Csor.00g302750 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g302750
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Translocase subunit seca
Location	Csor_Chr18: 11379431 .. 11380177 (+)
RNA-Seq Expression	Csor.00g302750
Synteny	Csor.00g302750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCACTGCGGCATTCTGTCGAACACCTTCTCGGGTCACGACGAGGAGATGAGGACCTCTGTTCCGCGTCCCGTTTCAGACGTTAGAGATCATATTGTTTGCCCTAAACCACGGCGTCTTAGTAATCTACAGGTCGCCGTCAACGGCCACGCCGATAGCTTTTTCCGGTGGAATGTTTGGTTAGTTTTCTGATTCTTATCGTGATTTTACAAAAGAAGAACCCTTGGAAATGCCTCCCTTTTGCTAATTCTTTCTTGAACTGAATTTCAGTCACCAAGTTGAGCAAATTGACATGGCAGCCGGACCGGATCTGCTTGACTTCCTGCTGAAAAAGGTATGCTATGCTCTTATCTCTTTTCATTTTTCGTTTCTTCAGATCATAAGAGATGAATATCGGAATTTAGAGGAGGCCCTGGTAGCTTAAGTTGTTGAATTTTATAGGATTGTCGCAGCGTGGATCAATCGTTTACGCAGTTGGCTTCGACGCCCCCTTTTTTACGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGACCGTTTCGGGGATGAAAATTTCATCCCCTTTTCACCGATCGCTTCACCGTCAGGTCAGTTGTCGCCCCCTACAGCAACCTCCAGGAAGGGAGGCGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTGGACAGGGATAGGCAAAATTGCAGCATCCCTGCCTTCGCTTAG

mRNA sequence

ATGAATCACTGCGGCATTCTGTCGAACACCTTCTCGGGTCACGACGAGGAGATGAGGACCTCTGTTCCGCGTCCCGTTTCAGACGTTAGAGATCATATTGTTTGCCCTAAACCACGGCGTCTTAGTAATCTACAGGTCGCCGTCAACGGCCACGCCGATAGCTTTTTCCGGTGGAATGTTTGTCACCAAGTTGAGCAAATTGACATGGCAGCCGGACCGGATCTGCTTGACTTCCTGCTGAAAAAGGATTGTCGCAGCGTGGATCAATCGTTTACGCAGTTGGCTTCGACGCCCCCTTTTTTACGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGACCGTTTCGGGGATGAAAATTTCATCCCCTTTTCACCGATCGCTTCACCGTCAGGTCAGTTGTCGCCCCCTACAGCAACCTCCAGGAAGGGAGGCGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTGGACAGGGATAGGCAAAATTGCAGCATCCCTGCCTTCGCTTAG

Coding sequence (CDS)

ATGAATCACTGCGGCATTCTGTCGAACACCTTCTCGGGTCACGACGAGGAGATGAGGACCTCTGTTCCGCGTCCCGTTTCAGACGTTAGAGATCATATTGTTTGCCCTAAACCACGGCGTCTTAGTAATCTACAGGTCGCCGTCAACGGCCACGCCGATAGCTTTTTCCGGTGGAATGTTTGTCACCAAGTTGAGCAAATTGACATGGCAGCCGGACCGGATCTGCTTGACTTCCTGCTGAAAAAGGATTGTCGCAGCGTGGATCAATCGTTTACGCAGTTGGCTTCGACGCCCCCTTTTTTACGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGACCGTTTCGGGGATGAAAATTTCATCCCCTTTTCACCGATCGCTTCACCGTCAGGTCAGTTGTCGCCCCCTACAGCAACCTCCAGGAAGGGAGGCGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTGGACAGGGATAGGCAAAATTGCAGCATCCCTGCCTTCGCTTAG

Protein sequence

MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNVCHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFGDENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA

Homology

[Close]

BLAST of Csor.00g302750 vs. NCBI nr
Match: XP_022945871.1 (uncharacterized protein LOC111449982 [Cucurbita moschata] >XP_022945872.1 uncharacterized protein LOC111449982 [Cucurbita moschata] >XP_022945873.1 uncharacterized protein LOC111449982 [Cucurbita moschata] >XP_023542945.1 uncharacterized protein LOC111802711 [Cucurbita pepo subsp. pepo] >XP_023542946.1 uncharacterized protein LOC111802711 [Cucurbita pepo subsp. pepo] >KAG6573958.1 hypothetical protein SDJN03_27845, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015488.1 hypothetical protein SDJN02_23124 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382 bits (981), Expect = 4.79e-134
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV
Sbjct: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA
Sbjct: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180

Query: 181 FA 182
           FA
Sbjct: 181 FA 182

[Close]

BLAST of Csor.00g302750 vs. NCBI nr
Match: XP_022968461.1 (uncharacterized protein LOC111467698 [Cucurbita maxima] >XP_022968462.1 uncharacterized protein LOC111467698 [Cucurbita maxima])

HSP 1 Score: 379 bits (974), Expect = 5.60e-133
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV
Sbjct: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DENFIPFSPIASPSGQLSPPTATSRKGGG VRASFGNKPTVRIEGFDCLDRDRQNCSIPA
Sbjct: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180

Query: 181 FA 182
           FA
Sbjct: 181 FA 182

[Close]

BLAST of Csor.00g302750 vs. NCBI nr
Match: XP_022150691.1 (uncharacterized protein LOC111018762 [Momordica charantia])

HSP 1 Score: 304 bits (779), Expect = 2.81e-103
Identity = 155/183 (84.70%), Postives = 164/183 (89.62%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC ILSNTFSGH EEMRTSVP P+SD+RD IVCPKPRRLSNL+V VNGHAD+  RWN+
Sbjct: 1   MNHCAILSNTFSGH-EEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNL 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLL K+  SVDQSFTQLAS+PPFL GSPPSRVANPLIQD RFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLTKNGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DENFIPFSPIA-SPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIP 180
           DE FIPF+PIA SPS QLSP TA SRKGG RVRA+FGNKP VRIEGFDCLDRDRQNCSIP
Sbjct: 121 DEKFIPFAPIAASPSVQLSPSTA-SRKGG-RVRANFGNKPAVRIEGFDCLDRDRQNCSIP 180

Query: 181 AFA 182
           AFA
Sbjct: 181 AFA 180

[Close]

BLAST of Csor.00g302750 vs. NCBI nr
Match: XP_038893407.1 (uncharacterized protein LOC120082204 [Benincasa hispida])

HSP 1 Score: 303 bits (775), Expect = 1.14e-102
Identity = 151/183 (82.51%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSN-LQVAVNGHADSFFRWN 60
           MNHC ILSN FSGH EEMRTS+P P+SD+RD +VCPKPRRL+N L VAVNGHAD+  RWN
Sbjct: 1   MNHCAILSNAFSGH-EEMRTSLPCPISDLRDQLVCPKPRRLTNHLNVAVNGHADTSLRWN 60

Query: 61  VCHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRF 120
           + HQVEQIDMAAGPDLLDFLL K  RSVDQSFTQLAS+PPFL GSPPSRVANPLIQD RF
Sbjct: 61  LSHQVEQIDMAAGPDLLDFLLTKGGRSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF 120

Query: 121 GDENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIP 180
           G+E FIPF+PIASPSGQLSP  +TS + GGRVRASFGNKPTVRIEGFDCLDRDRQNCSIP
Sbjct: 121 GEEKFIPFAPIASPSGQLSP--STSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIP 180

Query: 181 AFA 182
           AFA
Sbjct: 181 AFA 180

[Close]

BLAST of Csor.00g302750 vs. NCBI nr
Match: XP_022957437.1 (uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothetical protein SDJN02_06117 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292 bits (747), Expect = 2.04e-98
Identity = 148/182 (81.32%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC ILSN FS H EEMR  VP P+SD+RD +VCPKPRRLSN +V V GHADS  RWN+
Sbjct: 1   MNHCAILSNAFSSH-EEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
            HQVEQIDMA GPDLLDFLL +   SVDQSFTQLAS+PPFL GSPPSRVANPLIQD RFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DE FIPF+PIASPSGQLSP TA SRKGG RVRASFGNKPTVRIEGFDC DRDRQNCSIPA
Sbjct: 121 DEKFIPFAPIASPSGQLSPSTA-SRKGG-RVRASFGNKPTVRIEGFDCRDRDRQNCSIPA 179

Query: 181 FA 182
           FA
Sbjct: 181 FA 179

[Close]

BLAST of Csor.00g302750 vs. ExPASy TrEMBL
Match: A0A6J1G278 (uncharacterized protein LOC111449982 OS=Cucurbita moschata OX=3662 GN=LOC111449982 PE=4 SV=1)

HSP 1 Score: 382 bits (981), Expect = 2.32e-134
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV
Sbjct: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA
Sbjct: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180

Query: 181 FA 182
           FA
Sbjct: 181 FA 182

[Close]

BLAST of Csor.00g302750 vs. ExPASy TrEMBL
Match: A0A6J1HUX4 (uncharacterized protein LOC111467698 OS=Cucurbita maxima OX=3661 GN=LOC111467698 PE=4 SV=1)

HSP 1 Score: 379 bits (974), Expect = 2.71e-133
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV
Sbjct: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DENFIPFSPIASPSGQLSPPTATSRKGGG VRASFGNKPTVRIEGFDCLDRDRQNCSIPA
Sbjct: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180

Query: 181 FA 182
           FA
Sbjct: 181 FA 182

[Close]

BLAST of Csor.00g302750 vs. ExPASy TrEMBL
Match: A0A6J1DC97 (uncharacterized protein LOC111018762 OS=Momordica charantia OX=3673 GN=LOC111018762 PE=4 SV=1)

HSP 1 Score: 304 bits (779), Expect = 1.36e-103
Identity = 155/183 (84.70%), Postives = 164/183 (89.62%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC ILSNTFSGH EEMRTSVP P+SD+RD IVCPKPRRLSNL+V VNGHAD+  RWN+
Sbjct: 1   MNHCAILSNTFSGH-EEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNL 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLL K+  SVDQSFTQLAS+PPFL GSPPSRVANPLIQD RFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLTKNGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DENFIPFSPIA-SPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIP 180
           DE FIPF+PIA SPS QLSP TA SRKGG RVRA+FGNKP VRIEGFDCLDRDRQNCSIP
Sbjct: 121 DEKFIPFAPIAASPSVQLSPSTA-SRKGG-RVRANFGNKPAVRIEGFDCLDRDRQNCSIP 180

Query: 181 AFA 182
           AFA
Sbjct: 181 AFA 180

[Close]

BLAST of Csor.00g302750 vs. ExPASy TrEMBL
Match: A0A6J1GZ47 (uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC111458833 PE=4 SV=1)

HSP 1 Score: 292 bits (747), Expect = 9.88e-99
Identity = 148/182 (81.32%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC ILSN FS H EEMR  VP P+SD+RD +VCPKPRRLSN +V V GHADS  RWN+
Sbjct: 1   MNHCAILSNAFSSH-EEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
            HQVEQIDMA GPDLLDFLL +   SVDQSFTQLAS+PPFL GSPPSRVANPLIQD RFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DE FIPF+PIASPSGQLSP TA SRKGG RVRASFGNKPTVRIEGFDC DRDRQNCSIPA
Sbjct: 121 DEKFIPFAPIASPSGQLSPSTA-SRKGG-RVRASFGNKPTVRIEGFDCRDRDRQNCSIPA 179

Query: 181 FA 182
           FA
Sbjct: 181 FA 179

[Close]

BLAST of Csor.00g302750 vs. ExPASy TrEMBL
Match: A0A6J1JI50 (uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540 PE=4 SV=1)

HSP 1 Score: 289 bits (740), Expect = 1.15e-97
Identity = 147/182 (80.77%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC ILSN FS H EEMR  VP P+SD+RD +VCPKPRRLSN +V V GHADS  RWN+
Sbjct: 1   MNHCAILSNAFSSH-EEMRDPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
            HQVEQIDMA GPDLLDFLL +   SVDQSFTQLAS+PPFL GSPPSRVANPLIQD RFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DE FIP +PIASPSGQLSP TA SRKGG RVRASFGNKPTVRIEGFDC DRDRQNCSIPA
Sbjct: 121 DEKFIPLAPIASPSGQLSPSTA-SRKGG-RVRASFGNKPTVRIEGFDCRDRDRQNCSIPA 179

Query: 181 FA 182
           FA
Sbjct: 181 FA 179

[Close]

BLAST of Csor.00g302750 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.1 bits (357), Expect = 4.3e-34
Identity = 83/187 (44.39%), Postives = 107/187 (57.22%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNH  +  N F+    ++R+S    V   +  +VCPKPRR+       + H     R   
Sbjct: 1   MNHFAVQPNAFAA-GGDLRSSSVSVVERDQTTVVCPKPRRIGLRN--NHHHPSRSLRCYF 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTP-PFLRGSPPSRVANPLIQDDRF 120
            HQ+E  +  A  D+LD +L KD    +Q   Q+  +P PFL GSPPSRVANPL QD RF
Sbjct: 61  SHQLELCESKAETDILDIILTKDGYGAEQVNKQVIDSPSPFLCGSPPSRVANPLTQDARF 120

Query: 121 GDENFIPFSPIASPSGQL----SPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQN 180
            DE  +  S +  P   L    SP +++ RKGG  VR +FGN P VR+EGFDCLDRD +N
Sbjct: 121 RDE-IVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDCLDRDSRN 180

Query: 181 CSIPAFA 183
           CSIPA A
Sbjct: 181 CSIPALA 183

[Close]

BLAST of Csor.00g302750 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 84/183 (45.90%), Postives = 99/183 (54.10%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC +  N F    EE R  VP   S   D +VCPKPRR +N+      H       +V
Sbjct: 1   MNHCSLQQNAFLSR-EESRGFVP-IYSHPVDSVVCPKPRRANNVIRPFRLHFSLSGADDV 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           C      D  AG DLLD   +K+  S        + +PPF  GSPPSR ANPL QD RFG
Sbjct: 61  C------DSKAGEDLLDIFRRKESVS--------SRSPPFFLGSPPSRAANPLAQDARFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKP-TVRIEGFDCLDRDRQNCSIP 180
           DE     SP  SP   L P  +  + G GR++  FG KP TVR+EGFDCL+RDR N SIP
Sbjct: 121 DEKLNTVSPSLSP---LLPSASRVKSGCGRMK--FGVKPATVRVEGFDCLNRDRPNSSIP 162

Query: 181 AFA 183
           A A
Sbjct: 181 AMA 162

[Close]

BLAST of Csor.00g302750 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 80/186 (43.01%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MN CGI  N F    EEMR +    VSD RD ++CPKPRR+     A+N H+    RW +
Sbjct: 2   MNSCGIQQNAF----EEMRRNA--AVSDRRDAVICPKPRRVG----ALNHHSSRSLRWQL 61

Query: 61  CHQVEQIDMAAGPDLLDFLLKK-DCRSVDQSFTQLASTPP-FLRGSPPSRVANPLIQDDR 120
            HQ+E  +  +G ++LDF+L K      +Q  T+   TPP F  GSPPSRV+NPL +D  
Sbjct: 62  NHQMELCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSL 121

Query: 121 FGDENFIPFSPIASPSGQLSPPTATSRKGGGRVRA--SFGNKPTVRIEGFDCLDRDRQNC 180
           F +E  +  SP  S      P   +S + G  V A  SFGN P VR+ GFDC DR   N 
Sbjct: 122 FREELLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNR 176

Query: 181 SIPAFA 183
           SI   A
Sbjct: 182 SISTLA 176

[Close]

BLAST of Csor.00g302750 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 80/186 (43.01%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MN CGI  N F    EEMR +    VSD RD ++CPKPRR+     A+N H+    RW +
Sbjct: 2   MNSCGIQQNAF----EEMRRNA--AVSDRRDAVICPKPRRVG----ALNHHSSRSLRWQL 61

Query: 61  CHQVEQIDMAAGPDLLDFLLKK-DCRSVDQSFTQLASTPP-FLRGSPPSRVANPLIQDDR 120
            HQ+E  +  +G ++LDF+L K      +Q  T+   TPP F  GSPPSRV+NPL +D  
Sbjct: 62  NHQMELCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSL 121

Query: 121 FGDENFIPFSPIASPSGQLSPPTATSRKGGGRVRA--SFGNKPTVRIEGFDCLDRDRQNC 180
           F +E  +  SP  S      P   +S + G  V A  SFGN P VR+ GFDC DR   N 
Sbjct: 122 FREELLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNR 176

Query: 181 SIPAFA 183
           SI   A
Sbjct: 182 SISTLA 176

[Close]

BLAST of Csor.00g302750 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 7.2e-29
Identity = 82/195 (42.05%), Postives = 106/195 (54.36%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC +  N F   +E M         D +D +VCPKPRR+  L       A++  R   
Sbjct: 67  MNHCNLQQNAFMSREEMMG-------FDRKDLVVCPKPRRVGLL-------ANNVIRPLR 126

Query: 61  CHQ----VEQIDMAAGPDLLDFLLKK-DCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQ 120
            H      +  D  AG +LL+ + +K D  ++ Q    L+S+PP+  GSPPSR ANPL Q
Sbjct: 127 LHMSQAAADLCDSKAGAELLEIIRRKEDNGTIGQ---LLSSSPPYFPGSPPSRAANPLAQ 186

Query: 121 DDRFGDENFIPFSPIA------SPSGQLSPPTATSRKGG-GRVRASFG-NKPTVRIEGFD 180
           D RF DE   P SP +      S +G  SP +++S     G VR  FG N P VR+EGFD
Sbjct: 187 DARFRDEKLNPISPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFD 244

Query: 181 CLDRDRQNCSIPAFA 183
           CL+RDRQN SIPA A
Sbjct: 247 CLNRDRQNSSIPAMA 244

The following BLAST results are available for this feature:

BLAST of Csor.00g302750 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g302750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945871.1	4.79e-134	100.00	uncharacterized protein LOC111449982 [Cucurbita moschata] >XP_022945872.1 unchar...	[more]
XP_022968461.1	5.60e-133	99.45	uncharacterized protein LOC111467698 [Cucurbita maxima] >XP_022968462.1 uncharac...	[more]
XP_022150691.1	2.81e-103	84.70	uncharacterized protein LOC111018762 [Momordica charantia]	[more]
XP_038893407.1	1.14e-102	82.51	uncharacterized protein LOC120082204 [Benincasa hispida]	[more]
XP_022957437.1	2.04e-98	81.32	uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothet...	[more]

BLAST of Csor.00g302750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G278	2.32e-134	100.00	uncharacterized protein LOC111449982 OS=Cucurbita moschata OX=3662 GN=LOC1114499...	[more]
A0A6J1HUX4	2.71e-133	99.45	uncharacterized protein LOC111467698 OS=Cucurbita maxima OX=3661 GN=LOC111467698...	[more]
A0A6J1DC97	1.36e-103	84.70	uncharacterized protein LOC111018762 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1GZ47	9.88e-99	81.32	uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC1114588...	[more]
A0A6J1JI50	1.15e-97	80.77	uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540...	[more]

BLAST of Csor.00g302750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	4.3e-34	44.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02555.1	2.2e-30	45.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.1	3.8e-30	43.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	3.8e-30	43.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G16110.1	7.2e-29	42.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..154
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 1..182
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g302750.m01	Csor.00g302750.m01	mRNA