Csor.00g309600 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g309600
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ubiquitin-conjugating enzyme E2
Location	Csor_Chr01: 6451385 .. 6452153 (+)
RNA-Seq Expression	Csor.00g309600
Synteny	Csor.00g309600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAGACGCATTGCCAAAGAGTTGAAAGACCTCCAAAAGGATCCTCCAGTTTCTTGCAGTGCTGGTTTGTTCTGACCATTCTTCTGTATTTTCAATGCGAACCCATTTGTGAACTGTTGCGATATTGAATCATTTGTAATGCTAATCCATATATGGATCATATCTCTACCTCTGCTTGTACTTAGTTTGGGTCAGCTTTGTGGATTAATGGCATGCCCTTGATGATTATTTACAGGGCCTGTTGGTCAAGACATGTTTCATTGGCAGGCAACAATTATGGGTCCAGCTGATAGCCCTTATGCTGTAGGTGTATTTTCAGTCAACATTCACTTTCCTCCAGACTATCCCTTTAAACCACCAAAGGTATCATATTCATTAATGAATTCCTTGTAATTGTAATGGTAATGAGAATTATATTGTGTGTTTGAGTAGGTTTCTTTTAAGACCAAAGTTTATCATCCGAACATCAATAACAATGGAAGTATCTGCCTCGACATTTTGAAAGAGCAATGGAGCCCTGCTCTTACGGTTTCTAAGGTAATGCCATCTTTGGTTTAATACCAATCTTGTGTCTAATACCATGGAAGTGTAATGATTTGTTAGGGGATGAATTGTGTAGGTACTGCTGTCTGTTTGCTCACTGCTTACCGACCCGAACCCAGACGATCCGTTGGTGCCTGAGATAGCTCATATGTACAAGAACGACCGAGCCAAGTATGAAAGTAACGCTCGATCTTGGACCCAGAAGTATGCTATGGGGTAA

mRNA sequence

ATGGCTTCCAGACGCATTGCCAAAGAGTTGAAAGACCTCCAAAAGGATCCTCCAGTTTCTTGCAGTGCTGGGCCTGTTGGTCAAGACATGTTTCATTGGCAGGCAACAATTATGGGTCCAGCTGATAGCCCTTATGCTGTAGGTGTATTTTCAGTCAACATTCACTTTCCTCCAGACTATCCCTTTAAACCACCAAAGGTTTCTTTTAAGACCAAAGTTTATCATCCGAACATCAATAACAATGGAAGTATCTGCCTCGACATTTTGAAAGAGCAATGGAGCCCTGCTCTTACGGTTTCTAAGGTACTGCTGTCTGTTTGCTCACTGCTTACCGACCCGAACCCAGACGATCCGTTGGTGCCTGAGATAGCTCATATGTACAAGAACGACCGAGCCAAGTATGAAAGTAACGCTCGATCTTGGACCCAGAAGTATGCTATGGGGTAA

Coding sequence (CDS)

ATGGCTTCCAGACGCATTGCCAAAGAGTTGAAAGACCTCCAAAAGGATCCTCCAGTTTCTTGCAGTGCTGGGCCTGTTGGTCAAGACATGTTTCATTGGCAGGCAACAATTATGGGTCCAGCTGATAGCCCTTATGCTGTAGGTGTATTTTCAGTCAACATTCACTTTCCTCCAGACTATCCCTTTAAACCACCAAAGGTTTCTTTTAAGACCAAAGTTTATCATCCGAACATCAATAACAATGGAAGTATCTGCCTCGACATTTTGAAAGAGCAATGGAGCCCTGCTCTTACGGTTTCTAAGGTACTGCTGTCTGTTTGCTCACTGCTTACCGACCCGAACCCAGACGATCCGTTGGTGCCTGAGATAGCTCATATGTACAAGAACGACCGAGCCAAGTATGAAAGTAACGCTCGATCTTGGACCCAGAAGTATGCTATGGGGTAA

Protein sequence

MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDYPFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLVPEIAHMYKNDRAKYESNARSWTQKYAMG

Homology

[Close]

BLAST of Csor.00g309600 vs. ExPASy Swiss-Prot
Match: P35134 (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana OX=3702 GN=UBC11 PE=1 SV=2)

HSP 1 Score: 285.0 bits (728), Expect = 4.7e-76
Identity = 131/148 (88.51%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RI KELKDLQKDPP +CSAGPV +DMFHWQATIMGP +SPYA GVF V+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNIN+NGSICLDILKEQWSPALT+SKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 149
           PEIAHMYK DR+KYES ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 4.7e-76
Identity = 130/148 (87.84%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RI KELKDLQKDPP SCSAGPV +DMFHWQATIMGP DSPYA GVF V+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKV+F+TKV+HPNIN+NGSICLDILKEQWSPALT+SKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 149
           PEIAHMYK DRAKYE+ ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 6.2e-76
Identity = 129/148 (87.16%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RI KELKDLQKDPP SCSAGPV +DMFHWQATIMGP+DSPY+ GVF V IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKV+F+TKV+HPN+N+NGSICLDILKEQWSPALT+SKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 149
           PEIAHMYK DRAKYES ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 8.1e-76
Identity = 130/148 (87.84%), Postives = 139/148 (93.92%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RI KELKDLQKDPP SCSAGPV +DMFHWQAT+MGP+DSPYA GVF V IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKV+ KTKV+HPNIN+NGSICLDILKEQWSPALT+SKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 149
           PEIAHMYK DRAKYES ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.1e-75
Identity = 128/148 (86.49%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RI KELKDLQKDPP SCSAGPV +DMFHWQATIMGPA+SPY+ GVF V IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKV+F+TKV+HPNIN+NGSICLDILKEQWSPALT+SKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 149
           PEIAHMYK DRAKYE+ AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. NCBI nr
Match: KAG6607588.1 (hypothetical protein SDJN03_00930, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312 bits (800), Expect = 1.46e-107
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY
Sbjct: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148
           PEIAHMYKNDRAKYESNARSWTQKYAMG
Sbjct: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. NCBI nr
Match: XP_022932110.1 (ubiquitin-conjugating enzyme E2 5B-like [Cucurbita moschata] >XP_022932111.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita moschata] >XP_022932112.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita moschata] >XP_022972925.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita maxima] >XP_022972926.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita maxima] >XP_023521944.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita pepo subsp. pepo] >XP_023521948.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310 bits (793), Expect = 1.70e-106
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYA GVFSVNIHFPPDY
Sbjct: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAGGVFSVNIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148
           PEIAHMYKNDRAKYESNARSWTQKYAMG
Sbjct: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. NCBI nr
Match: XP_038898846.1 (ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida] >XP_038898847.1 ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida] >XP_038898848.1 ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida])

HSP 1 Score: 305 bits (781), Expect = 1.15e-104
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RIAKELKDLQKDPPVSCSAGPVGQ+MFHWQATIMGPADSPYA G+FSVNIHFPPDY
Sbjct: 1   MASKRIAKELKDLQKDPPVSCSAGPVGQNMFHWQATIMGPADSPYAGGLFSVNIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148
           PEIAHMYKNDRAKYESNARSWTQKYAMG
Sbjct: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. NCBI nr
Match: XP_038898845.1 (ubiquitin-conjugating enzyme E2 5B-like isoform X1 [Benincasa hispida])

HSP 1 Score: 305 bits (781), Expect = 2.47e-104
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RIAKELKDLQKDPPVSCSAGPVGQ+MFHWQATIMGPADSPYA G+FSVNIHFPPDY
Sbjct: 23  MASKRIAKELKDLQKDPPVSCSAGPVGQNMFHWQATIMGPADSPYAGGLFSVNIHFPPDY 82

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLS+CSLLTDPNPDDPLV
Sbjct: 83  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 142

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148
           PEIAHMYKNDRAKYESNARSWTQKYAMG
Sbjct: 143 PEIAHMYKNDRAKYESNARSWTQKYAMG 170

[Close]

BLAST of Csor.00g309600 vs. NCBI nr
Match: XP_022131792.1 (ubiquitin-conjugating enzyme E2-17 kDa-like [Momordica charantia] >XP_022131794.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Momordica charantia])

HSP 1 Score: 301 bits (771), Expect = 3.87e-103
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RIAKELKDLQKDPPVSCSAGPVGQDMFHW ATI+GPADSPYA GVFSVNIHFPPDY
Sbjct: 1   MASKRIAKELKDLQKDPPVSCSAGPVGQDMFHWNATIIGPADSPYAGGVFSVNIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAM 147
           PEIAHMYKNDRAKYE+NARSWTQKYAM
Sbjct: 121 PEIAHMYKNDRAKYENNARSWTQKYAM 147

[Close]

BLAST of Csor.00g309600 vs. ExPASy TrEMBL
Match: A0A6J1IA05 (ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita maxima OX=3661 GN=LOC111471432 PE=3 SV=1)

HSP 1 Score: 310 bits (793), Expect = 8.25e-107
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYA GVFSVNIHFPPDY
Sbjct: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAGGVFSVNIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148
           PEIAHMYKNDRAKYESNARSWTQKYAMG
Sbjct: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. ExPASy TrEMBL
Match: A0A6J1EVG1 (ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita moschata OX=3662 GN=LOC111438420 PE=3 SV=1)

HSP 1 Score: 310 bits (793), Expect = 8.25e-107
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYA GVFSVNIHFPPDY
Sbjct: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAGGVFSVNIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148
           PEIAHMYKNDRAKYESNARSWTQKYAMG
Sbjct: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. ExPASy TrEMBL
Match: A0A6J1BS08 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Momordica charantia OX=3673 GN=LOC111004866 PE=3 SV=1)

HSP 1 Score: 301 bits (771), Expect = 1.87e-103
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RIAKELKDLQKDPPVSCSAGPVGQDMFHW ATI+GPADSPYA GVFSVNIHFPPDY
Sbjct: 1   MASKRIAKELKDLQKDPPVSCSAGPVGQDMFHWNATIIGPADSPYAGGVFSVNIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAM 147
           PEIAHMYKNDRAKYE+NARSWTQKYAM
Sbjct: 121 PEIAHMYKNDRAKYENNARSWTQKYAM 147

[Close]

BLAST of Csor.00g309600 vs. ExPASy TrEMBL
Match: A0A6J1IKW1 (ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita maxima OX=3661 GN=LOC111477162 PE=3 SV=1)

HSP 1 Score: 300 bits (768), Expect = 5.37e-103
Identity = 139/148 (93.92%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RIAKEL+DLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPY+ G+FSVNIHFPPDY
Sbjct: 1   MASKRIAKELRDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYSGGIFSVNIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148
           PEIAHMYK DRAKYE NAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEHNARTWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. ExPASy TrEMBL
Match: A0A6J1EWM9 (ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita moschata OX=3662 GN=LOC111439039 PE=3 SV=1)

HSP 1 Score: 300 bits (768), Expect = 5.37e-103
Identity = 139/148 (93.92%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RIAKEL+DLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPY+ G+FSVNIHFPPDY
Sbjct: 1   MASKRIAKELRDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYSGGIFSVNIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 148
           PEIAHMYK DRAKYE NAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEHNARTWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 285.0 bits (728), Expect = 3.4e-77
Identity = 131/148 (88.51%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RI KELKDLQKDPP +CSAGPV +DMFHWQATIMGP +SPYA GVF V+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNIN+NGSICLDILKEQWSPALT+SKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 149
           PEIAHMYK DR+KYES ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 285.0 bits (728), Expect = 3.4e-77
Identity = 131/148 (88.51%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RI KELKDLQKDPP +CSAGPV +DMFHWQATIMGP +SPYA GVF V+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKVSFKTKVYHPNIN+NGSICLDILKEQWSPALT+SKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 149
           PEIAHMYK DR+KYES ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 284.6 bits (727), Expect = 4.4e-77
Identity = 129/148 (87.16%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RI KELKDLQKDPP SCSAGPV +DMFHWQATIMGP+DSPY+ GVF V IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKV+F+TKV+HPN+N+NGSICLDILKEQWSPALT+SKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 149
           PEIAHMYK DRAKYES ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 284.6 bits (727), Expect = 4.4e-77
Identity = 129/148 (87.16%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RI KELKDLQKDPP SCSAGPV +DMFHWQATIMGP+DSPY+ GVF V IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKV+F+TKV+HPN+N+NGSICLDILKEQWSPALT+SKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 149
           PEIAHMYK DRAKYES ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Csor.00g309600 vs. TAIR 10
Match: AT5G41700.2 (ubiquitin conjugating enzyme 8 )

HSP 1 Score: 282.3 bits (721), Expect = 2.2e-76
Identity = 128/148 (86.49%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAVGVFSVNIHFPPDY 60
           MAS+RI KELKDLQKDPP SCSAGPV +DMFHWQATIMGPA+SPY+ GVF V IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSVCSLLTDPNPDDPLV 120
           PFKPPKV+F+TKV+HPNIN+NGSICLDILKEQWSPALT+SKVLLS+CSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKNDRAKYESNARSWTQKYAMG 149
           PEIAHMYK DRAKYE+ AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

The following BLAST results are available for this feature:

BLAST of Csor.00g309600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35134	4.7e-76	88.51	Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana OX=3702 GN=UBC11 PE=1...	[more]
P35135	4.7e-76	87.84	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
Q94F47	6.2e-76	87.16	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
Q8S919	8.1e-76	87.84	Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=U...	[more]
P35131	3.1e-75	86.49	Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S...	[more]

BLAST of Csor.00g309600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607588.1	1.46e-107	100.00	hypothetical protein SDJN03_00930, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022932110.1	1.70e-106	99.32	ubiquitin-conjugating enzyme E2 5B-like [Cucurbita moschata] >XP_022932111.1 ubi...	[more]
XP_038898846.1	1.15e-104	96.62	ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida] >XP_03889...	[more]
XP_038898845.1	2.47e-104	96.62	ubiquitin-conjugating enzyme E2 5B-like isoform X1 [Benincasa hispida]	[more]
XP_022131792.1	3.87e-103	95.92	ubiquitin-conjugating enzyme E2-17 kDa-like [Momordica charantia] >XP_022131794....	[more]

BLAST of Csor.00g309600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IA05	8.25e-107	99.32	ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita maxima OX=3661 GN=LOC111471...	[more]
A0A6J1EVG1	8.25e-107	99.32	ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1BS08	1.87e-103	95.92	ubiquitin-conjugating enzyme E2-17 kDa-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1IKW1	5.37e-103	93.92	ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita maxima OX=3661 GN=LOC111477...	[more]
A0A6J1EWM9	5.37e-103	93.92	ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Csor.00g309600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08690.1	3.4e-77	88.51	ubiquitin-conjugating enzyme 11	[more]
AT3G08690.2	3.4e-77	88.51	ubiquitin-conjugating enzyme 11	[more]
AT1G64230.1	4.4e-77	87.16	ubiquitin-conjugating enzyme 28	[more]
AT1G64230.2	4.4e-77	87.16	ubiquitin-conjugating enzyme 28	[more]
AT5G41700.2	2.2e-76	86.49	ubiquitin conjugating enzyme 8	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..147 e-value: 8.8E-78 score: 274.4
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 3..145
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..145
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..148 e-value: 2.1E-73 score: 247.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 2..147
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 5..141 e-value: 1.5E-53 score: 180.2
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..147 score: 59.423153
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 3..142 e-value: 1.91686E-72 score: 211.677
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 74..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g309600.m01	Csor.00g309600.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity