
Csor.00g303260 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAATGTGATTGATCAAGATCAACAGTGGCTTCTCAATTGCTTGTCCGCCACTCTTGACCCCAACCAGGAGGTTCGCTCATTCGCTGAAACCTCGCTAAATCAGGCATCTCTCCAACCAGGTTCTTGCCGTCACCGTAATTCTCAGCTAATTGTTATCTGTACTATCGAGTGTCTTCCCATATGGAATCATTTTTCTATGTTACCCGAACAGTAAATGAATCGCATTCCCGCCTCGTTGGCGTGGATATGCGATTGTGTTAGGCAGGATTGATATGTCATATACATACGTTTCTGTACTGTAGGAAGATCAGGAACAGATTAAGTTTTCTGGTTCGTTCTGTCTTTCACTATCTGATTAACTTATTCTACTACTGGATTTAATTGTGATACTTCATTCATCTTAAAGGTTTTGGGGTTGCATTATCCAAAGTCACTGCGAACAGGGAGCTGCCAGTAGGATTGCGCCAGATATCCTTTGTTGTCGTTGCAATTGAGATTCTTAATTTTTCTGCGTGA ATGGCCAATGTGATTGATCAAGATCAACAGTGGCTTCTCAATTGCTTGTCCGCCACTCTTGACCCCAACCAGGAGGTTCGCTCATTCGCTGAAACCTCGCTAAATCAGGCATCTCTCCAACCAGGTTTTGGGGTTGCATTATCCAAAGTCACTGCGAACAGGGAGCTGCCAGTAGGATTGCGCCAGATATCCTTTGTTGTCGTTGCAATTGAGATTCTTAATTTTTCTGCGTGA ATGGCCAATGTGATTGATCAAGATCAACAGTGGCTTCTCAATTGCTTGTCCGCCACTCTTGACCCCAACCAGGAGGTTCGCTCATTCGCTGAAACCTCGCTAAATCAGGCATCTCTCCAACCAGGTTTTGGGGTTGCATTATCCAAAGTCACTGCGAACAGGGAGCTGCCAGTAGGATTGCGCCAGATATCCTTTGTTGTCGTTGCAATTGAGATTCTTAATTTTTCTGCGTGA MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIEILNFSA Homology
BLAST of Csor.00g303260 vs. NCBI nr
Match: KAG6574009.1 (hypothetical protein SDJN03_27896, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150 bits (378), Expect = 1.89e-45 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Csor.00g303260 vs. NCBI nr
Match: KAG6601339.1 (Importin-9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 133 bits (334), Expect = 5.72e-34 Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 0
BLAST of Csor.00g303260 vs. NCBI nr
Match: KAF3950435.1 (hypothetical protein CMV_023812, partial [Castanea mollissima]) HSP 1 Score: 117 bits (294), Expect = 1.96e-32 Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0
BLAST of Csor.00g303260 vs. NCBI nr
Match: TYK09061.1 (importin-9 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 126 bits (317), Expect = 1.13e-31 Identity = 62/71 (87.32%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Csor.00g303260 vs. NCBI nr
Match: KAG7032125.1 (Importin-9, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 121 bits (303), Expect = 3.92e-31 Identity = 69/101 (68.32%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of Csor.00g303260 vs. ExPASy TrEMBL
Match: A0A5D3CB26 (Importin-9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00500 PE=4 SV=1) HSP 1 Score: 126 bits (317), Expect = 5.45e-32 Identity = 62/71 (87.32%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Csor.00g303260 vs. ExPASy TrEMBL
Match: A0A1S3BFX2 (importin-9 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489226 PE=4 SV=1) HSP 1 Score: 120 bits (301), Expect = 7.85e-30 Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of Csor.00g303260 vs. ExPASy TrEMBL
Match: A0A0A0KQZ8 (Importin N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608130 PE=4 SV=1) HSP 1 Score: 120 bits (301), Expect = 7.88e-30 Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of Csor.00g303260 vs. ExPASy TrEMBL
Match: A0A1S3BF85 (importin-9 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489226 PE=4 SV=1) HSP 1 Score: 120 bits (301), Expect = 7.88e-30 Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of Csor.00g303260 vs. ExPASy TrEMBL
Match: A0A6J1D5R8 (importin-9 OS=Momordica charantia OX=3673 GN=LOC111017537 PE=4 SV=1) HSP 1 Score: 120 bits (300), Expect = 1.08e-29 Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of Csor.00g303260 vs. TAIR 10
Match: AT1G26170.1 (ARM repeat superfamily protein ) HSP 1 Score: 101.3 bits (251), Expect = 3.6e-22 Identity = 48/65 (73.85%), Postives = 58/65 (89.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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