Csor.00g304340 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g304340
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	thioredoxin H4-like
Location	Csor_Chr18: 12330367 .. 12330978 (+)
RNA-Seq Expression	Csor.00g304340
Synteny	Csor.00g304340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCAAGCTTTACAGTCCCACGTTCAAGATCTTCCAGTACATCATTAAAAGGAAAGGCTCCCACCATTGTCGAGTGCCACAACAAAGCTGAGTGGACAGCTCATTACGAAGCCACGAAGGAAACAAACAAGCTTGTAAATTTCATATGAACTTTCCATTCCAACATATAAATAATGCATGCTTCGGATTTGTCGTTGACAAGCAGGTGTTTTTTGCTTTGTGATTTGTTTGTGCTGCTGGTTTGTTGTAGATGGTGATTGATTTCACTGCTGCATGGTGTGCACCTTGTCGACACATGGAGCCGACTATCAAGGAGTTTGCTGCAAGGTTCAAGGATGTTGAGTTCATTAAAATCGACGTCGATACGTTGACGGTATGGTCGAGCTTTCAATCTTGTCTTGTCTTTGTGTTTGATATTGGTTGAGTGGGTATGTTGAAACATGACTGTGCTGAAAAAATGGATGACAACGCAGGATGTCGCTAAGGAATATGGCGTAGAGGCAATGCCAACATTCATACTGCTTAAGAACGGGAAAGTAGTTGATAAAGTGGTCGGAGCCAGGAGGGAGGACCTGCAAAAGAAGATTGAGAAATATAGTAAATATTGA

mRNA sequence

ATGGGAGCAAGCTTTACAGTCCCACGTTCAAGATCTTCCAGTACATCATTAAAAGGAAAGGCTCCCACCATTGTCGAGTGCCACAACAAAGCTGAGTGGACAGCTCATTACGAAGCCACGAAGGAAACAAACAAGCTTATGGTGATTGATTTCACTGCTGCATGGTGTGCACCTTGTCGACACATGGAGCCGACTATCAAGGAGTTTGCTGCAAGGTTCAAGGATGTTGAGTTCATTAAAATCGACGTCGATACGTTGACGGATGTCGCTAAGGAATATGGCGTAGAGGCAATGCCAACATTCATACTGCTTAAGAACGGGAAAGTAGTTGATAAAGTGGTCGGAGCCAGGAGGGAGGACCTGCAAAAGAAGATTGAGAAATATAGTAAATATTGA

Coding sequence (CDS)

ATGGGAGCAAGCTTTACAGTCCCACGTTCAAGATCTTCCAGTACATCATTAAAAGGAAAGGCTCCCACCATTGTCGAGTGCCACAACAAAGCTGAGTGGACAGCTCATTACGAAGCCACGAAGGAAACAAACAAGCTTATGGTGATTGATTTCACTGCTGCATGGTGTGCACCTTGTCGACACATGGAGCCGACTATCAAGGAGTTTGCTGCAAGGTTCAAGGATGTTGAGTTCATTAAAATCGACGTCGATACGTTGACGGATGTCGCTAAGGAATATGGCGTAGAGGCAATGCCAACATTCATACTGCTTAAGAACGGGAAAGTAGTTGATAAAGTGGTCGGAGCCAGGAGGGAGGACCTGCAAAAGAAGATTGAGAAATATAGTAAATATTGA

Protein sequence

MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKYSKY

Homology

[Close]

BLAST of Csor.00g304340 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-28
Identity = 57/128 (44.53%), Postives = 90/128 (70.31%), Query Frame = 0


Query: 2   GASFTVPRSRSSSTS--LKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPC 61
           GA  TV  S   +T+   + +   +++  + A W  H+   KE+NKL+V+DF+A+WC PC
Sbjct: 3   GALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPC 62

Query: 62  RHMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRE 121
           R +EP I   A +F DV+F+K+DVD L DVAKE+ V AMPTF+L+K GK +++++GA+++
Sbjct: 63  RMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKD 122

Query: 122 DLQKKIEK 128
           +L+KK+ K
Sbjct: 123 ELEKKVSK 130

[Close]

BLAST of Csor.00g304340 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 7.3e-28
Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARF-KDVEFIKID 83
           ++ CH    WT   +  KE+NKL+VIDFTA+WC PCR + P   + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKYS 130
           VD L  VAKE+GVEAMPTF+ +K G+VVDK+VGA +EDLQ KI K++
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of Csor.00g304340 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-27
Identity = 57/125 (45.60%), Postives = 87/125 (69.60%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MG +F+  + + ++   +G    +V  H+KA+W   ++A K T KL+VIDF+A+WC PC+
Sbjct: 1   MGGAFSTSKPKPAAGE-EGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCK 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
            MEP  KE A RF DV F+K+DVD L +VA+ + VEAMPTF+L + G+ V ++VGA +++
Sbjct: 61  MMEPVFKEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDE 120

Query: 121 LQKKI 126
           L+K I
Sbjct: 121 LEKTI 124

[Close]

BLAST of Csor.00g304340 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-27
Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVEFIKIDV 83
           ++ CHNK E+ A     KE  K+++IDFTA+WC PCR + P   E+A +F    F+K+DV
Sbjct: 8   VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67

Query: 84  DTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKY 129
           D L +VA++Y VEAMPTF+ +K+G   DKVVGAR++DLQ  I K+
Sbjct: 68  DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]

BLAST of Csor.00g304340 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-27
Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVEFIKIDV 83
           ++ CHNK E+ A     KE  K+++IDFTA+WC PCR + P   E+A +F    F+K+DV
Sbjct: 8   VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67

Query: 84  DTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKY 129
           D L +VA++Y VEAMPTF+ +K+G   DKVVGAR++DLQ  I K+
Sbjct: 68  DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]

BLAST of Csor.00g304340 vs. NCBI nr
Match: KAG6574117.1 (Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013177.1 Thioredoxin H2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264 bits (675), Expect = 4.75e-89
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR
Sbjct: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED
Sbjct: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120

Query: 121 LQKKIEKYSKY 131
           LQKKIEKYSKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of Csor.00g304340 vs. NCBI nr
Match: XP_022945457.1 (thioredoxin H4-like [Cucurbita moschata])

HSP 1 Score: 260 bits (665), Expect = 1.59e-87
Identity = 129/131 (98.47%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFT PRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR
Sbjct: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEPTIKEFAARFKDVEFIKIDVD LTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED
Sbjct: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120

Query: 121 LQKKIEKYSKY 131
           LQKKIEKYSKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of Csor.00g304340 vs. NCBI nr
Match: XP_023541691.1 (thioredoxin H4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260 bits (664), Expect = 2.26e-87
Identity = 129/131 (98.47%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR
Sbjct: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEPTIKEFAARFKDVEFIKIDVD L DVAKEYGVEAMPTFILLKNGKVVDKVVGARRED
Sbjct: 61  HMEPTIKEFAARFKDVEFIKIDVDKLADVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120

Query: 121 LQKKIEKYSKY 131
           LQKKIEKYSKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of Csor.00g304340 vs. NCBI nr
Match: XP_022968266.1 (thioredoxin H4-like [Cucurbita maxima])

HSP 1 Score: 249 bits (637), Expect = 2.97e-83
Identity = 125/131 (95.42%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFTVPRSRSSS SLKGKAP+IVEC NKAEWTAHYEATKETNKLMVIDFTAAWCAPCR
Sbjct: 1   MGASFTVPRSRSSSLSLKGKAPSIVECLNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEP IKEFAARFKDVEFIKIDVD L DVAKEYGVEAMPTFILLKNGKVVDKVVGARRED
Sbjct: 61  HMEPIIKEFAARFKDVEFIKIDVDKLADVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120

Query: 121 LQKKIEKYSKY 131
           LQKKIEKYSKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of Csor.00g304340 vs. NCBI nr
Match: XP_038892719.1 (thioredoxin H4-like [Benincasa hispida])

HSP 1 Score: 230 bits (587), Expect = 1.25e-75
Identity = 112/131 (85.50%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFTVPRS+SS+ +L+ K P IVEC NKA+WTA +EATKETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTVPRSKSSNATLQPKTPIIVECRNKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEP IKEFAARFKDVEF+KIDVD L DVA+EYGVEAMPTFIL+KNGKVVDKVVGARRED
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDVAQEYGVEAMPTFILIKNGKVVDKVVGARRED 120

Query: 121 LQKKIEKYSKY 131
           LQKKIEKYSKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of Csor.00g304340 vs. ExPASy TrEMBL
Match: A0A6J1G103 (thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111449688 PE=4 SV=1)

HSP 1 Score: 260 bits (665), Expect = 7.71e-88
Identity = 129/131 (98.47%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFT PRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR
Sbjct: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEPTIKEFAARFKDVEFIKIDVD LTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED
Sbjct: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120

Query: 121 LQKKIEKYSKY 131
           LQKKIEKYSKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of Csor.00g304340 vs. ExPASy TrEMBL
Match: A0A6J1HUE0 (thioredoxin H4-like OS=Cucurbita maxima OX=3661 GN=LOC111467554 PE=4 SV=1)

HSP 1 Score: 249 bits (637), Expect = 1.44e-83
Identity = 125/131 (95.42%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFTVPRSRSSS SLKGKAP+IVEC NKAEWTAHYEATKETNKLMVIDFTAAWCAPCR
Sbjct: 1   MGASFTVPRSRSSSLSLKGKAPSIVECLNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEP IKEFAARFKDVEFIKIDVD L DVAKEYGVEAMPTFILLKNGKVVDKVVGARRED
Sbjct: 61  HMEPIIKEFAARFKDVEFIKIDVDKLADVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120

Query: 121 LQKKIEKYSKY 131
           LQKKIEKYSKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of Csor.00g304340 vs. ExPASy TrEMBL
Match: A0A0A0KQG0 (Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_5G604150 PE=4 SV=1)

HSP 1 Score: 229 bits (585), Expect = 1.22e-75
Identity = 109/131 (83.21%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFTVPRS+SS+  ++ K PTI+ECH+KA+WTA +EATKETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEPTIKE AARFKDVEF+KIDVD L DVAKEYGVEAMPTFIL+KNGKV+DKVVGARR+D
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIEKYSKY 131
           LQKKIEK+SKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of Csor.00g304340 vs. ExPASy TrEMBL
Match: A0A6J1DAH1 (thioredoxin H4-like OS=Momordica charantia OX=3673 GN=LOC111019163 PE=4 SV=1)

HSP 1 Score: 228 bits (582), Expect = 7.05e-75
Identity = 108/131 (82.44%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFTVPRS+SS+ +L+ KAPTIVECH K +WTA +EA+KETNKL+VIDFTA WC PCR
Sbjct: 22  MGASFTVPRSKSSNATLQAKAPTIVECHTKPQWTARFEASKETNKLLVIDFTATWCGPCR 81

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEPTIKEFAARF DVEF+KIDVD LTDVA+EYGVEAMPTFIL+KNGKV+DKVVGAR+ED
Sbjct: 82  HMEPTIKEFAARFVDVEFVKIDVDELTDVAREYGVEAMPTFILIKNGKVIDKVVGARKED 141

Query: 121 LQKKIEKYSKY 131
           LQKKIEK+SKY
Sbjct: 142 LQKKIEKHSKY 152

[Close]

BLAST of Csor.00g304340 vs. ExPASy TrEMBL
Match: A0A6J1F7B2 (thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111442762 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 3.93e-72
Identity = 105/131 (80.15%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFT+PRS+SS+ +L+   PTIVECHNKAEWTA  EAT+ETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTIPRSKSSNATLQAMTPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
            MEPTIKEFA+RFKDVEF+KIDVD L DVAKEYGV+AMPTFIL+K GKVVDKVVGAR++D
Sbjct: 61  QMEPTIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120

Query: 121 LQKKIEKYSKY 131
           LQKKIE + KY
Sbjct: 121 LQKKIENHGKY 131

[Close]

BLAST of Csor.00g304340 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 127.5 bits (319), Expect = 8.0e-30
Identity = 57/128 (44.53%), Postives = 90/128 (70.31%), Query Frame = 0


Query: 2   GASFTVPRSRSSSTS--LKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPC 61
           GA  TV  S   +T+   + +   +++  + A W  H+   KE+NKL+V+DF+A+WC PC
Sbjct: 3   GALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPC 62

Query: 62  RHMEPTIKEFAARFKDVEFIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRE 121
           R +EP I   A +F DV+F+K+DVD L DVAKE+ V AMPTF+L+K GK +++++GA+++
Sbjct: 63  RMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKD 122

Query: 122 DLQKKIEK 128
           +L+KK+ K
Sbjct: 123 ELEKKVSK 130

[Close]

BLAST of Csor.00g304340 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 5.2e-29
Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARF-KDVEFIKID 83
           ++ CH    WT   +  KE+NKL+VIDFTA+WC PCR + P   + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKYS 130
           VD L  VAKE+GVEAMPTF+ +K G+VVDK+VGA +EDLQ KI K++
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of Csor.00g304340 vs. TAIR 10
Match: AT1G69880.1 (thioredoxin H-type 8 )

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-27
Identity = 51/113 (45.13%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 18  KGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVE 77
           K  +P IVE  N  +W +   A K+TNKL+VI+FTA WC PC+ +EP ++E AA++ DVE
Sbjct: 33  KVNSPCIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVE 92

Query: 78  FIKIDVDTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKYSK 131
           F+KIDVD L  V  E+ +  +P  + +K G+ VD VVG + ++L++K+ KY++
Sbjct: 93  FVKIDVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVDELERKLNKYTQ 145

[Close]

BLAST of Csor.00g304340 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25
Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVEFIKIDV 83
           ++ CH    W    +   E+ KL+VIDFTA+WC PCR + P   E A +F +V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 84  DTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKY 129
           D L  VA+E+ VEAMPTF+ +K G ++D+VVGA ++++ +K+ K+
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Csor.00g304340 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 112.1 bits (279), Expect = 3.5e-25
Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVEFIKIDV 83
           ++ CH   +WT   +A  E+ KL+VIDFTA WC PCR + P   + A +  DV F K+DV
Sbjct: 7   VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDV 66

Query: 84  DTLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKY 129
           D L  VA+E+ V+AMPTFI +K G++ + VVGA +E++   +EK+
Sbjct: 67  DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111

The following BLAST results are available for this feature:

BLAST of Csor.00g304340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38879	1.1e-28	44.53	Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2	[more]
Q39239	7.3e-28	53.27	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
Q6Z4I3	1.6e-27	45.60	Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 S...	[more]
Q0D840	2.8e-27	50.48	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]
A2YIW7	2.8e-27	50.48	Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1	[more]

BLAST of Csor.00g304340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574117.1	4.75e-89	100.00	Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013177.1 Th...	[more]
XP_022945457.1	1.59e-87	98.47	thioredoxin H4-like [Cucurbita moschata]	[more]
XP_023541691.1	2.26e-87	98.47	thioredoxin H4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968266.1	2.97e-83	95.42	thioredoxin H4-like [Cucurbita maxima]	[more]
XP_038892719.1	1.25e-75	85.50	thioredoxin H4-like [Benincasa hispida]	[more]

BLAST of Csor.00g304340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G103	7.71e-88	98.47	thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111449688 PE=4 SV=1	[more]
A0A6J1HUE0	1.44e-83	95.42	thioredoxin H4-like OS=Cucurbita maxima OX=3661 GN=LOC111467554 PE=4 SV=1	[more]
A0A0A0KQG0	1.22e-75	83.21	Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_5G604150 PE=4 SV=1	[more]
A0A6J1DAH1	7.05e-75	82.44	thioredoxin H4-like OS=Momordica charantia OX=3673 GN=LOC111019163 PE=4 SV=1	[more]
A0A6J1F7B2	3.93e-72	80.15	thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111442762 PE=4 SV=1	[more]

BLAST of Csor.00g304340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39950.1	8.0e-30	44.53	thioredoxin 2	[more]
AT1G19730.1	5.2e-29	53.27	Thioredoxin superfamily protein	[more]
AT1G69880.1	1.7e-27	45.13	thioredoxin H-type 8	[more]
AT1G45145.1	1.2e-25	45.71	thioredoxin H-type 5	[more]
AT5G42980.1	3.5e-25	45.71	thioredoxin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 55..64 score: 49.89 coord: 47..55 score: 43.64 coord: 94..105 score: 39.21
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 7..130 e-value: 1.3E-39 score: 136.9
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 16..128
None	No IPR available	PANTHER	PTHR10438:SF416	THIOREDOXIN H7	coord: 16..128
None	No IPR available	CDD	cd02947	TRX_family	coord: 35..126 e-value: 5.56944E-36 score: 116.889
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 36..126 e-value: 1.6E-28 score: 98.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..130 score: 14.765353
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 48..66
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 18..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g304340.m01	Csor.00g304340.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity