Homology
BLAST of Csor.00g303460 vs. ExPASy Swiss-Prot
Match:
Q8L6J5 (DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT1-TOM PE=2 SV=2)
HSP 1 Score: 1419.4 bits (3673), Expect = 0.0e+00
Identity = 701/901 (77.80%), Postives = 791/901 (87.79%), Query Frame = 0
Query: 462 GVLNHANGYATAAEAAI--SEEDLSGSEEIQELMEELSKQDKVESHFQQPK--KMVDGVG 521
G L Y +AAEA + SEED+ +EIQEL+EE+ K+++ QPK K + G+G
Sbjct: 106 GSLGRLRSYGSAAEAIVSTSEEDI---DEIQELIEEMDKENEALKANLQPKQPKTIGGMG 165
Query: 522 VGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAI 581
VGKYN LR+RQIK+ETEAWEEAA+EYQELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAI
Sbjct: 166 VGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI 225
Query: 582 AADQEFCKK-KSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGSSSVRVVQAACQIG 641
AA+Q+ C + K+R ++AP+FD LPA+MMAVITMHKLMGLLMT GG+ S RVVQAA IG
Sbjct: 226 AAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMT-GGGTGSARVVQAASYIG 285
Query: 642 EAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKKLAKEQDKLRKKVTNLMKKQKL 701
EAIEHE RIH+F E TKK + GD E D + KE+++LRKKV LMKKQKL
Sbjct: 286 EAIEHEARIHRFLEKTKKSNA----LSGDLEETPGD---MMKERERLRKKVKILMKKQKL 345
Query: 702 RQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGGPPDIRPAFVHTL 761
RQVR IVK+ D KPWGQD VKVGCRLIQ+L+ETAYIQPP DQL GPPDIRPAFVHTL
Sbjct: 346 RQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTL 405
Query: 762 KTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPLNWTGYDKGAHLFLP 821
KT+ E K SRRYGVI+CDPLVR+GL+KTARH+VIPYMPMLVPP +W GYDKG +LFLP
Sbjct: 406 KTV--ETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLP 465
Query: 822 SYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSIIDRIWASGGRLA 881
SY+MR HGAKQQREAVKRVPKKQLEPVF+ALDTLG TKWRVN++VL I+DRIWASGGRLA
Sbjct: 466 SYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLA 525
Query: 882 DLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIELKLAVARKMKEEE 941
DLVDRED PLPE P EDE EIRKWKWK+K KKEN ERHSQRCDIELKLAVARKMK+E+
Sbjct: 526 DLVDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDED 585
Query: 942 GFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRWLKIHLANLYAGG 1001
GFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFAEGRPLG SGLRWLKIHLAN+Y GG
Sbjct: 586 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGG 645
Query: 1002 VDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCINLSEALRSSSPE 1061
VDKLSY+ R++F+ENHL++IFDSA+RPLEG RWWLGAEDPFQCLA CIN++EALRS SPE
Sbjct: 646 VDKLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPE 705
Query: 1062 TTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRSDA 1121
T +S+MP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIM+ DA
Sbjct: 706 TAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDA 765
Query: 1122 EKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKRLKERASIADDSQ 1181
KDPA +PN + ARLLINQVDRKLVKQTVMTSVYGVTY+GARDQIKKRLKER I DD++
Sbjct: 766 AKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNE 825
Query: 1182 LFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTTPLGLPVVQPYRQ 1241
LFAA+CYAA+TTLTALGEMFEAARSIMSWLG+CAK+IA EN PVRWTTPLGLPVVQPYR+
Sbjct: 826 LFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRK 885
Query: 1242 LGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTAVACRRAGLNFAG 1301
LGRHLIKTSLQ+L LQRETDKVM RQ+TAFPPNFVHSLDGSHMMMTA+AC+ +GL+FAG
Sbjct: 886 LGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAG 945
Query: 1302 VHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSLKFPPLPDRGDFDLK 1358
VHDSYWTHACDVD MN++LREKFVELY+APILENLL++FQ+SFP L+FPPLP+RGDFDL+
Sbjct: 946 VHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLR 993
BLAST of Csor.00g303460 vs. ExPASy Swiss-Prot
Match:
Q93Y94 (DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT1 PE=2 SV=1)
HSP 1 Score: 1407.5 bits (3642), Expect = 0.0e+00
Identity = 694/901 (77.03%), Postives = 793/901 (88.01%), Query Frame = 0
Query: 462 GVLNHANGYATAAE--AAISEEDLSGSEEIQELMEELSKQDKVESHFQQPK--KMVDGVG 521
G L Y +AAE A+ SEED+ +EIQEL+EE++K+++ QPK K + G+G
Sbjct: 106 GSLGFLRSYGSAAEAIASTSEEDI---DEIQELIEEMNKENEALKTNLQPKQPKTIGGMG 165
Query: 522 VGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAI 581
VGKYN+LR+RQIK+ETEAWEEAA+EYQELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAI
Sbjct: 166 VGKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI 225
Query: 582 AADQEFCKK-KSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGSSSVRVVQAACQIG 641
AA+Q+ C + K+R ++AP+FD LPA+MMAVITMHKLMGLLMT GG+ S RVVQAA IG
Sbjct: 226 AAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMT-GGGTGSARVVQAASHIG 285
Query: 642 EAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKKLAKEQDKLRKKVTNLMKKQKL 701
EAIEHE RIH+F E TKK + GD E D + KE++++RKKV LMKKQKL
Sbjct: 286 EAIEHEARIHRFLEKTKKSNA----LSGDLEDTPGD---IMKERERVRKKVKILMKKQKL 345
Query: 702 RQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGGPPDIRPAFVHTL 761
+QVR IVK+ D KPWGQD VKVGCRLIQ+L+ETAYIQPP DQL PPDIRPAFVHTL
Sbjct: 346 QQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTL 405
Query: 762 KTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPLNWTGYDKGAHLFLP 821
KT+ E K SRRYGVI+CDPLVR+GL+KTARH+VIPYMPMLVPP +W GYDKGA+LFLP
Sbjct: 406 KTV--ETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLP 465
Query: 822 SYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSIIDRIWASGGRLA 881
SY+MR HGAKQQREAVKRVPKKQLEPVF+ALDTLG TKWR+N++VL I+DRIWASGGRLA
Sbjct: 466 SYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLA 525
Query: 882 DLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIELKLAVARKMKEEE 941
DLVDRED PLPEEP EDE +IRKWKWK+K KKEN ERHSQRCDIELKLAVARKMK+E+
Sbjct: 526 DLVDREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDED 585
Query: 942 GFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRWLKIHLANLYAGG 1001
GFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFAEGRPLG+SGLRWLKIHLAN+Y GG
Sbjct: 586 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGG 645
Query: 1002 VDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCINLSEALRSSSPE 1061
VDKLSY+ R++F+ENH+++IFDSA+RPLEG RWWLGAEDPFQCLA CIN++EALRS SPE
Sbjct: 646 VDKLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPE 705
Query: 1062 TTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRSDA 1121
T +S+MP+HQDGSCNGLQHYAALGRD LGAAAVNLVAGDKPADVYSGIAARVLDIM+ DA
Sbjct: 706 TAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDA 765
Query: 1122 EKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKRLKERASIADDSQ 1181
KDPA +PN + ARLLINQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER I DD++
Sbjct: 766 AKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNE 825
Query: 1182 LFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTTPLGLPVVQPYRQ 1241
LFAA+CYAA+TTLTALGEMFEAARSIMSWLG+CAK+IA EN PVRWTTPLGLPVVQPYR+
Sbjct: 826 LFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRK 885
Query: 1242 LGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTAVACRRAGLNFAG 1301
LGRHLIKTSLQ+L LQRETDKVM RQ+TAFPPNFVHSLDGSHMMMTA+AC+ +GL+FAG
Sbjct: 886 LGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAG 945
Query: 1302 VHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSLKFPPLPDRGDFDLK 1358
VHDSYWTHA DVD MN++LREKFVELY+APILENLL++FQ+SFP L+FPPLP+RGDFDL+
Sbjct: 946 VHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLR 993
BLAST of Csor.00g303460 vs. ExPASy Swiss-Prot
Match:
Q8VWF8 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT2 PE=2 SV=2)
HSP 1 Score: 1370.9 bits (3547), Expect = 0.0e+00
Identity = 688/1002 (68.66%), Postives = 818/1002 (81.64%), Query Frame = 0
Query: 379 NPYYQR--MWRNIVKRAASR----------RDTFLSRKVIEDSIFVEEIRSSRTLGSLKS 438
NPY+ MWRNI+K+ +SR T+ +DSIF + + R+L +
Sbjct: 27 NPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNRTYSFLGFGQDSIFKDNTK-FRSLIPISC 86
Query: 439 CCLLEGSRGISLFHSREVGFAKSNFAHSSDPVAFYGVLNH---ANGYATAAEAAI----- 498
++ G + + + + S P+ V N+ YA+ AEA
Sbjct: 87 SNIVMGFQNLGEYLPGD--------EFLSRPLIKNQVNNNFCCRKSYASVAEAVAVSSTD 146
Query: 499 SEEDLSGSEEIQELMEELSKQDKVESHFQQPKK--MVDGVGVGKYNILRKRQIKMETEAW 558
+EED+S +E+ EL+ EL K++K + F++ K+ + G+G KY L++RQ+K+ETEAW
Sbjct: 147 AEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAW 206
Query: 559 EEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQEFCKK-KSRVSHAPY 618
E+AA+EY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IA +QE C + KS+ ++A Y
Sbjct: 207 EQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKY 266
Query: 619 FDLLPADMMAVITMHKLMGLLMTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKK 678
F LPADMMAVITMHKLMGLLMT G + RVVQAA IG+AIE EVRIH F E TKK+
Sbjct: 267 FYQLPADMMAVITMHKLMGLLMT-GGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQ 326
Query: 679 KSNEKTTEGDTEPVVEDQKKLAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQD 738
K+ + + ED + + +EQ+KLRKKVTNLMKKQKLR V IV+ D KPWGQD
Sbjct: 327 KAEKDKQK-------EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQD 386
Query: 739 AHVKVGCRLIQLLIETAYIQPPMDQLGGGPPDIRPAFVHTLKTITTEVQKTSRRYGVIEC 798
A KVG RLI LL++TAYIQPP +QL PPDIRPAFVH+++T+ E + SRRYG+I+C
Sbjct: 387 ARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQC 446
Query: 799 DPLVRRGLEKTARHIVIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRV 858
D LV +GLE+TARH+VIPYMPMLVPP+ WTGYDKG HL+LPSYVMR HGA+QQREAVKR
Sbjct: 447 DELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRA 506
Query: 859 PKKQLEPVFEALDTLGRTKWRVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDE 918
+ QL+PVFEALDTLG TKWR+NKRVLS++DRIWA GGRLADLVDR+DAPLPEEP EDE
Sbjct: 507 SRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDE 566
Query: 919 EEIRKWKWKLKAAKKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHP 978
KW+WK+K+ KKEN ERHSQRCDIELKLAVARKMK+EE F+YPHN+DFRGRAYPMHP
Sbjct: 567 ALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHP 626
Query: 979 HLNHLGSDMCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDE 1038
HLNHLGSD+CRG+LEFAEGRPLGESGLRWLKIHLANL+AGGV+KLS + R+ FTENH+D+
Sbjct: 627 HLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDD 686
Query: 1039 IFDSADRPLEGNRWWLGAEDPFQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQH 1098
IFDS+D+PLEG RWWL AEDPFQCLAVCINLSEA+RSSSPET++SH+PVHQDGSCNGLQH
Sbjct: 687 IFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQH 746
Query: 1099 YAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQ 1158
YAALGRDKLGAAAVNLVAG+KPADVYSGIAARVLDIM+ DA++DPA P+A+ AR+L+NQ
Sbjct: 747 YAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQ 806
Query: 1159 VDRKLVKQTVMTSVYGVTYMGARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEM 1218
VDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER +IADDS+LF A+CYAA+ TLTALGEM
Sbjct: 807 VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEM 866
Query: 1219 FEAARSIMSWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRET 1278
FEAARSIM+WLGECAK+IASEN+PVRWTTPLGLPVVQPYR++GRHLIKTSLQ+L LQRET
Sbjct: 867 FEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRET 926
Query: 1279 DKVMATRQKTAFPPNFVHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLL 1338
+KVM RQ+TAFPPNF+HSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVD +NR+L
Sbjct: 927 EKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRIL 986
Query: 1339 REKFVELYEAPILENLLKTFQKSFPSLKFPPLPDRGDFDLKD 1358
REKFVELYEAPILE LL++FQ S+P+L FPPLP+RGDFD++D
Sbjct: 987 REKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRD 1011
BLAST of Csor.00g303460 vs. ExPASy Swiss-Prot
Match:
Q8L6J3 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT2-TOM PE=2 SV=2)
HSP 1 Score: 1364.0 bits (3529), Expect = 0.0e+00
Identity = 678/987 (68.69%), Postives = 814/987 (82.47%), Query Frame = 0
Query: 385 MWRNIVKRAASR----------RDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSR 444
MWRNI+K+ +SR T+ +DS+F + + R+L + ++ G +
Sbjct: 35 MWRNIIKQLSSRTPQKLLFSSKNRTYSFLGFGQDSVFKDNTK-FRSLIPISCSNIVMGFQ 94
Query: 445 GISLFHSREVGFAKSNFAHSSDPVAFYGVLNHAN-GYATAAEAAISEEDLSGSEEIQELM 504
+ + + ++ + + F ++A+ A A + +EED+S +E+QEL+
Sbjct: 95 NLGEYLPGDEFLSRPLLKNQVNSNDFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVQELL 154
Query: 505 EELSKQDKVESHFQQPKK--MVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMC 564
EL K++K + F++ K+ + G+G KY L++RQ+K+ETEAWE+AA+EY+ELL DMC
Sbjct: 155 TELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMC 214
Query: 565 EQKLAPNLPYIKSLFLGWFEPLRDAIAADQEFCKK-KSRVSHAPYFDLLPADMMAVITMH 624
EQKLAPNLPY+KSLFLGWFEPLRD IA +QE C + KS+ ++A Y LPADMMAVITMH
Sbjct: 215 EQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMH 274
Query: 625 KLMGLLMTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVV 684
KLMGLLMT G + RVVQAA IG+AIE EVRIH F E TKK+K+ + +
Sbjct: 275 KLMGLLMT-GGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK------- 334
Query: 685 EDQKKLAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIE 744
ED + + +EQ+KLRKKVTNLMKKQKLR V IV+ D KPWGQDA KVG RLI+LL++
Sbjct: 335 EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQ 394
Query: 745 TAYIQPPMDQLGGGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHI 804
TAYIQPP +QL PPDIRPAF+H+++T+ E + SRRYG+I+CD LV +GLE+TARH+
Sbjct: 395 TAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHM 454
Query: 805 VIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTL 864
VIPYMPMLVPP+ WTGYDKG HL+LPSYVMR HGA+QQREAVKR + QL+PVFEALDTL
Sbjct: 455 VIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTL 514
Query: 865 GRTKWRVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKK 924
G TKWR+NKRVLS+IDRIWA GGRLADLVDR+DAPLPEEP EDE KW+WK+K+ KK
Sbjct: 515 GSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKK 574
Query: 925 ENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILE 984
EN ERHSQRCDIELKLAVARKMK+EEGF+YPHN+DFRGRAYPMHPHLNHLGSD+CRG+L
Sbjct: 575 ENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLV 634
Query: 985 FAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWW 1044
FAEGRPLGESGLRWLKIHLANL+AGGV+KLS + R++FTENH+D+IFDSAD+PLEG RWW
Sbjct: 635 FAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWW 694
Query: 1045 LGAEDPFQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVN 1104
L AEDPFQCLAVCINLSEA+RSSSPET++SH+PVHQDGSCNGLQHYAALGRD+LGAAAVN
Sbjct: 695 LNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVN 754
Query: 1105 LVAGDKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVY 1164
LVAG+KPADVYSGIAARVLDIM+ DA++DPA P+A+ AR L+NQVDRKLVKQTVMTSVY
Sbjct: 755 LVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVY 814
Query: 1165 GVTYMGARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECA 1224
GVTY+GARDQIK+RLKER +IADDS+LF A+CYAA+ TLTALGEMFEAARSIM+WLGECA
Sbjct: 815 GVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECA 874
Query: 1225 KVIASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPN 1284
K+IASEN+PVRWTTPLGLPVVQPYR++GRHLIKTSLQ+L LQ+ET+KVM RQ+TAFPPN
Sbjct: 875 KIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPN 934
Query: 1285 FVHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILEN 1344
F+HSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVD +NR+LREKFVELYE PILE
Sbjct: 935 FIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEK 994
Query: 1345 LLKTFQKSFPSLKFPPLPDRGDFDLKD 1358
LL++FQ S+P+L FPPLP+RGDFDL+D
Sbjct: 995 LLESFQTSYPTLLFPPLPERGDFDLRD 1012
BLAST of Csor.00g303460 vs. ExPASy Swiss-Prot
Match:
P92969 (DNA-directed RNA polymerase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPOT1 PE=2 SV=1)
HSP 1 Score: 1308.5 bits (3385), Expect = 0.0e+00
Identity = 652/981 (66.46%), Postives = 784/981 (79.92%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISLFHSREV 444
MWRNI+ RA+ R+ FLS + S +R G L S L G+S+ E+
Sbjct: 1 MWRNILGRASLRKVKFLS----DSSSSGTHYPVNRVRGILSSVNLSGVRNGLSINPVNEM 60
Query: 445 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAIS---EEDLSGSEEIQELMEELSKQ-- 504
G S+F H G GYATAA+A S E++ SGS+E+ EL+ E+ K+
Sbjct: 61 G-GLSSFRH--------GQCYVFEGYATAAQAIDSTDPEDESSGSDEVNELITEMEKETE 120
Query: 505 ---DKVESHFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLA 564
K PK+++ G+G K+ +L++RQ+KMETE WE AARE +E+L DMCEQKLA
Sbjct: 121 RIRKKARLAAIPPKRVIAGMGAQKFYMLKQRQVKMETEEWERAARECREILADMCEQKLA 180
Query: 565 PNLPYIKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGL 624
PNLPY+KSLFLGWFEP+R+AI D + K KK ++ +AP+ + LPAD MAVITMHK+MGL
Sbjct: 181 PNLPYMKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGL 240
Query: 625 LMTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKK 684
LMT++ G V++V AA QIGEA+E EVRI+ F + KK + +KT + E V E+
Sbjct: 241 LMTNAEGVGIVKLVNAATQIGEAVEQEVRINSFLQKKNKKNATDKTINTEAENVSEE--I 300
Query: 685 LAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQ 744
+AKE +K RK+VT LM+K KLRQV+ +V++HD KPWGQ+A VKVG RLIQLL+E AYIQ
Sbjct: 301 VAKETEKARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQ 360
Query: 745 PPMDQLGGGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYM 804
PP +Q GPPDIRPAF +T+T E KTSRRYG IECDPLV +GL+K+ARH+VIPY+
Sbjct: 361 PPAEQFDDGPPDIRPAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSARHMVIPYL 420
Query: 805 PMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKW 864
PML+PP NWTGYD+GAH FLPSYVMR HGAKQQR +KR PK+QLEPV+EALDTLG TKW
Sbjct: 421 PMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKW 480
Query: 865 RVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSER 924
++NK+VLS++DRIWA+GGR+ LVDRED P+PEEP ED+E+ + W+W+ K A K+N+ER
Sbjct: 481 KINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNER 540
Query: 925 HSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGR 984
HSQRCDIELKL VARKMK+EEGFYYPHN+DFRGRAYP+HP+LNHLGSD+CRGILEF EG+
Sbjct: 541 HSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGK 600
Query: 985 PLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAED 1044
PLG+SGLRWLKIH+ANLYAGGVDKL+Y+DR++FTE+HL++IFDS+DRPLEG RWWL AED
Sbjct: 601 PLGKSGLRWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAED 660
Query: 1045 PFQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGD 1104
PFQCLA CINLSEALRS PE +SH+P+HQDGSCNGLQHYAALGRDKLGA AVNLV G+
Sbjct: 661 PFQCLAACINLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGE 720
Query: 1105 KPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYM 1164
KPADVY+ IAARVL IM+ DAE+DP T PNA +A+L+++QVDRKLVKQTVMTSVYGVTY
Sbjct: 721 KPADVYTEIAARVLKIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYS 780
Query: 1165 GARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIAS 1224
GARDQIKKRLKER + DDS F ASCYAA+ TL AL EMFEAAR+I SW G+CAK+IAS
Sbjct: 781 GARDQIKKRLKERGTFEDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIAS 840
Query: 1225 ENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSL 1284
EN V WTTPLGLPVVQPYR+ GRHL+KT+LQVL L RETDKVMA RQ TAF PNF+HSL
Sbjct: 841 ENNAVCWTTPLGLPVVQPYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSL 900
Query: 1285 DGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTF 1344
DGSHMMMTAVAC RAGL+FAGVHDS+WTHACDVDVMN +LREKFVELYE PILENLL++F
Sbjct: 901 DGSHMMMTAVACNRAGLSFAGVHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESF 960
Query: 1345 QKSFPSLKFPPLPDRGDFDLK 1357
QKSFP + FPPLP+RGDFDL+
Sbjct: 961 QKSFPDISFPPLPERGDFDLR 966
BLAST of Csor.00g303460 vs. NCBI nr
Match:
KAG6574029.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 2773 bits (7187), Expect = 0.0
Identity = 1417/1417 (100.00%), Postives = 1417/1417 (100.00%), Query Frame = 0
Query: 1 MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ
Sbjct: 1 MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
Query: 61 ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF
Sbjct: 61 ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240
YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL
Sbjct: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240
Query: 241 STDQDLDTFLLGDLEDSDGGGADEGDESFDDDFDKIENSDVEEENPKAKKRRRCRNQAPS 300
STDQDLDTFLLGDLEDSDGGGADEGDESFDDDFDKIENSDVEEENPKAKKRRRCRNQAPS
Sbjct: 241 STDQDLDTFLLGDLEDSDGGGADEGDESFDDDFDKIENSDVEEENPKAKKRRRCRNQAPS 300
Query: 301 ESPPATKKFPFTRSVHHIPLDVDTDDIDLVDYLVEKISILKLSWPRQSDSAATSLLQGDK 360
ESPPATKKFPFTRSVHHIPLDVDTDDIDLVDYLVEKISILKLSWPRQSDSAATSLLQGDK
Sbjct: 301 ESPPATKKFPFTRSVHHIPLDVDTDDIDLVDYLVEKISILKLSWPRQSDSAATSLLQGDK 360
Query: 361 TNSLLRFELLELVVVGIRNPYYQRMWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRT 420
TNSLLRFELLELVVVGIRNPYYQRMWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRT
Sbjct: 361 TNSLLRFELLELVVVGIRNPYYQRMWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRT 420
Query: 421 LGSLKSCCLLEGSRGISLFHSREVGFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISE 480
LGSLKSCCLLEGSRGISLFHSREVGFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISE
Sbjct: 421 LGSLKSCCLLEGSRGISLFHSREVGFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISE 480
Query: 481 EDLSGSEEIQELMEELSKQDKVESHFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAA 540
EDLSGSEEIQELMEELSKQDKVESHFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAA
Sbjct: 481 EDLSGSEEIQELMEELSKQDKVESHFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAA 540
Query: 541 REYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLP 600
REYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLP
Sbjct: 541 REYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLP 600
Query: 601 ADMMAVITMHKLMGLLMTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEK 660
ADMMAVITMHKLMGLLMTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEK
Sbjct: 601 ADMMAVITMHKLMGLLMTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEK 660
Query: 661 TTEGDTEPVVEDQKKLAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKV 720
TTEGDTEPVVEDQKKLAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKV
Sbjct: 661 TTEGDTEPVVEDQKKLAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKV 720
Query: 721 GCRLIQLLIETAYIQPPMDQLGGGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVR 780
GCRLIQLLIETAYIQPPMDQLGGGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVR
Sbjct: 721 GCRLIQLLIETAYIQPPMDQLGGGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVR 780
Query: 781 RGLEKTARHIVIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQL 840
RGLEKTARHIVIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQL
Sbjct: 781 RGLEKTARHIVIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQL 840
Query: 841 EPVFEALDTLGRTKWRVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRK 900
EPVFEALDTLGRTKWRVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRK
Sbjct: 841 EPVFEALDTLGRTKWRVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRK 900
Query: 901 WKWKLKAAKKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHL 960
WKWKLKAAKKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHL
Sbjct: 901 WKWKLKAAKKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHL 960
Query: 961 GSDMCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSA 1020
GSDMCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSA
Sbjct: 961 GSDMCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSA 1020
Query: 1021 DRPLEGNRWWLGAEDPFQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALG 1080
DRPLEGNRWWLGAEDPFQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALG
Sbjct: 1021 DRPLEGNRWWLGAEDPFQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALG 1080
Query: 1081 RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKL 1140
RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKL
Sbjct: 1081 RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKL 1140
Query: 1141 VKQTVMTSVYGVTYMGARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAAR 1200
VKQTVMTSVYGVTYMGARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAAR
Sbjct: 1141 VKQTVMTSVYGVTYMGARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAAR 1200
Query: 1201 SIMSWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMA 1260
SIMSWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMA
Sbjct: 1201 SIMSWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMA 1260
Query: 1261 TRQKTAFPPNFVHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFV 1320
TRQKTAFPPNFVHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFV
Sbjct: 1261 TRQKTAFPPNFVHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFV 1320
Query: 1321 ELYEAPILENLLKTFQKSFPSLKFPPLPDRGDFDLKDSCLRLLKSDSGGEFASSRKIGYI 1380
ELYEAPILENLLKTFQKSFPSLKFPPLPDRGDFDLKDSCLRLLKSDSGGEFASSRKIGYI
Sbjct: 1321 ELYEAPILENLLKTFQKSFPSLKFPPLPDRGDFDLKDSCLRLLKSDSGGEFASSRKIGYI 1380
Query: 1381 WWKLRNFYLHCTLIRTSVLTLQSIRGSAMLRDMAFKV 1417
WWKLRNFYLHCTLIRTSVLTLQSIRGSAMLRDMAFKV
Sbjct: 1381 WWKLRNFYLHCTLIRTSVLTLQSIRGSAMLRDMAFKV 1417
BLAST of Csor.00g303460 vs. NCBI nr
Match:
XP_022944908.1 (DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 1913 bits (4956), Expect = 0.0
Identity = 959/973 (98.56%), Postives = 968/973 (99.49%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISLFHSREV 444
MWRNIVKRAASRRDTF SRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGIS FHSREV
Sbjct: 1 MWRNIVKRAASRRDTFFSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISFFHSREV 60
Query: 445 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 504
GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES
Sbjct: 61 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 120
Query: 505 HFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS 564
+FQQPKKMVDG+GVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPY+KS
Sbjct: 121 YFQQPKKMVDGMGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYMKS 180
Query: 565 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGSS 624
LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGG+S
Sbjct: 181 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGNS 240
Query: 625 SVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKKLAKEQDKLR 684
SVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVV+DQ+KLAKEQDKLR
Sbjct: 241 SVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVKDQEKLAKEQDKLR 300
Query: 685 KKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGG 744
KKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGG
Sbjct: 301 KKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGG 360
Query: 745 PPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPLNW 804
PPDIRPAFVHTLKTITTE QKTSRRYGVIECDPLVRRGLEKTARH+VIPYMPMLVPPLNW
Sbjct: 361 PPDIRPAFVHTLKTITTEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMPMLVPPLNW 420
Query: 805 TGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSI 864
TGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSI
Sbjct: 421 TGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSI 480
Query: 865 IDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIEL 924
IDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIEL
Sbjct: 481 IDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIEL 540
Query: 925 KLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRW 984
KLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRW
Sbjct: 541 KLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRW 600
Query: 985 LKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCI 1044
LKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCI
Sbjct: 601 LKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCI 660
Query: 1045 NLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGI 1104
NLSEALRS SPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGI
Sbjct: 661 NLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGI 720
Query: 1105 AARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKR 1164
AARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKR
Sbjct: 721 AARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKR 780
Query: 1165 LKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTT 1224
LKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTT
Sbjct: 781 LKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTT 840
Query: 1225 PLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTA 1284
PLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTA
Sbjct: 841 PLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTA 900
Query: 1285 VACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSLKF 1344
VACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLL+ FQKSFP+LKF
Sbjct: 901 VACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLENFQKSFPTLKF 960
Query: 1345 PPLPDRGDFDLKD 1357
PPLPDRGDFDLKD
Sbjct: 961 PPLPDRGDFDLKD 973
BLAST of Csor.00g303460 vs. NCBI nr
Match:
XP_023542839.1 (DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1894 bits (4905), Expect = 0.0
Identity = 949/973 (97.53%), Postives = 961/973 (98.77%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISLFHSREV 444
MWRNIVKRAASRRDTF SRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGIS FHSREV
Sbjct: 1 MWRNIVKRAASRRDTFFSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISFFHSREV 60
Query: 445 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 504
GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAIS+EDLSGSEEIQELMEELSKQDKVES
Sbjct: 61 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISDEDLSGSEEIQELMEELSKQDKVES 120
Query: 505 HFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS 564
HF+QPKKMVDG+ VGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPY+KS
Sbjct: 121 HFKQPKKMVDGMRVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYMKS 180
Query: 565 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGSS 624
LFLGWFEPLRDAIAADQEFCKKKSRVSH YFDLLPADMMAVITMHKLMGLLMT+SGG+S
Sbjct: 181 LFLGWFEPLRDAIAADQEFCKKKSRVSHFAYFDLLPADMMAVITMHKLMGLLMTNSGGNS 240
Query: 625 SVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKKLAKEQDKLR 684
SVRVVQAACQIGEAIEHEVRIHKFFEN KKKKSNEKTTEGDTEPVVEDQ+K+AKEQDKLR
Sbjct: 241 SVRVVQAACQIGEAIEHEVRIHKFFENMKKKKSNEKTTEGDTEPVVEDQEKVAKEQDKLR 300
Query: 685 KKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGG 744
KKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGG
Sbjct: 301 KKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGG 360
Query: 745 PPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPLNW 804
PPDIRPAFVHTLKTIT E QKTSRRYGVIECDPLVRRGLEKTARH+VIPYMPMLVPPLNW
Sbjct: 361 PPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMPMLVPPLNW 420
Query: 805 TGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSI 864
TGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSI
Sbjct: 421 TGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSI 480
Query: 865 IDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIEL 924
IDRIWASGGRLADLVDRED PLPEEPTVEDE EIRKWKWKLKAAKKENSERHSQRCDIEL
Sbjct: 481 IDRIWASGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKAAKKENSERHSQRCDIEL 540
Query: 925 KLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRW 984
KLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRW
Sbjct: 541 KLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRW 600
Query: 985 LKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCI 1044
LKIHLANLYAGGVDKLSYKDR+SFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCI
Sbjct: 601 LKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCI 660
Query: 1045 NLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGI 1104
NLSEALRS SPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGI
Sbjct: 661 NLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGI 720
Query: 1105 AARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKR 1164
AARVLDI+RSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKR
Sbjct: 721 AARVLDIIRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKR 780
Query: 1165 LKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTT 1224
LKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTT
Sbjct: 781 LKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTT 840
Query: 1225 PLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTA 1284
PLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTA
Sbjct: 841 PLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTA 900
Query: 1285 VACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSLKF 1344
VACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLK FQKSFP+LKF
Sbjct: 901 VACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKNFQKSFPTLKF 960
Query: 1345 PPLPDRGDFDLKD 1357
PPLPDRGDFDLKD
Sbjct: 961 PPLPDRGDFDLKD 973
BLAST of Csor.00g303460 vs. NCBI nr
Match:
KAG6574025.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1883 bits (4877), Expect = 0.0
Identity = 945/975 (96.92%), Postives = 959/975 (98.36%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISLFHSREV 444
MWRNIVKRAASRRDTF SRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGIS FHSREV
Sbjct: 1 MWRNIVKRAASRRDTFFSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISFFHSREV 60
Query: 445 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 504
GFAKSNFAHSS+PVAFYGVLNHA GYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES
Sbjct: 61 GFAKSNFAHSSEPVAFYGVLNHAKGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 120
Query: 505 HFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS 564
HF+QPKKMVDG+GVGKYNILRKRQIKMETEAWEEAA+EYQELLTDMCEQKLAPNLPYIKS
Sbjct: 121 HFKQPKKMVDGMGVGKYNILRKRQIKMETEAWEEAAKEYQELLTDMCEQKLAPNLPYIKS 180
Query: 565 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGSS 624
LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGG+S
Sbjct: 181 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGNS 240
Query: 625 SVRVVQAACQIGEAIEHEVRIHKFFENTKKKK--SNEKTTEGDTEPVVEDQKKLAKEQDK 684
SVRVVQAACQIGEAIEHEVRIHKFFENTKKKK SNEKTTEGDTEPVVEDQ+KLAKEQDK
Sbjct: 241 SVRVVQAACQIGEAIEHEVRIHKFFENTKKKKKNSNEKTTEGDTEPVVEDQEKLAKEQDK 300
Query: 685 LRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLG 744
LRKKVTNLMKKQKLRQVRMIVKEHD LKPWGQ+AHVKVGCRLIQLLIETAYIQPPMDQLG
Sbjct: 301 LRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQEAHVKVGCRLIQLLIETAYIQPPMDQLG 360
Query: 745 GGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPL 804
GGPPDIRPAFVHTLKTIT E QKTSRRYGVIECDPLVRRGLEKTARH+VIPYMPMLVPPL
Sbjct: 361 GGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMPMLVPPL 420
Query: 805 NWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVL 864
NWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVL
Sbjct: 421 NWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVL 480
Query: 865 SIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDI 924
SIIDRIWASGGRLADLVDRED PLPEEPTVEDE EIRKWKWKLKAAKKENSERHSQRCDI
Sbjct: 481 SIIDRIWASGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKAAKKENSERHSQRCDI 540
Query: 925 ELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGL 984
ELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGL
Sbjct: 541 ELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGL 600
Query: 985 RWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAV 1044
RWLKIHLANLYAGGVDKLSYKDR+SFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAV
Sbjct: 601 RWLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAV 660
Query: 1045 CINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 1104
CINLSEALRS SPETTLSHMPVHQDGSCNGLQHYAALGRDKLGA AVNLVAGDKPADVYS
Sbjct: 661 CINLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYS 720
Query: 1105 GIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIK 1164
GIAARVLDI+RSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIK
Sbjct: 721 GIAARVLDIIRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIK 780
Query: 1165 KRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRW 1224
KRLKERASIADDSQLFAASCYAA+TTLTALGEMFEAARSIMSWLGECAKVIASENQPVRW
Sbjct: 781 KRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRW 840
Query: 1225 TTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMM 1284
TTPLGLPVVQPYRQLGRH IKTSLQ+L LQRETDKVMA RQKTAFPPNFVHSLDGSHMMM
Sbjct: 841 TTPLGLPVVQPYRQLGRHFIKTSLQMLTLQRETDKVMAKRQKTAFPPNFVHSLDGSHMMM 900
Query: 1285 TAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSL 1344
TAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLL+ FQKSFP+L
Sbjct: 901 TAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLENFQKSFPTL 960
Query: 1345 KFPPLPDRGDFDLKD 1357
KFPPLPDRGDFDLKD
Sbjct: 961 KFPPLPDRGDFDLKD 975
BLAST of Csor.00g303460 vs. NCBI nr
Match:
XP_023542836.1 (DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023542837.1 DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1880 bits (4869), Expect = 0.0
Identity = 944/975 (96.82%), Postives = 957/975 (98.15%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISLFHSREV 444
MWRNIVKRAASRRDTF SRKVIEDSI VEEIRSSRTLGSLKSCCLLEGSRGIS FHSREV
Sbjct: 1 MWRNIVKRAASRRDTFFSRKVIEDSISVEEIRSSRTLGSLKSCCLLEGSRGISFFHSREV 60
Query: 445 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 504
GFAKSNFAHSS+PVAFYGVLNHA GYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES
Sbjct: 61 GFAKSNFAHSSEPVAFYGVLNHAKGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 120
Query: 505 HFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS 564
HF+QPKKMVDG+ VGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS
Sbjct: 121 HFKQPKKMVDGMRVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS 180
Query: 565 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGSS 624
LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMT+SGG+S
Sbjct: 181 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTNSGGNS 240
Query: 625 SVRVVQAACQIGEAIEHEVRIHKFFENTKKKK--SNEKTTEGDTEPVVEDQKKLAKEQDK 684
SVRVVQAACQIGEAIEHEVRIHKFFEN KKKK SNEKTTEGDTEPVVEDQ+K+AKEQDK
Sbjct: 241 SVRVVQAACQIGEAIEHEVRIHKFFENMKKKKRNSNEKTTEGDTEPVVEDQEKVAKEQDK 300
Query: 685 LRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLG 744
LRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLG
Sbjct: 301 LRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLG 360
Query: 745 GGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPL 804
GGPPDIRPAFVHTLKTIT E QKTSRRYGVIECDPLVRRGLEKTARH+VIPYMPMLVPPL
Sbjct: 361 GGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMPMLVPPL 420
Query: 805 NWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVL 864
NWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVL
Sbjct: 421 NWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVL 480
Query: 865 SIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDI 924
SIIDRIW SGGRLADLVDRED PLPEEPTVEDE EIRKWKWKLKAAKKENSERHSQRCDI
Sbjct: 481 SIIDRIWTSGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKAAKKENSERHSQRCDI 540
Query: 925 ELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGL 984
ELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGL
Sbjct: 541 ELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGL 600
Query: 985 RWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAV 1044
RWLKIHLANLYAGGVDKLSYKDR+SFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAV
Sbjct: 601 RWLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAV 660
Query: 1045 CINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 1104
CINLSEALRS SPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS
Sbjct: 661 CINLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 720
Query: 1105 GIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIK 1164
GIAARVLDI+RSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIK
Sbjct: 721 GIAARVLDIIRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIK 780
Query: 1165 KRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRW 1224
KRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRW
Sbjct: 781 KRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRW 840
Query: 1225 TTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMM 1284
TTPLGLPVVQPYRQLGRH IKTSLQ+L LQRETDKVMA RQKTAFPPNFVHSLDGSHMMM
Sbjct: 841 TTPLGLPVVQPYRQLGRHFIKTSLQMLTLQRETDKVMAKRQKTAFPPNFVHSLDGSHMMM 900
Query: 1285 TAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSL 1344
TAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLL+ FQKSFP+L
Sbjct: 901 TAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLENFQKSFPTL 960
Query: 1345 KFPPLPDRGDFDLKD 1357
KFPPLPDRGDFDLKD
Sbjct: 961 KFPPLPDRGDFDLKD 975
BLAST of Csor.00g303460 vs. ExPASy TrEMBL
Match:
A0A6J1FZC4 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449299 PE=3 SV=1)
HSP 1 Score: 1913 bits (4956), Expect = 0.0
Identity = 959/973 (98.56%), Postives = 968/973 (99.49%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISLFHSREV 444
MWRNIVKRAASRRDTF SRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGIS FHSREV
Sbjct: 1 MWRNIVKRAASRRDTFFSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISFFHSREV 60
Query: 445 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 504
GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES
Sbjct: 61 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 120
Query: 505 HFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS 564
+FQQPKKMVDG+GVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPY+KS
Sbjct: 121 YFQQPKKMVDGMGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYMKS 180
Query: 565 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGSS 624
LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGG+S
Sbjct: 181 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGNS 240
Query: 625 SVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKKLAKEQDKLR 684
SVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVV+DQ+KLAKEQDKLR
Sbjct: 241 SVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVKDQEKLAKEQDKLR 300
Query: 685 KKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGG 744
KKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGG
Sbjct: 301 KKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGG 360
Query: 745 PPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPLNW 804
PPDIRPAFVHTLKTITTE QKTSRRYGVIECDPLVRRGLEKTARH+VIPYMPMLVPPLNW
Sbjct: 361 PPDIRPAFVHTLKTITTEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMPMLVPPLNW 420
Query: 805 TGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSI 864
TGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSI
Sbjct: 421 TGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSI 480
Query: 865 IDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIEL 924
IDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIEL
Sbjct: 481 IDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIEL 540
Query: 925 KLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRW 984
KLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRW
Sbjct: 541 KLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRW 600
Query: 985 LKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCI 1044
LKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCI
Sbjct: 601 LKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCI 660
Query: 1045 NLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGI 1104
NLSEALRS SPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGI
Sbjct: 661 NLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGI 720
Query: 1105 AARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKR 1164
AARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKR
Sbjct: 721 AARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKR 780
Query: 1165 LKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTT 1224
LKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTT
Sbjct: 781 LKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTT 840
Query: 1225 PLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTA 1284
PLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTA
Sbjct: 841 PLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTA 900
Query: 1285 VACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSLKF 1344
VACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLL+ FQKSFP+LKF
Sbjct: 901 VACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLENFQKSFPTLKF 960
Query: 1345 PPLPDRGDFDLKD 1357
PPLPDRGDFDLKD
Sbjct: 961 PPLPDRGDFDLKD 973
BLAST of Csor.00g303460 vs. ExPASy TrEMBL
Match:
A0A6J1FZD9 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449300 PE=3 SV=1)
HSP 1 Score: 1874 bits (4855), Expect = 0.0
Identity = 943/975 (96.72%), Postives = 955/975 (97.95%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISLFHSREV 444
MWRNIVKRAASRRDTF SRKVIEDSIFVEEIRSSRTLGSLKS CLLEGSRGIS FHSREV
Sbjct: 1 MWRNIVKRAASRRDTFFSRKVIEDSIFVEEIRSSRTLGSLKSSCLLEGSRGISFFHSREV 60
Query: 445 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 504
GFAKSNFAHSS+ VAFYGVLNHA GYATAAEAAISEEDLSGSEEIQELMEELSKQDKV S
Sbjct: 61 GFAKSNFAHSSEHVAFYGVLNHAKGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVGS 120
Query: 505 HFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS 564
HF+QPKKMVDG+GVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS
Sbjct: 121 HFKQPKKMVDGMGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS 180
Query: 565 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGSS 624
LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGG+S
Sbjct: 181 LFLGWFEPLRDAIAADQEFCKKKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGNS 240
Query: 625 SVRVVQAACQIGEAIEHEVRIHKFFENTKKKK--SNEKTTEGDTEPVVEDQKKLAKEQDK 684
SVRVVQAACQIGEAIEHEVRIHKFFENTKKKK SNEKTTEGDTEPVVEDQ+KLAKEQDK
Sbjct: 241 SVRVVQAACQIGEAIEHEVRIHKFFENTKKKKKNSNEKTTEGDTEPVVEDQEKLAKEQDK 300
Query: 685 LRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLG 744
LRKKVTNLMKKQKLRQVRMIVKEHD LKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLG
Sbjct: 301 LRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLG 360
Query: 745 GGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPL 804
GGPPDIRPAFVHTLKTIT E QKTSRRYGVIECDPLVRRGLEKTARH+VIPYMPMLVPPL
Sbjct: 361 GGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMPMLVPPL 420
Query: 805 NWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVL 864
NWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVL
Sbjct: 421 NWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVL 480
Query: 865 SIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDI 924
SIIDRIW SGGRLADLVDRED PLPEEPTVEDE EIRKWKWKLK AKKENSERHSQRCDI
Sbjct: 481 SIIDRIWTSGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKGAKKENSERHSQRCDI 540
Query: 925 ELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGL 984
ELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGL
Sbjct: 541 ELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGL 600
Query: 985 RWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAV 1044
RWLKIHLANLYAGGVDKLSYKDR+SFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAV
Sbjct: 601 RWLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAV 660
Query: 1045 CINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 1104
CINLSEALRS SPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS
Sbjct: 661 CINLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 720
Query: 1105 GIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIK 1164
GIAARVLDI+RSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIK
Sbjct: 721 GIAARVLDIIRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIK 780
Query: 1165 KRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRW 1224
KRLKERASIADDSQLFAASCYAA+TTLTALGEMFEAARSIMSWLGECAKVIASENQPVRW
Sbjct: 781 KRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRW 840
Query: 1225 TTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMM 1284
TTPLGLPVVQPYRQLGRH IKTSLQ+L LQRETDKVMA RQKTAFPPNFVHSLDGSHMMM
Sbjct: 841 TTPLGLPVVQPYRQLGRHFIKTSLQMLTLQRETDKVMAKRQKTAFPPNFVHSLDGSHMMM 900
Query: 1285 TAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSL 1344
TAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLL+ FQKSFP+L
Sbjct: 901 TAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLENFQKSFPTL 960
Query: 1345 KFPPLPDRGDFDLKD 1357
KFPPLPDRGDFDLKD
Sbjct: 961 KFPPLPDRGDFDLKD 975
BLAST of Csor.00g303460 vs. ExPASy TrEMBL
Match:
A0A6J1HS83 (DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111467347 PE=3 SV=1)
HSP 1 Score: 1850 bits (4791), Expect = 0.0
Identity = 926/974 (95.07%), Postives = 953/974 (97.84%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISLFHSREV 444
MWRNIVKRAASRRDTF SRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGI+ FHSREV
Sbjct: 1 MWRNIVKRAASRRDTFFSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGINFFHSREV 60
Query: 445 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 504
GFAKSN AHSS+P+AFYGVLNHA GYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES
Sbjct: 61 GFAKSNCAHSSEPLAFYGVLNHAKGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVES 120
Query: 505 HFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKS 564
HF+QPKKMVDG+G+GKYNILRKRQIKMETEAWE+AAREYQELLTDMCEQKL PNLPY+KS
Sbjct: 121 HFKQPKKMVDGMGIGKYNILRKRQIKMETEAWEKAAREYQELLTDMCEQKLVPNLPYMKS 180
Query: 565 LFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGS 624
LFLGWFEPLRDAIAADQEF K KK+RVSHAPYFDLLPADMMAVITMHKLMGLLMT+SGG+
Sbjct: 181 LFLGWFEPLRDAIAADQEFFKDKKTRVSHAPYFDLLPADMMAVITMHKLMGLLMTNSGGN 240
Query: 625 SSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKKLAKEQDKL 684
SSVRVVQAACQIGEAIEHEVRIHKFFE TKKK SNEKTTEGDTEPVVEDQ+KLAK+QDKL
Sbjct: 241 SSVRVVQAACQIGEAIEHEVRIHKFFEKTKKKNSNEKTTEGDTEPVVEDQEKLAKQQDKL 300
Query: 685 RKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGG 744
RKKVTNLMKKQKLRQVRMIVKEHD LKPWGQDAHVKVGCRLIQLLIETAYIQPP+DQLG
Sbjct: 301 RKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQDAHVKVGCRLIQLLIETAYIQPPIDQLGE 360
Query: 745 GPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPLN 804
GPPDIRPAFVHTLKTIT E QKTSRRYGVIECDPLVRRGLEKTARH+VIPYMPMLVPPL
Sbjct: 361 GPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMPMLVPPLY 420
Query: 805 WTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLS 864
WTGYDKGA+LFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKR+LS
Sbjct: 421 WTGYDKGAYLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRILS 480
Query: 865 IIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIE 924
IIDRIWASGGRLADLVDRED PLPEEPTVEDE EIRKWKWK+KAAKKENSERHSQRCDIE
Sbjct: 481 IIDRIWASGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKVKAAKKENSERHSQRCDIE 540
Query: 925 LKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLR 984
LKLAVARKMKEEEGFYYPHNLDFRGRAYPMHP+LNHLGSDMCRGILEFAEGRPLGESGLR
Sbjct: 541 LKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILEFAEGRPLGESGLR 600
Query: 985 WLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVC 1044
WLKIHLANLYAGGVDKLSYKDR+SFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVC
Sbjct: 601 WLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVC 660
Query: 1045 INLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSG 1104
INLSEALRS SPETT+SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSG
Sbjct: 661 INLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSG 720
Query: 1105 IAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKK 1164
IAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIK+
Sbjct: 721 IAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKR 780
Query: 1165 RLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWT 1224
RLKERASIADDSQLFAA+CYAA+TTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWT
Sbjct: 781 RLKERASIADDSQLFAAACYAAKTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWT 840
Query: 1225 TPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMT 1284
TPLGLPVVQPYRQLGRHLIKTSLQVL LQRETDKVMA RQKTAFPPNFVHSLDGSHMMMT
Sbjct: 841 TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMAKRQKTAFPPNFVHSLDGSHMMMT 900
Query: 1285 AVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSLK 1344
AVAC+RAGLNFAGVHDSYWTHACDVD MNRLLREKFVELYEAPILENLL+ FQKSFP+LK
Sbjct: 901 AVACKRAGLNFAGVHDSYWTHACDVDEMNRLLREKFVELYEAPILENLLENFQKSFPTLK 960
Query: 1345 FPPLPDRGDFDLKD 1357
FPPLPDRGDFDLKD
Sbjct: 961 FPPLPDRGDFDLKD 974
BLAST of Csor.00g303460 vs. ExPASy TrEMBL
Match:
A0A6J1D747 (DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111017540 PE=3 SV=1)
HSP 1 Score: 1722 bits (4459), Expect = 0.0
Identity = 858/981 (87.46%), Postives = 916/981 (93.37%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLS-------RKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGIS 444
MWRNIVKRAASR+D S RKVIED IF+E+IRSSRT L +C L G R
Sbjct: 1 MWRNIVKRAASRKDILFSQPSSSRFRKVIEDHIFLEQIRSSRTHRGLNTCRQLAGFR--- 60
Query: 445 LFHSREVGFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELS 504
+GF + HSS+P+ F+GVLNHA GYATAAEA ISEEDLSGSEEIQELMEEL+
Sbjct: 61 -----RIGFLHPDNPHSSEPLLFHGVLNHAKGYATAAEATISEEDLSGSEEIQELMEELT 120
Query: 505 KQDKVESHFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 564
KQ+K+E HF+QPK+MVDG+GV KYN+LRKRQ+KMETEAWEEAAREYQELLTDMCEQKLAP
Sbjct: 121 KQEKLEHHFKQPKRMVDGMGVSKYNMLRKRQVKMETEAWEEAAREYQELLTDMCEQKLAP 180
Query: 565 NLPYIKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLL 624
NLPY+KSLFLGWFEPLRDAIAADQE+CK KK+RVSHAPYFDL+PADMMAVITMHKLMGLL
Sbjct: 181 NLPYVKSLFLGWFEPLRDAIAADQEYCKDKKNRVSHAPYFDLIPADMMAVITMHKLMGLL 240
Query: 625 MTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKKL 684
MT+SGG+ SVRVVQAACQIGEAIEHEVRIHKFFE TKKK NEK TE + +PV E+Q+KL
Sbjct: 241 MTNSGGNGSVRVVQAACQIGEAIEHEVRIHKFFEKTKKKNVNEKNTEAEADPVAEEQEKL 300
Query: 685 AKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQP 744
AKEQDKLRKKVT LMKKQKL+QVRMIVKE D LKPWGQDAHVKVGCRL+QLL+ETAYIQP
Sbjct: 301 AKEQDKLRKKVTKLMKKQKLQQVRMIVKEQDDLKPWGQDAHVKVGCRLMQLLMETAYIQP 360
Query: 745 PMDQLGGGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMP 804
P+DQLG GPPDIRPAFVHTLKTIT E QKTSRRYGVIECDPLVRRGLEKTARH VIPY+P
Sbjct: 361 PIDQLGNGPPDIRPAFVHTLKTITREAQKTSRRYGVIECDPLVRRGLEKTARHTVIPYLP 420
Query: 805 MLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWR 864
MLVPPLNWTGYDKGA+LFLPSYVMRIHGAKQQREAVKR PKKQLEPVFEALDTLGRTKWR
Sbjct: 421 MLVPPLNWTGYDKGAYLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVFEALDTLGRTKWR 480
Query: 865 VNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERH 924
VNKRVLS+IDRIWASGGRLADLVDRED PLPEEP V+DE EIRKWKWK+KAAKKENSERH
Sbjct: 481 VNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPNVDDEAEIRKWKWKVKAAKKENSERH 540
Query: 925 SQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRP 984
SQRCDIELKLAVARKMKEE+GFYYPHNLDFRGRAYPMHP+LNHLGSD+CRG+LEFAEGRP
Sbjct: 541 SQRCDIELKLAVARKMKEEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRP 600
Query: 985 LGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDP 1044
LGESGL WLKIHLANLYAGGVDKLSYKDR+SFTENHL+EIFDSADRPLEGNRWWLGAEDP
Sbjct: 601 LGESGLYWLKIHLANLYAGGVDKLSYKDRVSFTENHLEEIFDSADRPLEGNRWWLGAEDP 660
Query: 1045 FQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 1104
FQCLAVCINLSEALRS SPETT+SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK
Sbjct: 661 FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
Query: 1105 PADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMG 1164
PADVYSGIA+RVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTY+G
Sbjct: 721 PADVYSGIASRVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVG 780
Query: 1165 ARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASE 1224
AR+QIK+RLKER+SI+DDS+LFAASCYAA+TTLTALGEMFEAARSIM+WLGECAKVIASE
Sbjct: 781 AREQIKRRLKERSSISDDSKLFAASCYAAKTTLTALGEMFEAARSIMNWLGECAKVIASE 840
Query: 1225 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLD 1284
NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVL LQRETD+VM RQ+TAFPPNFVHSLD
Sbjct: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDQVMVKRQRTAFPPNFVHSLD 900
Query: 1285 GSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQ 1344
GSHMMMTAVAC+RAGLNFAGVHDSYWTHACDVD MNR+LREKFVELYEAPILENLL+ FQ
Sbjct: 901 GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENFQ 960
Query: 1345 KSFPSLKFPPLPDRGDFDLKD 1357
KSFP+LKFPPLPDRGDFDLKD
Sbjct: 961 KSFPTLKFPPLPDRGDFDLKD 973
BLAST of Csor.00g303460 vs. ExPASy TrEMBL
Match:
A0A5E4F8X8 (DNA-directed RNA polymerase OS=Prunus dulcis OX=3755 GN=ALMOND_2B020531 PE=3 SV=1)
HSP 1 Score: 1548 bits (4007), Expect = 0.0
Identity = 778/997 (78.03%), Postives = 869/997 (87.16%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVI-----------EDSIFVEEIRSSRTLGSLKSCCLLEGS 444
MWRN+ K+ ASR+ S+ ++S F+++ R + + L+ G
Sbjct: 1 MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60
Query: 445 RGISLFHSREVGFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAIS---EEDLSGSEEIQ 504
R +S S++ + + + S P G N+A GYA+ AEA S EED SGSEEIQ
Sbjct: 61 RQVSDMASQKDELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSEEIQ 120
Query: 505 ELMEELSKQDK-VESHFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTD 564
E++E+L +++ VESHF+QPK++V G+GVGKYN+LRKRQIK+ETEAW+EAA+EYQELLTD
Sbjct: 121 EMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLTD 180
Query: 565 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQEFCKK-KSRVSHAPYFDLLPADMMAVIT 624
MCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQ+ CK+ SR SHAPYFD LPAD MAVIT
Sbjct: 181 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADKMAVIT 240
Query: 625 MHKLMGLLMTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSN-EKTTEGDTE 684
MHKLMGLLMT++GG SVRVVQAAC IGEAIE EVRIH+F E TKKKK+ +K E D+
Sbjct: 241 MHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEQEVRIHRFLEKTKKKKNTTDKKAEADSV 300
Query: 685 PVV-------EDQKKLAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKV 744
PV ++Q+KL KEQ++LRKKV L+K+QK++QVR IVKE + LKPWGQ+AHVKV
Sbjct: 301 PVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQEAHVKV 360
Query: 745 GCRLIQLLIETAYIQPPMDQLGGGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVR 804
GCRLIQLL++TAYIQPP+DQ+G GPPDIRPAFVH LKTIT + QKTSRRYGVIECDPLVR
Sbjct: 361 GCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVIECDPLVR 420
Query: 805 RGLEKTARHIVIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQL 864
+G+EKTARH+V+PYMPMLVPP+NWTGYD+GA+LFLPSYVMR HGAKQQRE VKR P+KQL
Sbjct: 421 KGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQL 480
Query: 865 EPVFEALDTLGRTKWRVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRK 924
EPVFEALDTLG TKWRVNKRVL +IDRIWASGGRLADLVDRED PLPEEP EDE EIRK
Sbjct: 481 EPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRK 540
Query: 925 WKWKLKAAKKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHL 984
WKWKLKAAKKENSERHSQRCDIELKLA +RKMK+EEGFYYPHNLDFRGRAYPMHP+LNHL
Sbjct: 541 WKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 600
Query: 985 GSDMCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSA 1044
GSDMCRGILEF+EGR LG+SGLRWLKIHLANLYAGGVDKLS+ DR +FTENH+DEIFDSA
Sbjct: 601 GSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDEIFDSA 660
Query: 1045 DRPLEGNRWWLGAEDPFQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALG 1104
DRPLEG RWWLGAEDPFQCLA CINL EALRS SPETT+S+MPVHQDGSCNGLQHYAALG
Sbjct: 661 DRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHYAALG 720
Query: 1105 RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKL 1164
RDKLGAAAVNLV GDKPADVYSGIAARVLDIMR+DAEKDPATNPNALHARLLINQVDRKL
Sbjct: 721 RDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQVDRKL 780
Query: 1165 VKQTVMTSVYGVTYMGARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAAR 1224
VKQTVMTSVYGVTY+GARDQIK+RLKER SIADD+ LFAA+CYAARTTLTALGEMFEAAR
Sbjct: 781 VKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALGEMFEAAR 840
Query: 1225 SIMSWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMA 1284
SIMSWLGECAKVIASENQPVRW TPLGLPVVQPYRQLGRHLIKTSLQVL LQRETDKVM
Sbjct: 841 SIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMV 900
Query: 1285 TRQKTAFPPNFVHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFV 1344
RQ+TAFPPNFVHSLDGSHMMMTAVAC++AGLNFAGVHDSYWTHACD+D MNR+LREKFV
Sbjct: 901 KRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILREKFV 960
Query: 1345 ELYEAPILENLLKTFQKSFPSLKFPPLPDRGDFDLKD 1357
ELYEAPILENLL+ FQ+SFP+L FPPLPDRGDFDL+D
Sbjct: 961 ELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRD 997
BLAST of Csor.00g303460 vs. TAIR 10
Match:
AT1G68990.1 (male gametophyte defective 3 )
HSP 1 Score: 1308.5 bits (3385), Expect = 0.0e+00
Identity = 652/981 (66.46%), Postives = 784/981 (79.92%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISLFHSREV 444
MWRNI+ RA+ R+ FLS + S +R G L S L G+S+ E+
Sbjct: 1 MWRNILGRASLRKVKFLS----DSSSSGTHYPVNRVRGILSSVNLSGVRNGLSINPVNEM 60
Query: 445 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAIS---EEDLSGSEEIQELMEELSKQ-- 504
G S+F H G GYATAA+A S E++ SGS+E+ EL+ E+ K+
Sbjct: 61 G-GLSSFRH--------GQCYVFEGYATAAQAIDSTDPEDESSGSDEVNELITEMEKETE 120
Query: 505 ---DKVESHFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLA 564
K PK+++ G+G K+ +L++RQ+KMETE WE AARE +E+L DMCEQKLA
Sbjct: 121 RIRKKARLAAIPPKRVIAGMGAQKFYMLKQRQVKMETEEWERAARECREILADMCEQKLA 180
Query: 565 PNLPYIKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGL 624
PNLPY+KSLFLGWFEP+R+AI D + K KK ++ +AP+ + LPAD MAVITMHK+MGL
Sbjct: 181 PNLPYMKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGL 240
Query: 625 LMTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKK 684
LMT++ G V++V AA QIGEA+E EVRI+ F + KK + +KT + E V E+
Sbjct: 241 LMTNAEGVGIVKLVNAATQIGEAVEQEVRINSFLQKKNKKNATDKTINTEAENVSEE--I 300
Query: 685 LAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQ 744
+AKE +K RK+VT LM+K KLRQV+ +V++HD KPWGQ+A VKVG RLIQLL+E AYIQ
Sbjct: 301 VAKETEKARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQ 360
Query: 745 PPMDQLGGGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYM 804
PP +Q GPPDIRPAF +T+T E KTSRRYG IECDPLV +GL+K+ARH+VIPY+
Sbjct: 361 PPAEQFDDGPPDIRPAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSARHMVIPYL 420
Query: 805 PMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKW 864
PML+PP NWTGYD+GAH FLPSYVMR HGAKQQR +KR PK+QLEPV+EALDTLG TKW
Sbjct: 421 PMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKW 480
Query: 865 RVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSER 924
++NK+VLS++DRIWA+GGR+ LVDRED P+PEEP ED+E+ + W+W+ K A K+N+ER
Sbjct: 481 KINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNER 540
Query: 925 HSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGR 984
HSQRCDIELKL VARKMK+EEGFYYPHN+DFRGRAYP+HP+LNHLGSD+CRGILEF EG+
Sbjct: 541 HSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGK 600
Query: 985 PLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAED 1044
PLG+SGLRWLKIH+ANLYAGGVDKL+Y+DR++FTE+HL++IFDS+DRPLEG RWWL AED
Sbjct: 601 PLGKSGLRWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAED 660
Query: 1045 PFQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGD 1104
PFQCLA CINLSEALRS PE +SH+P+HQDGSCNGLQHYAALGRDKLGA AVNLV G+
Sbjct: 661 PFQCLAACINLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGE 720
Query: 1105 KPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYM 1164
KPADVY+ IAARVL IM+ DAE+DP T PNA +A+L+++QVDRKLVKQTVMTSVYGVTY
Sbjct: 721 KPADVYTEIAARVLKIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYS 780
Query: 1165 GARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIAS 1224
GARDQIKKRLKER + DDS F ASCYAA+ TL AL EMFEAAR+I SW G+CAK+IAS
Sbjct: 781 GARDQIKKRLKERGTFEDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIAS 840
Query: 1225 ENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSL 1284
EN V WTTPLGLPVVQPYR+ GRHL+KT+LQVL L RETDKVMA RQ TAF PNF+HSL
Sbjct: 841 ENNAVCWTTPLGLPVVQPYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSL 900
Query: 1285 DGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTF 1344
DGSHMMMTAVAC RAGL+FAGVHDS+WTHACDVDVMN +LREKFVELYE PILENLL++F
Sbjct: 901 DGSHMMMTAVACNRAGLSFAGVHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESF 960
Query: 1345 QKSFPSLKFPPLPDRGDFDLK 1357
QKSFP + FPPLP+RGDFDL+
Sbjct: 961 QKSFPDISFPPLPERGDFDLR 966
BLAST of Csor.00g303460 vs. TAIR 10
Match:
AT1G68990.2 (male gametophyte defective 3 )
HSP 1 Score: 1301.6 bits (3367), Expect = 0.0e+00
Identity = 652/988 (65.99%), Postives = 784/988 (79.35%), Query Frame = 0
Query: 385 MWRNIVKRAASRRDTFLSRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGISLFHSREV 444
MWRNI+ RA+ R+ FLS + S +R G L S L G+S+ E+
Sbjct: 1 MWRNILGRASLRKVKFLS----DSSSSGTHYPVNRVRGILSSVNLSGVRNGLSINPVNEM 60
Query: 445 GFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAIS---EEDLSGSEEIQELMEELSKQ-- 504
G S+F H G GYATAA+A S E++ SGS+E+ EL+ E+ K+
Sbjct: 61 G-GLSSFRH--------GQCYVFEGYATAAQAIDSTDPEDESSGSDEVNELITEMEKETE 120
Query: 505 ---DKVESHFQQPKKMVDGVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLA 564
K PK+++ G+G K+ +L++RQ+KMETE WE AARE +E+L DMCEQKLA
Sbjct: 121 RIRKKARLAAIPPKRVIAGMGAQKFYMLKQRQVKMETEEWERAARECREILADMCEQKLA 180
Query: 565 PNLPYIKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGL 624
PNLPY+KSLFLGWFEP+R+AI D + K KK ++ +AP+ + LPAD MAVITMHK+MGL
Sbjct: 181 PNLPYMKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGL 240
Query: 625 LMTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKK 684
LMT++ G V++V AA QIGEA+E EVRI+ F + KK + +KT + E V E+
Sbjct: 241 LMTNAEGVGIVKLVNAATQIGEAVEQEVRINSFLQKKNKKNATDKTINTEAENVSEE--I 300
Query: 685 LAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQ 744
+AKE +K RK+VT LM+K KLRQV+ +V++HD KPWGQ+A VKVG RLIQLL+E AYIQ
Sbjct: 301 VAKETEKARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQ 360
Query: 745 PPMDQLGGGPPDIRPAFVHTLKTITTEVQKTSRRYGVIECDPLVRRGLEKT-------AR 804
PP +Q GPPDIRPAF +T+T E KTSRRYG IECDPLV +GL+K+ AR
Sbjct: 361 PPAEQFDDGPPDIRPAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSVSRIVDYAR 420
Query: 805 HIVIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALD 864
H+VIPY+PML+PP NWTGYD+GAH FLPSYVMR HGAKQQR +KR PK+QLEPV+EALD
Sbjct: 421 HMVIPYLPMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALD 480
Query: 865 TLGRTKWRVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAA 924
TLG TKW++NK+VLS++DRIWA+GGR+ LVDRED P+PEEP ED+E+ + W+W+ K A
Sbjct: 481 TLGNTKWKINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKA 540
Query: 925 KKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGI 984
K+N+ERHSQRCDIELKL VARKMK+EEGFYYPHN+DFRGRAYP+HP+LNHLGSD+CRGI
Sbjct: 541 IKQNNERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGI 600
Query: 985 LEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNR 1044
LEF EG+PLG+SGLRWLKIH+ANLYAGGVDKL+Y+DR++FTE+HL++IFDS+DRPLEG R
Sbjct: 601 LEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKR 660
Query: 1045 WWLGAEDPFQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAA 1104
WWL AEDPFQCLA CINLSEALRS PE +SH+P+HQDGSCNGLQHYAALGRDKLGA A
Sbjct: 661 WWLNAEDPFQCLAACINLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADA 720
Query: 1105 VNLVAGDKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTS 1164
VNLV G+KPADVY+ IAARVL IM+ DAE+DP T PNA +A+L+++QVDRKLVKQTVMTS
Sbjct: 721 VNLVTGEKPADVYTEIAARVLKIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTS 780
Query: 1165 VYGVTYMGARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGE 1224
VYGVTY GARDQIKKRLKER + DDS F ASCYAA+ TL AL EMFEAAR+I SW G+
Sbjct: 781 VYGVTYSGARDQIKKRLKERGTFEDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGD 840
Query: 1225 CAKVIASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFP 1284
CAK+IASEN V WTTPLGLPVVQPYR+ GRHL+KT+LQVL L RETDKVMA RQ TAF
Sbjct: 841 CAKIIASENNAVCWTTPLGLPVVQPYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFA 900
Query: 1285 PNFVHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPIL 1344
PNF+HSLDGSHMMMTAVAC RAGL+FAGVHDS+WTHACDVDVMN +LREKFVELYE PIL
Sbjct: 901 PNFIHSLDGSHMMMTAVACNRAGLSFAGVHDSFWTHACDVDVMNTILREKFVELYEKPIL 960
Query: 1345 ENLLKTFQKSFPSLKFPPLPDRGDFDLK 1357
ENLL++FQKSFP + FPPLP+RGDFDL+
Sbjct: 961 ENLLESFQKSFPDISFPPLPERGDFDLR 973
BLAST of Csor.00g303460 vs. TAIR 10
Match:
AT5G15700.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1264.2 bits (3270), Expect = 0.0e+00
Identity = 654/1018 (64.24%), Postives = 773/1018 (75.93%), Query Frame = 0
Query: 350 SAATSLLQGDKTNSLLRFELLELVVVGIRNPYYQR--MWRNIVKRAASRRDTFLSRKVIE 409
SA T L ++T L + NP Q MWRNI K+A SR L+
Sbjct: 3 SAQTPLFLANQTKVFDHLIPLHKPFISSPNPVSQSFPMWRNIAKQAISRSAARLNVSSQT 62
Query: 410 DSIFVEEIRS--SRTLG----SLKSCCLLEGSRGISLFHSREVGFAKSNFAHSSDPVAFY 469
+ V S S+ L L S C +G R +S RE F+KS S
Sbjct: 63 RGLLVSSPESIFSKNLSFRFPVLGSPCHGKGFRCLSGITRRE-EFSKSERCLS------- 122
Query: 470 GVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVESHFQQPKKMVDGVGVG-- 529
G L A GY + AE + D+ E+ EL++E+ K+ K ESH K D G+G
Sbjct: 123 GTL--ARGYTSVAEEEVLSTDVEEEPEVDELLKEMKKEKKRESHRSWRMKKQDQFGMGRT 182
Query: 530 KYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAA 589
K+ L +RQ+K+ETE WE AA EY ELLTDMCEQKLAPNLPY+KSLFLGWFEPLRDAIA
Sbjct: 183 KFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAK 242
Query: 590 DQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGSSSVRVVQAACQIGEA 649
DQE + KS+ ++A Y D LPAD ++VITMHKLMG LMT G + V+VV AAC +G+A
Sbjct: 243 DQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMT-GGDNGCVKVVHAACTVGDA 302
Query: 650 IEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKKLAKEQDKLRKKVTNLMKKQKLRQ 709
IE E+RI F + KKKK ++ G E + KEQDKLRKKV L+KKQKL
Sbjct: 303 IEQEIRICTFLD--KKKKGDDNEESGGVE-----NETSMKEQDKLRKKVNELIKKQKLSA 362
Query: 710 VRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGGPPDIRPAFVHTLKT 769
VR I++ HD+ KPW D KVG RLI+LL+ TAYIQ P DQ PD+RPAFVHT K
Sbjct: 363 VRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFK- 422
Query: 770 ITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPLNWTGYDKGAHLFLPSY 829
+ + R+YGVIECDPLVR+GLEK+ R+ V+PYMPMLVPPL W+GYDKGA+LFL SY
Sbjct: 423 VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSY 482
Query: 830 VMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSIIDRIWASGGRLADL 889
+M+ HGAKQQREA+K PK QL+PVFEALDTLG TKWRVNKRVL+++DRIW+SGG +AD+
Sbjct: 483 IMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADM 542
Query: 890 VDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIELKLAVARKMKEEEGF 949
VDR D PLPE+P EDE ++KWKW++K+AKK NSERHSQRCD ELKL+VARKMK+EE F
Sbjct: 543 VDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAF 602
Query: 950 YYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVD 1009
YYPHN+DFRGRAYPM PHLNHLGSD+CRG+LEFAEGRP+G SGLRWLKIHLANLYAGGVD
Sbjct: 603 YYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVD 662
Query: 1010 KLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCINLSEALRSSSPETT 1069
KLS R++FTENHLD+IFDSADRPLEG+RWWL AEDPFQCLAVCI+L+EALRS SPET
Sbjct: 663 KLSLDGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETV 722
Query: 1070 LSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRSDAEK 1129
LSH+P+HQDGSCNGLQHYAALGRD LGA AVNLVAG+KPADVYSGIA RVLDIMR DA++
Sbjct: 723 LSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADR 782
Query: 1130 DPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKRLKERASIADDSQLF 1189
DP P AL AR L+NQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER+ D+ ++F
Sbjct: 783 DPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVF 842
Query: 1190 AASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLG 1249
A+CYAA+ TL A+ EMF+AAR+IM W GECAK+IASEN+ VRWTTPLGLPVVQPY Q+G
Sbjct: 843 GAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMG 902
Query: 1250 RHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTAVACRRAGLNFAGVH 1309
L+KTSLQ L+LQ ETD+V+ RQ+TAFPPNF+HSLDGSHMMMTAVAC+RAG+ FAGVH
Sbjct: 903 TKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGVCFAGVH 962
Query: 1310 DSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSLKFPPLPDRGDFDLK 1357
DS+WTHACDVD +N +LREKFVELY PILENLL++F++SFP L FPPLP+RGD DLK
Sbjct: 963 DSFWTHACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGDLDLK 1001
BLAST of Csor.00g303460 vs. TAIR 10
Match:
AT5G15700.2 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1264.2 bits (3270), Expect = 0.0e+00
Identity = 654/1018 (64.24%), Postives = 773/1018 (75.93%), Query Frame = 0
Query: 350 SAATSLLQGDKTNSLLRFELLELVVVGIRNPYYQR--MWRNIVKRAASRRDTFLSRKVIE 409
SA T L ++T L + NP Q MWRNI K+A SR L+
Sbjct: 3 SAQTPLFLANQTKVFDHLIPLHKPFISSPNPVSQSFPMWRNIAKQAISRSAARLNVSSQT 62
Query: 410 DSIFVEEIRS--SRTLG----SLKSCCLLEGSRGISLFHSREVGFAKSNFAHSSDPVAFY 469
+ V S S+ L L S C +G R +S RE F+KS S
Sbjct: 63 RGLLVSSPESIFSKNLSFRFPVLGSPCHGKGFRCLSGITRRE-EFSKSERCLS------- 122
Query: 470 GVLNHANGYATAAEAAISEEDLSGSEEIQELMEELSKQDKVESHFQQPKKMVDGVGVG-- 529
G L A GY + AE + D+ E+ EL++E+ K+ K ESH K D G+G
Sbjct: 123 GTL--ARGYTSVAEEEVLSTDVEEEPEVDELLKEMKKEKKRESHRSWRMKKQDQFGMGRT 182
Query: 530 KYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAA 589
K+ L +RQ+K+ETE WE AA EY ELLTDMCEQKLAPNLPY+KSLFLGWFEPLRDAIA
Sbjct: 183 KFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAK 242
Query: 590 DQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSSGGSSSVRVVQAACQIGEA 649
DQE + KS+ ++A Y D LPAD ++VITMHKLMG LMT G + V+VV AAC +G+A
Sbjct: 243 DQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMT-GGDNGCVKVVHAACTVGDA 302
Query: 650 IEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQKKLAKEQDKLRKKVTNLMKKQKLRQ 709
IE E+RI F + KKKK ++ G E + KEQDKLRKKV L+KKQKL
Sbjct: 303 IEQEIRICTFLD--KKKKGDDNEESGGVE-----NETSMKEQDKLRKKVNELIKKQKLSA 362
Query: 710 VRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQLGGGPPDIRPAFVHTLKT 769
VR I++ HD+ KPW D KVG RLI+LL+ TAYIQ P DQ PD+RPAFVHT K
Sbjct: 363 VRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFK- 422
Query: 770 ITTEVQKTSRRYGVIECDPLVRRGLEKTARHIVIPYMPMLVPPLNWTGYDKGAHLFLPSY 829
+ + R+YGVIECDPLVR+GLEK+ R+ V+PYMPMLVPPL W+GYDKGA+LFL SY
Sbjct: 423 VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSY 482
Query: 830 VMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWRVNKRVLSIIDRIWASGGRLADL 889
+M+ HGAKQQREA+K PK QL+PVFEALDTLG TKWRVNKRVL+++DRIW+SGG +AD+
Sbjct: 483 IMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADM 542
Query: 890 VDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERHSQRCDIELKLAVARKMKEEEGF 949
VDR D PLPE+P EDE ++KWKW++K+AKK NSERHSQRCD ELKL+VARKMK+EE F
Sbjct: 543 VDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAF 602
Query: 950 YYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVD 1009
YYPHN+DFRGRAYPM PHLNHLGSD+CRG+LEFAEGRP+G SGLRWLKIHLANLYAGGVD
Sbjct: 603 YYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVD 662
Query: 1010 KLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDPFQCLAVCINLSEALRSSSPETT 1069
KLS R++FTENHLD+IFDSADRPLEG+RWWL AEDPFQCLAVCI+L+EALRS SPET
Sbjct: 663 KLSLDGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETV 722
Query: 1070 LSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRSDAEK 1129
LSH+P+HQDGSCNGLQHYAALGRD LGA AVNLVAG+KPADVYSGIA RVLDIMR DA++
Sbjct: 723 LSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADR 782
Query: 1130 DPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMGARDQIKKRLKERASIADDSQLF 1189
DP P AL AR L+NQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER+ D+ ++F
Sbjct: 783 DPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVF 842
Query: 1190 AASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLG 1249
A+CYAA+ TL A+ EMF+AAR+IM W GECAK+IASEN+ VRWTTPLGLPVVQPY Q+G
Sbjct: 843 GAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMG 902
Query: 1250 RHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLDGSHMMMTAVACRRAGLNFAGVH 1309
L+KTSLQ L+LQ ETD+V+ RQ+TAFPPNF+HSLDGSHMMMTAVAC+RAG+ FAGVH
Sbjct: 903 TKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGVCFAGVH 962
Query: 1310 DSYWTHACDVDVMNRLLREKFVELYEAPILENLLKTFQKSFPSLKFPPLPDRGDFDLK 1357
DS+WTHACDVD +N +LREKFVELY PILENLL++F++SFP L FPPLP+RGD DLK
Sbjct: 963 DSFWTHACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGDLDLK 1001
BLAST of Csor.00g303460 vs. TAIR 10
Match:
AT2G24120.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1114.0 bits (2880), Expect = 0.0e+00
Identity = 557/925 (60.22%), Postives = 698/925 (75.46%), Query Frame = 0
Query: 455 SDPVAFYGVL-----NHANGYATAAEAAISEEDLSGSEEIQEL--MEELSKQDK--VESH 514
S+ V F+G L N + YA + A E+L E L L QD + +
Sbjct: 75 SNSVHFHGNLIESFENQDSSYAGTIKGASLIEELENPVERNGLSGRRRLFMQDPPWISAL 134
Query: 515 FQQP-KKMVD--------GVGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLA 574
F + KMVD + K++ LR+RQ+K ETEAWE EY++L +MCE+ LA
Sbjct: 135 FLKGLSKMVDQTLKIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLA 194
Query: 575 PNLPYIKSLFLGWFEPLRDAIAADQEFCKKKS---RVSHAPYFDLLPADMMAVITMHKLM 634
PNLPY+K +FLGWF+PL+D I +Q+ K KS R ++AP+ +LLPAD MAVI MHK+M
Sbjct: 195 PNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMM 254
Query: 635 GLLMTSSGGSSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVEDQ 694
GL+M S ++VVQAA IG AIE EVRIH F + T+K + D
Sbjct: 255 GLVM-SGHEDGCIQVVQAAVSIGIAIEQEVRIHNFLKRTRKNNAG-------------DS 314
Query: 695 KKLAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAY 754
++ KE+ LRK+V +L++++++ +VK + KPWG+ K+G RL++LLIE AY
Sbjct: 315 QEELKEKQLLRKRVNSLIRRKRIIDALKVVKS-EGTKPWGRATQAKLGSRLLELLIEAAY 374
Query: 755 IQPPMDQLGGGPPDIRPAFVHTLKTITT-EVQKTSRRYGVIECDPLVRRGLEKTARHIVI 814
+QPP+ Q G P+ RPAF H KT+T K RRYGVIECD L+ GL+K+A+H++I
Sbjct: 375 VQPPLTQSGDSIPEFRPAFRHRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLI 434
Query: 815 PYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGR 874
PY+PMLVPP W GYDKG +LFLPSY+MR HG+K+Q++A+K + K VFEALDTLG
Sbjct: 435 PYVPMLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGN 494
Query: 875 TKWRVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKEN 934
TKWRVN+ +L +++R+WA GG +A LV+RED P+PE+P+ ED EE++ WKW + A K N
Sbjct: 495 TKWRVNRNILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKIN 554
Query: 935 SERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFA 994
ERHS RCD+ELKL+VARKMK+EEGFYYPHNLDFRGRAYPMHPHLNHL SD+CRG LEFA
Sbjct: 555 RERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFA 614
Query: 995 EGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLG 1054
EGRPLG+SGL WLKIHLANLYAGGV+KLS+ R++F ENHLD+I DSA+ P+ G RWWL
Sbjct: 615 EGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLK 674
Query: 1055 AEDPFQCLAVCINLSEALRSSSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLV 1114
AEDPFQCLA C+ L++AL+S SP + +SH+P+HQDGSCNGLQHYAALGRD AAAVNLV
Sbjct: 675 AEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLV 734
Query: 1115 AGDKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGV 1174
AG+KPADVYS I+ RV +IM+ D+ KDP +NP A A++LI QVDRKLVKQTVMTSVYGV
Sbjct: 735 AGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGV 794
Query: 1175 TYMGARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKV 1234
TY+GAR+QIK+RL+E+ I D+ LFAA+CY+A+ TL ALGE+FEAAR+IMSWLG+CAK+
Sbjct: 795 TYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKI 854
Query: 1235 IASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFV 1294
IAS+N PVRW TPLGLPVVQPY + RHLI+TSLQVLALQRE + V +Q+TAFPPNFV
Sbjct: 855 IASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFV 914
Query: 1295 HSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLL 1354
HSLDG+HMMMTAVACR AGLNFAGVHDSYWTHACDVD MNR+LREKFVELY PILE+LL
Sbjct: 915 HSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLL 974
Query: 1355 KTFQKSFPSLKFPPLPDRGDFDLKD 1358
++FQ+S+P+L FPP+P RGDFDLK+
Sbjct: 975 QSFQESYPNLVFPPVPKRGDFDLKE 984
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8L6J5 | 0.0e+00 | 77.80 | DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RP... | [more] |
Q93Y94 | 0.0e+00 | 77.03 | DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=... | [more] |
Q8VWF8 | 0.0e+00 | 68.66 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestr... | [more] |
Q8L6J3 | 0.0e+00 | 68.69 | DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum... | [more] |
P92969 | 0.0e+00 | 66.46 | DNA-directed RNA polymerase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=... | [more] |
Match Name | E-value | Identity | Description | |
KAG6574029.1 | 0.0 | 100.00 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita a... | [more] |
XP_022944908.1 | 0.0 | 98.56 | DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita moschata] | [more] |
XP_023542839.1 | 0.0 | 97.53 | DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita pepo subsp. pepo] | [more] |
KAG6574025.1 | 0.0 | 96.92 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita a... | [more] |
XP_023542836.1 | 0.0 | 96.82 | DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita pepo subsp. pepo] ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FZC4 | 0.0 | 98.56 | DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449299 PE=3 S... | [more] |
A0A6J1FZD9 | 0.0 | 96.72 | DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449300 PE=3 S... | [more] |
A0A6J1HS83 | 0.0 | 95.07 | DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111467347 PE=3 SV=... | [more] |
A0A6J1D747 | 0.0 | 87.46 | DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111017540 PE=3 ... | [more] |
A0A5E4F8X8 | 0.0 | 78.03 | DNA-directed RNA polymerase OS=Prunus dulcis OX=3755 GN=ALMOND_2B020531 PE=3 SV=... | [more] |