATAGATCAACCATCTTCTATAGTAATAGAAATTGCCTTTTCTTCTGAGAGTTAGGATTTGGAGTCATACTGGTTAGGAATCATGACCCTCCACAATGGTATGATATTTCTCATGGCTTTGTTTTTGGTTTCCCCAAAAGGCCTTATACCAATGGAGATGTATTTCTTATCTAAACAAATGATCAACCCATTAATTAGCCGATGTGGGACTCCTTTCCCAATAATCCTCCCCTCGAATGAAGTACACCATACAGTCTCCCCTGAGGCCTATTGATCCTCGAACAGCCTCCCCTTAATCGAGGCTTGACTCCTTCTCTAGAGCTCTCGAACAAAGTACACTCTTTATTCGACACTTGAGTCACTTTTAACTATACCTTCGAGACTCACAACTTCTTTGTTCGACATCTAAGGGTTCTATTGACACGGCTAAGTTAAGGGCATGGATTTGCTACCATGTTAAGAATCACGACCCTTCATAATGGTGTGATATTTTCTACTTTGAGCATAAGCTTGGATGACTTTGCTTTTGGTTTCCCCAAAGGGCCTCGTACCAATGGAGATGTATTCCTTACTTATAAACTAATGATCAACCCCTTAATTAGCTGATGTAGGAGGTATTCCTTACTTATAAACCAATGATCAACCCCTTAATTAGCTGATGTAGGACTCCTCTCCCTGCAATCCTCAACCATACTTTATATAGTTTGCTTCTTGTGTTTGGCTCTTTTTATTTGGTTGTTCTTTTAGTTTTGAACATCAAATTTTAATAAGGAAAAAAAAAAAAAAAAAAAAAAAAACAATTGCGCAATATCTTTAATATTTAAAATCATTCAGCCATAGGTCTTCTAAAAGAAATTAAGACAAAAAATAGAGAACTGCCGTGAAATAACTCCAAGCTTTTGTTCCAATCTATCCCCCACTTTATAACCCTTCATAATTATACAAAGAAACTGGTAATCTTTCTGGGGCATTTTTATAGTATTAAAGAGGGAAAAGCCTCAGAAATTTCATTAGCAGACTAAGTTTTCAATAAAAATACTGTTAATATAACTAATGCCTGTAATGTGGTAGGTCCGCCCTGTGGTTGAAACTGGATATGAGAATTTGTTGCTGGTGAGGTTGCTGTTGGAGATGAGATTGCCTTCAATTAGGAAGTCTTCGGTGGGTATTTGCCCACAGTTTTGCTTCAGTTTATAATATCAGTTCTATTGACATGCTTAGGAAATTTTGCGGACATTACATTTTATTTTTTCAATTAGAAAGGTTGCAGAAGGGCTCCTAGTTCAAGGAATATTGGAGAATTGGTCAAACCTCAAACCAGTCATCATGGAAGAATGGGGAGAGAATAGAGATGCTCTCATAGACCTTTTTGGAAAGGTTAGAGATCAATGGATGGATGAGGACTTAACAACTTGGATCGGTGCAAATAGGTACTTTGGACAATCTTTTCAAATGAAACAGATATCCTGTTTCAAACTAATGATGGATAAAGCCACCATGGGAATTTGAGTACTTTTTGGTAGCTTTCGTTTCTTTTGTTTGAGCTACAATATCTTTGTTGTCCAATTGACCTTCTCTATTTAGTAAGAAGATAGCGAGAAGATAGGCGGTTGGAAAGGGGAACTAAGCATTCCTTATAATGGTGTGGAAACCTCTCCTAATAGACGCGTTTTAAAATCCGTGAGACTGACGGTGATATGTAATGAGCCAAAGCGGACAACATCTGCTAGCGGTGGGCTTGGACTGTTACAAATGGTACCAAAGCCAGACACCAAGCAATGTGCCAGCGAAGACGCTAAGCCCCCAAGAGGGGTGGATTCTGAGATCCCATATCGGTTGGAAATGGGAACTCATCATTCCTTATAACTGTGTGGAAACCTCTCTCTAATAGACACGTTTTAAAACCGTGAGGCTAACGGCAATATGTAACGGGCCAAAACAGACAATATCTGCTAGCAGTGGGTTTGGGCCGTGAATCTTTAAGCATTTAAAATTAACAAAAAAAAAAAAAAAAAATTAAGCTGACACCATGGGAGAGACAACTATGAAAACGTTTGAGGCTTTAACTATGGAGAAATGTATCTGTTATTCATCAAGAGGATGATACATTAGTCTAGCTACTTTTTTAAAAAAAATCGATTGTTACTTGTTTAACATTATTGTAGAATAACTTCAGGCTTATCCAGATGGGATAGTCCAAAAGCTCAACTCTTATTTAATGAAATCATGTTCTTTTTAGTCCCGAATGACATTTAATATATCCGACACTGATGTTGGCATTCACTCTTGGTCAAAACTGGCATATTGTGAATCATCATATACAAATCACTTCTACTTTTAGATTTGGAAGGCTATTGCATCTACATAACGTTGTGTACAGATTTTATCCAGGTGTTTCTGATGCTCTGAAGTTTGCAAGCTCAAGGATATACATAGTTACCACAAAGCAGGTTGGATCCACACTTGACACTTACTAAACTCTCTAACACCATGTATCTTTCCTTGGAGTTATGCATCTTCTCACATATCTCATATGCTTCTCTTCTCTTTTTTTGGCGCAGGGTCGATTTGCCGATGCTCTACTACGAGAACTTGCAGGAGTGGCCATACCTCCCGAAAGAATATATGGTCTAGGAACAGGGTTAGTATATTCCTCTAGCATAATTGCCAGCAGGGTTGTTTCCAAATTTGCTACAACATCATGGTTCAACACAAATATTCTGGAATTTTACCAAATAACTTTATTAAATGTATAATTAGGCTCCACTCATGCAAATTGATATTTTTTTTCATGTTGAACCACAGTGGACTATTTCATTCTTACTAATTAGAATAAATAGAGTCATTAACGAGAAAATGGTTTGTATGAGTGCAAAATTAACTACAAAAAGACTTGATATAACTCTATATAACTCTGCTTACGGAGAGTTATCAATAATCTTCACTAGCTCTTTGGATTTGTTTGACATATCATGAAAATATTTTCCCTCATTTCTTCTTAACTAACATTATTGATTCCTTTCAGTCCGAAAGTAGAAGTTTTAAAGCTGCTTCAAAAGATGCCTGAGCACCAAGGATTGAAGCTGCAGTAAGATATCTCTCATATTTTCACTCATCAATATAAGCATTGCCTGTTATAAGTGCCATTATACATGTTTTGTTCCTTCTTTTCTCTTCTCTCCCTTCAAAAGAGAGAAAACTAAGAATGTATGTGCTTTAAATGTGGCCAGCTTTGTGGAAGATCGATTGGCCACTCTAAAGAATGTCATCAAAGAGCCAGAATTAGATGCGTGGAATATATATCTGGGTACTCCTCCACTCTCCCTCTTTCAGTCTTTTCTCGAACATAATGATACTTTCATATTATCCTTTGACGTCCTAAAGTCCTTTTGAGAGAAAAGTTATAGATGAAGGGTAAGAATCCACAAAGCAGGAACAAAGGATTCACATCGATCGGATAAGGGAACGAGTGCCAGCAAGGATGCTGGGCCTCGAAGGGGGGTGGTTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAAACCTTGAGGGGAAACCTGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGTAGTGGACTTGGGTCGTTACAGTTATAGATGAAGAAGGTAAGAATCCACTAAGCAAACGCATAACCAAGAATAAAGGATTCACATCGATTAGATAAGGGAACGAGTGCCAACAAGGACACTGGCCCCAAATGGGGGTGGATAGATCCCACATCGGTTGGAGAGGAGAACAAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAATGCATTTTAAAAACTTTGAGGGGAAGTCCGAAAGAGGACATATCTGCTAGCGGTGGGCTTGAGTTGTTACAGTTATAGACGAAGGGTAAGAATCTACTAAGGAGATGCATAACAAGGAACAAAGGATTCACAATTGCCCCTTCAATTTATCTAAGCTTTGATATCTTAATTTTCTAAGCTTTGGCTCTGTTGCTAATGGCTGCATATGGGCGTTCATTTGATGAGCATTAATCTTGTCTTACTGCTAATAGTGGACTGGGGATATAACACACAGAAAGAGAGAGAGGAAGCAGCAGCGATTCAAAGGATTCAACTTCTTCAGCTATCTGACTTCAGTACGAAGCTCAAGTAA ATGGGGGATCTCTACGCTTTGGACTTCGATGGAGTTCTATGCGATAGCTGCGGAGAAAGCTCTCTTTCTGCTGTTAAGGCTGCTAAGGTAAGATGGCCTGACTTGTTCAACGATGTGGATTCGAGCTTGGAGAATTGGATTGTGGATCAGATGTACACAGTCCGCCCTGTGGTTGAAACTGGATATGAGAATTTGTTGCTGGTGAGGTTGCTGTTGGAGATGAGATTGCCTTCAATTAGGAAGTCTTCGGTTGCAGAAGGGCTCCTAGTTCAAGGAATATTGGAGAATTGGTCAAACCTCAAACCAGTCATCATGGAAGAATGGGGAGAGAATAGAGATGCTCTCATAGACCTTTTTGGAAAGGTTAGAGATCAATGGATGGATGAGGACTTAACAACTTGGATCGGTGCAAATAGATTTTATCCAGGTGTTTCTGATGCTCTGAAGTTTGCAAGCTCAAGGATATACATAGTTACCACAAAGCAGGGTCGATTTGCCGATGCTCTACTACGAGAACTTGCAGGAGTGGCCATACCTCCCGAAAGAATATATGGTCTAGGAACAGGTCCGAAAGTAGAAGTTTTAAAGCTGCTTCAAAAGATGCCTGAGCACCAAGGATTGAAGCTGCACTTTGTGGAAGATCGATTGGCCACTCTAAAGAATGTCATCAAAGAGCCAGAATTAGATGCGTGGAATATATATCTGGTGGACTGGGGATATAACACACAGAAAGAGAGAGAGGAAGCAGCAGCGATTCAAAGGATTCAACTTCTTCAGCTATCTGACTTCAGTACGAAGCTCAAGTAA ATGGGGGATCTCTACGCTTTGGACTTCGATGGAGTTCTATGCGATAGCTGCGGAGAAAGCTCTCTTTCTGCTGTTAAGGCTGCTAAGGTAAGATGGCCTGACTTGTTCAACGATGTGGATTCGAGCTTGGAGAATTGGATTGTGGATCAGATGTACACAGTCCGCCCTGTGGTTGAAACTGGATATGAGAATTTGTTGCTGGTGAGGTTGCTGTTGGAGATGAGATTGCCTTCAATTAGGAAGTCTTCGGTTGCAGAAGGGCTCCTAGTTCAAGGAATATTGGAGAATTGGTCAAACCTCAAACCAGTCATCATGGAAGAATGGGGAGAGAATAGAGATGCTCTCATAGACCTTTTTGGAAAGGTTAGAGATCAATGGATGGATGAGGACTTAACAACTTGGATCGGTGCAAATAGATTTTATCCAGGTGTTTCTGATGCTCTGAAGTTTGCAAGCTCAAGGATATACATAGTTACCACAAAGCAGGGTCGATTTGCCGATGCTCTACTACGAGAACTTGCAGGAGTGGCCATACCTCCCGAAAGAATATATGGTCTAGGAACAGGTCCGAAAGTAGAAGTTTTAAAGCTGCTTCAAAAGATGCCTGAGCACCAAGGATTGAAGCTGCACTTTGTGGAAGATCGATTGGCCACTCTAAAGAATGTCATCAAAGAGCCAGAATTAGATGCGTGGAATATATATCTGGTGGACTGGGGATATAACACACAGAAAGAGAGAGAGGAAGCAGCAGCGATTCAAAGGATTCAACTTCTTCAGCTATCTGACTTCAGTACGAAGCTCAAGTAA MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFNDVDSSLENWIVDQMYTVRPVVETGYENLLLVRLLLEMRLPSIRKSSVAEGLLVQGILENWSNLKPVIMEEWGENRDALIDLFGKVRDQWMDEDLTTWIGANRFYPGVSDALKFASSRIYIVTTKQGRFADALLRELAGVAIPPERIYGLGTGPKVEVLKLLQKMPEHQGLKLHFVEDRLATLKNVIKEPELDAWNIYLVDWGYNTQKEREEAAAIQRIQLLQLSDFSTKLK Homology
BLAST of Csor.00g310200 vs. NCBI nr
Match: XP_022959351.1 (uncharacterized protein LOC111460350 isoform X1 [Cucurbita moschata] >KAG6575181.1 hypothetical protein SDJN03_25820, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013746.1 hypothetical protein SDJN02_23913 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 539 bits (1388), Expect = 3.14e-193 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of Csor.00g310200 vs. NCBI nr
Match: XP_023006636.1 (uncharacterized protein LOC111499303 isoform X1 [Cucurbita maxima] >XP_023547657.1 uncharacterized protein LOC111806534 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 536 bits (1382), Expect = 2.58e-192 Identity = 266/268 (99.25%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of Csor.00g310200 vs. NCBI nr
Match: XP_008458208.1 (PREDICTED: uncharacterized protein LOC103497707 [Cucumis melo] >TYK03021.1 Ribosomal RNA small subunit methyltransferase G [Cucumis melo var. makuwa]) HSP 1 Score: 514 bits (1325), Expect = 1.31e-183 Identity = 257/269 (95.54%), Postives = 261/269 (97.03%), Query Frame = 0
BLAST of Csor.00g310200 vs. NCBI nr
Match: XP_004138497.1 (uncharacterized protein LOC101221288 isoform X2 [Cucumis sativus] >KGN45668.1 hypothetical protein Csa_004919 [Cucumis sativus]) HSP 1 Score: 513 bits (1321), Expect = 5.15e-183 Identity = 254/268 (94.78%), Postives = 260/268 (97.01%), Query Frame = 0
BLAST of Csor.00g310200 vs. NCBI nr
Match: XP_038875625.1 (uncharacterized protein LOC120068027 [Benincasa hispida]) HSP 1 Score: 512 bits (1319), Expect = 4.33e-182 Identity = 253/268 (94.40%), Postives = 260/268 (97.01%), Query Frame = 0
BLAST of Csor.00g310200 vs. ExPASy TrEMBL
Match: A0A6J1H4M1 (uncharacterized protein LOC111460350 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460350 PE=4 SV=1) HSP 1 Score: 539 bits (1388), Expect = 1.52e-193 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of Csor.00g310200 vs. ExPASy TrEMBL
Match: A0A6J1KYA6 (uncharacterized protein LOC111499303 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499303 PE=4 SV=1) HSP 1 Score: 536 bits (1382), Expect = 1.25e-192 Identity = 266/268 (99.25%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of Csor.00g310200 vs. ExPASy TrEMBL
Match: A0A5D3BTH5 (Ribosomal RNA small subunit methyltransferase G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001160 PE=4 SV=1) HSP 1 Score: 514 bits (1325), Expect = 6.35e-184 Identity = 257/269 (95.54%), Postives = 261/269 (97.03%), Query Frame = 0
BLAST of Csor.00g310200 vs. ExPASy TrEMBL
Match: A0A1S3C7X7 (uncharacterized protein LOC103497707 OS=Cucumis melo OX=3656 GN=LOC103497707 PE=4 SV=1) HSP 1 Score: 514 bits (1325), Expect = 6.35e-184 Identity = 257/269 (95.54%), Postives = 261/269 (97.03%), Query Frame = 0
BLAST of Csor.00g310200 vs. ExPASy TrEMBL
Match: A0A0A0K857 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004590 PE=4 SV=1) HSP 1 Score: 513 bits (1321), Expect = 2.49e-183 Identity = 254/268 (94.78%), Postives = 260/268 (97.01%), Query Frame = 0
BLAST of Csor.00g310200 vs. TAIR 10
Match: AT2G45990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 312 Blast hits to 312 proteins in 90 species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). ) HSP 1 Score: 461.1 bits (1185), Expect = 6.2e-130 Identity = 222/268 (82.84%), Postives = 243/268 (90.67%), Query Frame = 0
BLAST of Csor.00g310200 vs. TAIR 10
Match: AT2G45990.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 312 Blast hits to 312 proteins in 90 species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). ) HSP 1 Score: 461.1 bits (1185), Expect = 6.2e-130 Identity = 222/268 (82.84%), Postives = 243/268 (90.67%), Query Frame = 0
BLAST of Csor.00g310200 vs. TAIR 10
Match: AT2G45990.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 441.8 bits (1135), Expect = 3.9e-124 Identity = 216/268 (80.60%), Postives = 238/268 (88.81%), Query Frame = 0
BLAST of Csor.00g310200 vs. TAIR 10
Match: AT2G45990.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 367.5 bits (942), Expect = 9.3e-102 Identity = 177/209 (84.69%), Postives = 192/209 (91.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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