Csor.00g298840 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g298840
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	BHLH domain-containing protein
Location	Csor_Chr18: 2209733 .. 2212678 (-)
RNA-Seq Expression	Csor.00g298840
Synteny	Csor.00g298840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACAAGTTCATCCATTCTTCATCATCGGCAAAAACGGACCGAAAGATCATAGAGAGGAATAGAAGAGAAGAGATGAAGGCCCTTTTCTCCCACCTCCATTCTCTTGTCCCCAACCAAAGCTCAACGGTTTCATTTTTTTTCTTACTCTCTGTATTTTTATCATGGTTAGATGATGAGAAAATTTGTTTAAATAACTCCGAAAAAGTTTTGAGTTGCTTGTAGGAAGGTGATACGACACTACTTGATCAGCTAGAAAACGCCACAAATTACATAAATCAATTGAAGGAGAACGTGGAGAAATTGAAAGTGAAGAGAGAGAAACTAATGGGATCGGGAGAAAAAAACCTAAGGAGAGGTGAAATTGAAGCAAGATTATTGGTGCAAGTCGATGCTCATCAGGTGGGTTCTTCGTTGGAGTTTCTTTTGATTACTGGGTTTGATTATCATTTGGTTTTAAGACAAATCCTCCAGCTGCTTCAAGAAAATGGAACTCAGATAGTCCATATCAATCAGTCAACGGTTACCGATCTGGTCTTTCACAAGATAATAGCAGAGGTAAGATAATACATCTAATTATTTACATAAATCAATTGTAATGAATAAAAAAAAAATTGAGAATATTTGTGACGACTGAAAACTAGATGGTGGGAGAAGGAACGACCTTTGAAAGCGCTGAAGGTGAAAGGATTTGCAAGATAGTGAAGAAGTTTGTTTCCCAATACAAAGATGACCAATGCACAGGTTAATGTTTTGTTATCTTGAAGATTTGTTTGCCTTCGGGTGAGGATTCAAATTTCTAATCTTTTAAATAAGGAAATGTCTATTTGAGTTTTTTTTTTTTTTTTTTTAGTATTCTTAAAAGTTTTATAGACACAAAATTTAAAATTGGATGGTACGAGAAAAAAAAAAAAACTAAATATTGTACATTATTTTCATTGGAGGTTCGTTATTTATGTTTCTTAAATAAGGGGTTCGTATTCATCGAGTTATACCATCCTCGGGGCTCTACCCGATTTCTGAGATTATGTCTCAGCGCCCTACTCTGCTCTCTTCAAGCTTGTTTTCGATAGTTGTGTTGCCTCGTTCCCCTCCAACCTTACTTGTGTCTCAACTTAGCTTTAATGCATACTCTTCTCAGTGAGTTAGATGATACATCGTCCTCCTCGTTTGCATCATGACATCTGTCTGTGTCTGTTTTCACGTGGCTAGAAAGGTGCCACTTAAAGGTTGTCACCTTTTCTGTCGACATGTGAGAGTCACAATCTACTCTCTTCTTAATGAGATCGTGACACCACACTTGAATCAAATTTTTACGGGACTCTATCCTCATAAATTAAATAGACATTTCGCTTATAGATCTTATAATGTATATTGCTATTATGGCTAACAAGTAGAGTGCAGCGGAAAGGACAAAGCTTTGGCAAAAACGCATACGTCTAGGATACCCCCACCACTTGTAACTTGCATTTGGTAGCTGATTCTTAGAGATAAATCTGTGATTGTGATGTAAAGCCCATGTCTTTATAGGTTTGGTCAAGAATCAAAGAGTTGGGTTAAAAGCACTTTTCATATCCAATTTAGTAGTGCATTTGCACATTATTCTCATAAAATTGGAGTGATGGCCAATCAAATTTTTAAAAAAATTAATTTAAATAAGTAATTTTTTTTAGTGAAATATTTGATATGGAGTATTAGAAAAGGGTTTTAAGGTGTTTTAACTTTGAATCCTCGTGACCAAAATTTTCTTTAGGTAACCGTCTAATGTTTTAGAGGTCTAGAATTGCTAATATATGCACTTAGTATTTTAAGAAATATTCAATAAATGACCTTACTATTGGGGTCAGGGAATGCAAACACATGCAATCATGAATAGGGACCAATCATTTAAAACACGATAGTCCTTAGGTGGCCTCTAGTTTGGACAACTTAAATGTGTAATACTTCTCTACACATGACCTATAGGTGTGAACGAGGGCCCACCAGGCAGGCTCGCACACCCCTTGGGTCTACATGGTTGGGCTAGTTAGATGAAGTCGGACGTCCTGAGGTACAACGACCTTGTGTATTATGTCAAGCATGATACTCGTCGTCATTGTCATAGTGTATGCGTCCGTACTCATCATAAAAGGGAAAATATACGGATATAACTGAACATACAATATACATGAGGTCCCTATACTTTTCATCTTAATCATTCATGCGGCACAACTCTACACATTCTTCACATATTACCCTAAGTAACATTGCATAAACTTTCATGCATTCATCATTCATAACATTACTCAGGAGATGTGCATCAAAAAAACTTTTTATTCAGGAGATGTGCATCAAAAAAATTTTTATTGTCATACCTGTCGTAGCATGTTATATTATGGTGTTTAACTCAAAACCCTTTTCGATTCTTTAAGATTACAAAAATGAGCAAAATACTCACACCGTCCTCAAATGTCTCTAATCTTTCCTTCTCTTCTACACCTTTACTTCCCCATGGCCGCAACCACTCACCATCACCACACTACTAGTATTAACACTTGTGAGTCAGCTGACGACTATATTTTTAAATTTATTAATAGTATTTAATAGTCGTAATTTTTTTTTTTTATAAATGTTGTGTTATCGTTAGGATCATGATCCTATGCACCCACAACCCGCATAGGCCATTTGGTACTACATGGGTCACACATACAACTAAGTTTCCAACGAGGCTCACTAAGGTGGTCGAGACAAGGAGACATTTCTTTGAATCTTTGTATGGCGATTGGTCTAATTTTTATTGATGTGTACTTCAGGAAAGGAGTAGACATGGCTGCTGCCGACTCAAGCCATGGAAGTTGCAGTGGTGAGCTCTGTGGACCCTCGAGTAAACTACATGAAAGCTGGACATCTTGTTACTTAAGCAGGAAACGCAATGGGCTCACTCAGTTGATCCCACAATTGTAG

mRNA sequence

ATGGCGGACAAGTTCATCCATTCTTCATCATCGGCAAAAACGGACCGAAAGATCATAGAGAGGAATAGAAGAGAAGAGATGAAGGCCCTTTTCTCCCACCTCCATTCTCTTGTCCCCAACCAAAGCTCAACGGAAGGTGATACGACACTACTTGATCAGCTAGAAAACGCCACAAATTACATAAATCAATTGAAGGAGAACGTGGAGAAATTGAAAGTGAAGAGAGAGAAACTAATGGGATCGGGAGAAAAAAACCTAAGGAGAGGTGAAATTGAAGCAAGATTATTGGTGCAAGTCGATGCTCATCAGCTGCTTCAAGAAAATGGAACTCAGATAGTCCATATCAATCAGTCAACGGTTACCGATCTGGTCTTTCACAAGATAATAGCAGAGATGGTGGGAGAAGGAACGACCTTTGAAAGCGCTGAAGGTGAAAGGATTTGCAAGATAGTGAAGAAGAAAGGAGTAGACATGGCTGCTGCCGACTCAAGCCATGGAAGTTGCAGTGGTGAGCTCTGTGGACCCTCGAGTAAACTACATGAAAGCTGGACATCTTGTTACTTAAGCAGGAAACGCAATGGGCTCACTCAGTTGATCCCACAATTGTAG

Coding sequence (CDS)

ATGGCGGACAAGTTCATCCATTCTTCATCATCGGCAAAAACGGACCGAAAGATCATAGAGAGGAATAGAAGAGAAGAGATGAAGGCCCTTTTCTCCCACCTCCATTCTCTTGTCCCCAACCAAAGCTCAACGGAAGGTGATACGACACTACTTGATCAGCTAGAAAACGCCACAAATTACATAAATCAATTGAAGGAGAACGTGGAGAAATTGAAAGTGAAGAGAGAGAAACTAATGGGATCGGGAGAAAAAAACCTAAGGAGAGGTGAAATTGAAGCAAGATTATTGGTGCAAGTCGATGCTCATCAGCTGCTTCAAGAAAATGGAACTCAGATAGTCCATATCAATCAGTCAACGGTTACCGATCTGGTCTTTCACAAGATAATAGCAGAGATGGTGGGAGAAGGAACGACCTTTGAAAGCGCTGAAGGTGAAAGGATTTGCAAGATAGTGAAGAAGAAAGGAGTAGACATGGCTGCTGCCGACTCAAGCCATGGAAGTTGCAGTGGTGAGCTCTGTGGACCCTCGAGTAAACTACATGAAAGCTGGACATCTTGTTACTTAAGCAGGAAACGCAATGGGCTCACTCAGTTGATCCCACAATTGTAG

Protein sequence

MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNYINQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQLLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKIVKKKGVDMAAADSSHGSCSGELCGPSSKLHESWTSCYLSRKRNGLTQLIPQL

Homology

[Close]

BLAST of Csor.00g298840 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.6e-10
Identity = 60/181 (33.15%), Postives = 84/181 (46.41%), Query Frame = 0


Query: 7   HSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNYINQLKE 66
           ++  S   DRK +E+NRR +MK+L+S L SL+P+ SSTE   TL DQL+ A NYI +L+ 
Sbjct: 7   NTGQSRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTE-PLTLPDQLDEAANYIKKLQV 66

Query: 67  NVEKLKVKR---------EKLMGSGEKNL------------------RRGEIEARLLVQV 126
           NVEK + ++         EKL   G  ++                    G I    LV  
Sbjct: 67  NVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTS 126

Query: 127 DAHQ---------LLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKI 152
             H+         L +E G +I H   S V D VFH +  ++        S   ER+ KI
Sbjct: 127 LEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEHDYGARSQIPERLEKI 186

[Close]

BLAST of Csor.00g298840 vs. ExPASy Swiss-Prot
Match: F4I4E1 (Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.0e-04
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = 0


Query: 8   SSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNYINQLKEN 67
           +SSS +  R + E++RR  MK LFS L S V    S      +   ++ AT+Y+ QLKEN
Sbjct: 11  NSSSLREQRNLREKDRRMRMKHLFSILSSHV----SPTRKLPVPHLIDQATSYMIQLKEN 70

Query: 68  VEKLKVKREKLMGSGEKNLRRGE--------------IEARLLV-----QVDAHQLL--- 127
           V  LK K+  L+     NL  G               IE  L++     +V  H+L+   
Sbjct: 71  VNYLKEKKRTLLQGELGNLYEGSFLLPKLSIRSRDSTIEMNLIMDLNMKRVMLHELVSIF 130

Query: 128 QENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFE-SAEGERICKIV 152
           +E G Q++  N   + D   + IIA+ +      + S   ER+ KI+
Sbjct: 131 EEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSRIEERVRKII 173

[Close]

BLAST of Csor.00g298840 vs. NCBI nr
Match: KAG6573269.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389 bits (1000), Expect = 2.80e-136
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60
           MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY
Sbjct: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60

Query: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQLLQENGTQIVHINQSTV 120
           INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQLLQENGTQIVHINQSTV
Sbjct: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQLLQENGTQIVHINQSTV 120

Query: 121 TDLVFHKIIAEMVGEGTTFESAEGERICKIVKKKGVDMAAADSSHGSCSGELCGPSSKLH 180
           TDLVFHKIIAEMVGEGTTFESAEGERICKIVKKKGVDMAAADSSHGSCSGELCGPSSKLH
Sbjct: 121 TDLVFHKIIAEMVGEGTTFESAEGERICKIVKKKGVDMAAADSSHGSCSGELCGPSSKLH 180

Query: 181 ESWTSCYLSRKRNGLTQLIPQL 202
           ESWTSCYLSRKRNGLTQLIPQL
Sbjct: 181 ESWTSCYLSRKRNGLTQLIPQL 202

[Close]

BLAST of Csor.00g298840 vs. NCBI nr
Match: XP_023542777.1 (uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217 bits (552), Expect = 2.92e-68
Identity = 124/177 (70.06%), Postives = 134/177 (75.71%), Query Frame = 0


Query: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60
           MA+ FIH  SSAK DRK+IERNRR EMKALFS LHSLVPNQSSTE +TTLLDQLENATNY
Sbjct: 1   MANNFIHCPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 60

Query: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQ----------------- 120
           I QLKENVEKLK K+EKLM  GE++ RR EI+ARLLVQV+AHQ                 
Sbjct: 61  IKQLKENVEKLKEKKEKLMKLGEESARRSEIKARLLVQVEAHQVGSSLEFLLTTGSEYHL 120

Query: 121 -------LLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKIVKK 153
                  LLQENGTQIV+IN STV D VFHKIIAEMVGEGTT ES EGERIC+ VKK
Sbjct: 121 VLKQILQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESTEGERICETVKK 177

[Close]

BLAST of Csor.00g298840 vs. NCBI nr
Match: KAG6573268.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214 bits (545), Expect = 6.68e-67
Identity = 123/177 (69.49%), Postives = 133/177 (75.14%), Query Frame = 0


Query: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60
           MA+ FIH  SSAK DRK+IERNRR EMKALFS LHSLVPNQSSTE +TTLLDQLENATNY
Sbjct: 22  MANNFIHCPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 81

Query: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQ----------------- 120
           I QLKENVEKLK K+EKLM  GE++ R  EI+ARLLVQV+AHQ                 
Sbjct: 82  IKQLKENVEKLKEKKEKLMKLGEESARSSEIKARLLVQVEAHQVGSSLEFLLTTGSDYHL 141

Query: 121 -------LLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKIVKK 153
                  LLQENGTQIV+IN STV D VFHKIIAEMVGEGTT ES EGERIC+ VKK
Sbjct: 142 VLKQVLQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESIEGERICETVKK 198

[Close]

BLAST of Csor.00g298840 vs. NCBI nr
Match: XP_022955188.1 (uncharacterized protein LOC111457229 [Cucurbita moschata])

HSP 1 Score: 214 bits (544), Expect = 9.47e-67
Identity = 123/177 (69.49%), Postives = 133/177 (75.14%), Query Frame = 0


Query: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60
           MA+ FIHS SSAK DRK+IERNRR EMKALFS LHSLVPNQSS E +TTLLDQLENATNY
Sbjct: 22  MANNFIHSPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSMEAETTLLDQLENATNY 81

Query: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQ----------------- 120
           I QLKENVEKLK K+EKLM  GE++ R  EI+ARLLVQV+AHQ                 
Sbjct: 82  IKQLKENVEKLKEKKEKLMKLGEESARSSEIKARLLVQVEAHQVGSSLEFLLTTRSDYHL 141

Query: 121 -------LLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKIVKK 153
                  LLQENGTQIV+IN STV D VFHKIIAEMVGEGTT ES EGERIC+ VKK
Sbjct: 142 VLKQVLQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESIEGERICETVKK 198

[Close]

BLAST of Csor.00g298840 vs. NCBI nr
Match: XP_022994474.1 (transcription factor bHLH167-like [Cucurbita maxima])

HSP 1 Score: 209 bits (531), Expect = 7.57e-65
Identity = 122/177 (68.93%), Postives = 130/177 (73.45%), Query Frame = 0


Query: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60
           MA+ FIH  SS K DRK+IERNRR EMKALFS LHSLVPNQSSTE +TTLLDQLENATNY
Sbjct: 22  MANNFIHCPSSTKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 81

Query: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQ----------------- 120
           I QLKENVEKLK KREKLMGS     R GE +ARLLVQV+AHQ                 
Sbjct: 82  IKQLKENVEKLKEKREKLMGS-----REGETKARLLVQVEAHQVGSSLEVLLTTGSDYQF 141

Query: 121 -------LLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKIVKK 153
                  LLQENGTQIV+IN STV D VFHKIIAEMVGEGTT ES +GERIC+ VKK
Sbjct: 142 VLNQILQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESTKGERICETVKK 193

[Close]

BLAST of Csor.00g298840 vs. ExPASy TrEMBL
Match: A0A6J1GT92 (uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC111457229 PE=4 SV=1)

HSP 1 Score: 214 bits (544), Expect = 4.58e-67
Identity = 123/177 (69.49%), Postives = 133/177 (75.14%), Query Frame = 0


Query: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60
           MA+ FIHS SSAK DRK+IERNRR EMKALFS LHSLVPNQSS E +TTLLDQLENATNY
Sbjct: 22  MANNFIHSPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSMEAETTLLDQLENATNY 81

Query: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQ----------------- 120
           I QLKENVEKLK K+EKLM  GE++ R  EI+ARLLVQV+AHQ                 
Sbjct: 82  IKQLKENVEKLKEKKEKLMKLGEESARSSEIKARLLVQVEAHQVGSSLEFLLTTRSDYHL 141

Query: 121 -------LLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKIVKK 153
                  LLQENGTQIV+IN STV D VFHKIIAEMVGEGTT ES EGERIC+ VKK
Sbjct: 142 VLKQVLQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESIEGERICETVKK 198

[Close]

BLAST of Csor.00g298840 vs. ExPASy TrEMBL
Match: A0A6J1K2Y3 (transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 3.66e-65
Identity = 122/177 (68.93%), Postives = 130/177 (73.45%), Query Frame = 0


Query: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60
           MA+ FIH  SS K DRK+IERNRR EMKALFS LHSLVPNQSSTE +TTLLDQLENATNY
Sbjct: 22  MANNFIHCPSSTKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 81

Query: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQ----------------- 120
           I QLKENVEKLK KREKLMGS     R GE +ARLLVQV+AHQ                 
Sbjct: 82  IKQLKENVEKLKEKREKLMGS-----REGETKARLLVQVEAHQVGSSLEVLLTTGSDYQF 141

Query: 121 -------LLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKIVKK 153
                  LLQENGTQIV+IN STV D VFHKIIAEMVGEGTT ES +GERIC+ VKK
Sbjct: 142 VLNQILQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESTKGERICETVKK 193

[Close]

BLAST of Csor.00g298840 vs. ExPASy TrEMBL
Match: A0A6J1K483 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 1.30e-62
Identity = 115/177 (64.97%), Postives = 131/177 (74.01%), Query Frame = 0


Query: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60
           MAD FI+  SSAKTD++IIERNRR+EMKAL S LHSLVPNQ+STEG+TTL DQLENATNY
Sbjct: 1   MADNFIYCPSSAKTDQEIIERNRRDEMKALLSQLHSLVPNQNSTEGETTLPDQLENATNY 60

Query: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAH------------------ 120
           I QLKENVEKLK KREKLMG GEK+    E +AR++VQV+AH                  
Sbjct: 61  IKQLKENVEKLKEKREKLMGLGEKSTITSENKARVIVQVEAHLVGSSLEILLTTGSDYHL 120

Query: 121 ------QLLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKIVKK 153
                 QLLQENGT+IV INQSTV +  FHKIIA+M GEGTT E A+GERIC+ VKK
Sbjct: 121 VLRQIIQLLQENGTEIVDINQSTVANRAFHKIIAQMAGEGTTLEGAKGERICERVKK 177

[Close]

BLAST of Csor.00g298840 vs. ExPASy TrEMBL
Match: A0A6J1JZ96 (transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490190 PE=4 SV=1)

HSP 1 Score: 183 bits (464), Expect = 2.04e-55
Identity = 109/177 (61.58%), Postives = 123/177 (69.49%), Query Frame = 0


Query: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60
           MAD FIH S+S KTDRK IE      MKALFS LHSLVPNQ STEG+TTL  Q+ENATNY
Sbjct: 1   MADNFIHYSTSTKTDRKTIE------MKALFSTLHSLVPNQISTEGETTLPVQIENATNY 60

Query: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLLVQVDAHQ----------------- 120
           I QLKENVEKLK KREKL+GS     R GEI+ARLLVQV+AHQ                 
Sbjct: 61  IKQLKENVEKLKEKREKLIGS-----REGEIKARLLVQVEAHQVGSSLEVLLTTGSDYLL 120

Query: 121 -------LLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKIVKK 153
                  LLQENGTQI+HIN ST+ + VFHKI+A+MVGEG + E  +GERIC+ VKK
Sbjct: 121 VLNQILQLLQENGTQIIHINHSTIINRVFHKIVAQMVGEGMSSEGVDGERICETVKK 166

[Close]

BLAST of Csor.00g298840 vs. ExPASy TrEMBL
Match: A0A6J1GVE3 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111457231 PE=4 SV=1)

HSP 1 Score: 175 bits (444), Expect = 2.41e-52
Identity = 103/169 (60.95%), Postives = 126/169 (74.56%), Query Frame = 0


Query: 1   MADKFIHSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNY 60
           MA+  IH+ S +++D K+IE+NR EEMKALFS LHSLVPN+S  EG+T L DQ+ENATNY
Sbjct: 1   MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNY 60

Query: 61  INQLKENVEKLKVKREKLMGSGEKNLRRGEIEARLL---------VQVDAH-------QL 120
           INQLKENVEKLK K+EKLM  GE++    ++EAR++          + D H       QL
Sbjct: 61  INQLKENVEKLKEKKEKLMRLGEESTM-VQVEARIVGSSLEFLLTTRFDYHSILRQILQL 120

Query: 121 LQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKIVKK 153
           LQENGT+IVHIN+STVTD +FHKII +MVGEG   E AEGERIC+IVKK
Sbjct: 121 LQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKK 166

[Close]

BLAST of Csor.00g298840 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 60/181 (33.15%), Postives = 84/181 (46.41%), Query Frame = 0


Query: 7   HSSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNYINQLKE 66
           ++  S   DRK +E+NRR +MK+L+S L SL+P+ SSTE   TL DQL+ A NYI +L+ 
Sbjct: 7   NTGQSRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTE-PLTLPDQLDEAANYIKKLQV 66

Query: 67  NVEKLKVKR---------EKLMGSGEKNL------------------RRGEIEARLLVQV 126
           NVEK + ++         EKL   G  ++                    G I    LV  
Sbjct: 67  NVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTS 126

Query: 127 DAHQ---------LLQENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFESAEGERICKI 152
             H+         L +E G +I H   S V D VFH +  ++        S   ER+ KI
Sbjct: 127 LEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEHDYGARSQIPERLEKI 186

[Close]

BLAST of Csor.00g298840 vs. TAIR 10
Match: AT1G10585.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.1e-05
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = 0


Query: 8   SSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNYINQLKEN 67
           +SSS +  R + E++RR  MK LFS L S V    S      +   ++ AT+Y+ QLKEN
Sbjct: 11  NSSSLREQRNLREKDRRMRMKHLFSILSSHV----SPTRKLPVPHLIDQATSYMIQLKEN 70

Query: 68  VEKLKVKREKLMGSGEKNLRRGE--------------IEARLLV-----QVDAHQLL--- 127
           V  LK K+  L+     NL  G               IE  L++     +V  H+L+   
Sbjct: 71  VNYLKEKKRTLLQGELGNLYEGSFLLPKLSIRSRDSTIEMNLIMDLNMKRVMLHELVSIF 130

Query: 128 QENGTQIVHINQSTVTDLVFHKIIAEMVGEGTTFE-SAEGERICKIV 152
           +E G Q++  N   + D   + IIA+ +      + S   ER+ KI+
Sbjct: 131 EEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSRIEERVRKII 173

[Close]

BLAST of Csor.00g298840 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 8.0e-05
Identity = 38/143 (26.57%), Postives = 71/143 (49.65%), Query Frame = 0


Query: 13  KTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNYINQLKENVEKLK 72
           K   K IE+ RR+EM +L++ L SL+P +   +G  +  DQ++ A NYI+ L+ N++ + 
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLE-FIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 62

Query: 73  VKREKLMGSGEKNLRR------GEIEARLLVQ-----------------VDAHQLLQENG 132
            KR+ L+    ++ R        EI   ++++                     Q+L+E+G
Sbjct: 63  SKRDDLVLLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSILQTPFSSVLQVLREHG 122

[Close]

BLAST of Csor.00g298840 vs. TAIR 10
Match: AT1G10586.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 42/148 (28.38%), Postives = 68/148 (45.95%), Query Frame = 0


Query: 8   SSSSAKTDRKIIERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNYINQLKEN 67
           S+SS +  R + E+ RR  MK LFS L S V    S      +   ++ A +Y+ QLKE 
Sbjct: 11  SASSLREQRNLREKERRMRMKHLFSILSSHV----SPTRRLPVPQLIDQAVSYMIQLKEK 70

Query: 68  VEKLKVKREKLMGSGEKNLRRGE--------------IEARLLVQVD-----AHQLL--- 127
           V  L   + +++G   KN   G               IE  L++ ++      H+L+   
Sbjct: 71  VNYLNEMKRRMLGGEVKNRSEGSSLLPKLSIRSLDSIIEMNLVMDLNMKGVMLHKLVSVF 130

Query: 128 QENGTQIVHINQSTVTDLVFHKIIAEMV 134
           +E G Q++  N   + D  F+ IIA+ +
Sbjct: 131 EEEGAQVMSANLQNLNDRTFYTIIAQAI 154

[Close]

BLAST of Csor.00g298840 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 3.0e-04
Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 20 ERNRREEMKALFSHLHSLVPNQSSTEGDTTLLDQLENATNYINQLKENVEKLKVKREKLM 79
          ER RR+EM +L++ L SL+P     +G  +  DQ+  A NYI  L+  +++L V+R+ LM
Sbjct: 10 ERQRRQEMASLYASLRSLLP-LHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSVRRDDLM 68

The following BLAST results are available for this feature:

BLAST of Csor.00g298840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JIJ7	3.6e-10	33.15	Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=...	[more]
F4I4E1	3.0e-04	30.54	Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=...	[more]

BLAST of Csor.00g298840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573269.1	2.80e-136	100.00	Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma...	[more]
XP_023542777.1	2.92e-68	70.06	uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo]	[more]
KAG6573268.1	6.68e-67	69.49	Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma...	[more]
XP_022955188.1	9.47e-67	69.49	uncharacterized protein LOC111457229 [Cucurbita moschata]	[more]
XP_022994474.1	7.57e-65	68.93	transcription factor bHLH167-like [Cucurbita maxima]	[more]

BLAST of Csor.00g298840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GT92	4.58e-67	69.49	uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC1114572...	[more]
A0A6J1K2Y3	3.66e-65	68.93	transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE...	[more]
A0A6J1K483	1.30e-62	64.97	transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE...	[more]
A0A6J1JZ96	2.04e-55	61.58	transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490190 PE...	[more]
A0A6J1GVE3	2.41e-52	60.95	transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111457231 ...	[more]

BLAST of Csor.00g298840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20970.1	2.6e-11	33.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10585.1	2.1e-05	30.54	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	8.0e-05	26.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10586.1	1.4e-04	28.38	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	3.0e-04	40.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 54..81
None	No IPR available	PANTHER	PTHR13935:SF90	TRANSCRIPTION FACTOR BHLH162	coord: 7..85
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 17..70 e-value: 4.2E-5 score: 33.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 14..65 e-value: 1.3E-7 score: 31.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 11..64 score: 11.667798
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 4..92 e-value: 8.3E-12 score: 46.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 9..81
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 7..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g298840.m01	Csor.00g298840.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity