Csor.00g300380 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCAACCTCTCACAGATATGACTCATCTTTGGTTCATTCTGACATGATCTCAACACCATTGAAGCTGGCTGGCAGACAACTTATTCAATGTTCAAATACACATAAATTTCAATTCTATGGCAAACTTTTATCCACAGGTTAGCCTGGAGCTGTATGGAGACAACAATCAACGACTCTTCACTTATTGGACTGTACGAACATTAAAACACAAAAATTAGCAACAAAATCAGATTGAAAATGAAATGACGGCAACTTTTTGAATGAACAGTCGGACGCATATCAAGTAACAGGTTGCTACAATTTACTTTGTTCAGGCTTTGTTCAAACCAACAGTAGAATCGCCATTAGAGTTGCATTTCTCCAACTTCCTCCTACAATGGCGGCCAATTCAACATTAGTTTACTGGTTTGGAAGGTAACCCATTTCAATTTCATGTTTTTTCTTGAAGATTGTGAGTCCAAATTGAATTGGAGTTTTTGTTCAAAGGTTCCGAAGCATGGGAACTGGTGGTTGGAATTTGGGTCGGGTGTGTTGGCCGGGTACTAGCAAGCGATTTTGTTCACTCACCTTGATACAGTTTGGTGGAGAGGTGGTGAATTCGAGAGTGTCGGGATTTCACATGGCGAAAGAAATGGGCAGTGGGCATTTAGCTGGTGAACGGTTCCGAAAAGCTTCTTATTTTCGTAATCTAAAGGTTGTGAAATGGGATAACACTTTTAAAGGTTTTGGCAGATCATCCAAATTGCTATAA ATGAGTTCAACCTCTCACAGATATGACTCATCTTTGGTTCATTCTGACATGATCTCAACACCATTGAAGCTGGCTGGCAGACAACTTATTCAATGTTCAAATACACATAAATTTCAATTCTATGGCAAACTTTTATCCACAGGCTTTGTTCAAACCAACAGTAGAATCGCCATTAGAGTTGCATTTCTCCAACTTCCTCCTACAATGGCGGCCAATTCAACATTAGTTTACTGGTTTGGAAGGTTCCGAAGCATGGGAACTGGTGGTTGGAATTTGGGTCGGGTGTGTTGGCCGGGTACTAGCAAGCGATTTTGTTCACTCACCTTGATACAGTTTGGTGGAGAGGTGGTGAATTCGAGAGTGTCGGGATTTCACATGGCGAAAGAAATGGGCAGTGGGCATTTAGCTGGTGAACGGTTCCGAAAAGCTTCTTATTTTCGTAATCTAAAGGTTGTGAAATGGGATAACACTTTTAAAGGTTTTGGCAGATCATCCAAATTGCTATAA ATGAGTTCAACCTCTCACAGATATGACTCATCTTTGGTTCATTCTGACATGATCTCAACACCATTGAAGCTGGCTGGCAGACAACTTATTCAATGTTCAAATACACATAAATTTCAATTCTATGGCAAACTTTTATCCACAGGCTTTGTTCAAACCAACAGTAGAATCGCCATTAGAGTTGCATTTCTCCAACTTCCTCCTACAATGGCGGCCAATTCAACATTAGTTTACTGGTTTGGAAGGTTCCGAAGCATGGGAACTGGTGGTTGGAATTTGGGTCGGGTGTGTTGGCCGGGTACTAGCAAGCGATTTTGTTCACTCACCTTGATACAGTTTGGTGGAGAGGTGGTGAATTCGAGAGTGTCGGGATTTCACATGGCGAAAGAAATGGGCAGTGGGCATTTAGCTGGTGAACGGTTCCGAAAAGCTTCTTATTTTCGTAATCTAAAGGTTGTGAAATGGGATAACACTTTTAAAGGTTTTGGCAGATCATCCAAATTGCTATAA MSSTSHRYDSSLVHSDMISTPLKLAGRQLIQCSNTHKFQFYGKLLSTGFVQTNSRIAIRVAFLQLPPTMAANSTLVYWFGRFRSMGTGGWNLGRVCWPGTSKRFCSLTLIQFGGEVVNSRVSGFHMAKEMGSGHLAGERFRKASYFRNLKVVKWDNTFKGFGRSSKLL Homology
BLAST of Csor.00g300380 vs. NCBI nr
Match: KAG6573722.1 (hypothetical protein SDJN03_27609, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 344 bits (883), Expect = 1.46e-119 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Csor.00g300380 vs. NCBI nr
Match: KAF2301632.1 (hypothetical protein GH714_028426 [Hevea brasiliensis]) HSP 1 Score: 103 bits (256), Expect = 5.41e-23 Identity = 78/183 (42.62%), Postives = 93/183 (50.82%), Query Frame = 0
BLAST of Csor.00g300380 vs. NCBI nr
Match: KAE8722633.1 (Pyruvate phosphate dikinase, PEP/pyruvate binding domain isoform 1 [Hibiscus syriacus]) HSP 1 Score: 97.4 bits (241), Expect = 9.05e-22 Identity = 64/128 (50.00%), Postives = 77/128 (60.16%), Query Frame = 0
BLAST of Csor.00g300380 vs. NCBI nr
Match: XP_022151755.1 (uncharacterized protein LOC111019661 [Momordica charantia]) HSP 1 Score: 98.2 bits (243), Expect = 2.05e-20 Identity = 67/131 (51.15%), Postives = 78/131 (59.54%), Query Frame = 0
BLAST of Csor.00g300380 vs. NCBI nr
Match: XP_023526008.1 (uncharacterized protein LOC111789612 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 97.4 bits (241), Expect = 3.03e-20 Identity = 66/130 (50.77%), Postives = 77/130 (59.23%), Query Frame = 0
BLAST of Csor.00g300380 vs. ExPASy TrEMBL
Match: A0A6A6LJN7 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_028426 PE=4 SV=1) HSP 1 Score: 103 bits (256), Expect = 2.62e-23 Identity = 78/183 (42.62%), Postives = 93/183 (50.82%), Query Frame = 0
BLAST of Csor.00g300380 vs. ExPASy TrEMBL
Match: A0A6A3C0Y2 (Pyruvate phosphate dikinase, PEP/pyruvate binding domain isoform 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00013808pilonHSYRG00041 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 4.38e-22 Identity = 64/128 (50.00%), Postives = 77/128 (60.16%), Query Frame = 0
BLAST of Csor.00g300380 vs. ExPASy TrEMBL
Match: A0A6J1DC30 (uncharacterized protein LOC111019661 OS=Momordica charantia OX=3673 GN=LOC111019661 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 9.95e-21 Identity = 67/131 (51.15%), Postives = 78/131 (59.54%), Query Frame = 0
BLAST of Csor.00g300380 vs. ExPASy TrEMBL
Match: A0A803PGU0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.34e-20 Identity = 59/122 (48.36%), Postives = 75/122 (61.48%), Query Frame = 0
BLAST of Csor.00g300380 vs. ExPASy TrEMBL
Match: A0A6J1IRB1 (uncharacterized protein LOC111477750 OS=Cucurbita maxima OX=3661 GN=LOC111477750 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.47e-20 Identity = 66/130 (50.77%), Postives = 77/130 (59.23%), Query Frame = 0
BLAST of Csor.00g300380 vs. TAIR 10
Match: AT1G23340.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 85.1 bits (209), Expect = 5.8e-17 Identity = 55/128 (42.97%), Postives = 71/128 (55.47%), Query Frame = 0
BLAST of Csor.00g300380 vs. TAIR 10
Match: AT1G23340.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 85.1 bits (209), Expect = 5.8e-17 Identity = 55/128 (42.97%), Postives = 71/128 (55.47%), Query Frame = 0
BLAST of Csor.00g300380 vs. TAIR 10
Match: AT1G70550.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 84.7 bits (208), Expect = 7.6e-17 Identity = 55/128 (42.97%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of Csor.00g300380 vs. TAIR 10
Match: AT1G70550.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 84.7 bits (208), Expect = 7.6e-17 Identity = 55/128 (42.97%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of Csor.00g300380 vs. TAIR 10
Match: AT5G50150.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16 Identity = 56/126 (44.44%), Postives = 69/126 (54.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|