Csor.00g298320 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGCCAACAGGTTATAGAGAGTTTAGATTCTCTCTGGTTCTTCGCCACCGTATTTTCCAACAGAGCGCCGCCGCCGGTCGTCGAAAAGCTGGAAATTCCGGCTCAAAACGACGCCGTTAAGCCTCCCGGAGAAGAAATTTCGACACCCATTGTAGATGTGAGTTATAGTGTGAAGGAGATTTGTGAATGTTGGGTGGTTCAAGAGAGAATTAGAAATGAGTGGAAGAAGAAGGTGTGTGGCTATGAAGATAGTACAATTATGAAAGAGCATATAAGATTGTGGGCTTATGCTGTGGCTTCTACTGTTAGATGA ATGGAAAGCCAACAGGTTATAGAGAGTTTAGATTCTCTCTGGTTCTTCGCCACCGTATTTTCCAACAGAGCGCCGCCGCCGGTCGTCGAAAAGCTGGAAATTCCGGCTCAAAACGACGCCGTTAAGCCTCCCGGAGAAGAAATTTCGACACCCATTGTAGATGTGAGTTATAGTGTGAAGGAGATTTGTGAATGTTGGGTGGTTCAAGAGAGAATTAGAAATGAGTGGAAGAAGAAGGTGTGTGGCTATGAAGATAGTACAATTATGAAAGAGCATATAAGATTGTGGGCTTATGCTGTGGCTTCTACTGTTAGATGA ATGGAAAGCCAACAGGTTATAGAGAGTTTAGATTCTCTCTGGTTCTTCGCCACCGTATTTTCCAACAGAGCGCCGCCGCCGGTCGTCGAAAAGCTGGAAATTCCGGCTCAAAACGACGCCGTTAAGCCTCCCGGAGAAGAAATTTCGACACCCATTGTAGATGTGAGTTATAGTGTGAAGGAGATTTGTGAATGTTGGGTGGTTCAAGAGAGAATTAGAAATGAGTGGAAGAAGAAGGTGTGTGGCTATGAAGATAGTACAATTATGAAAGAGCATATAAGATTGTGGGCTTATGCTGTGGCTTCTACTGTTAGATGA MESQQVIESLDSLWFFATVFSNRAPPPVVEKLEIPAQNDAVKPPGEEISTPIVDVSYSVKEICECWVVQERIRNEWKKKVCGYEDSTIMKEHIRLWAYAVASTVR Homology
BLAST of Csor.00g298320 vs. NCBI nr
Match: KAG6573321.1 (hypothetical protein SDJN03_27208, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 217 bits (552), Expect = 4.01e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Csor.00g298320 vs. NCBI nr
Match: KAG7012490.1 (hypothetical protein SDJN02_25242, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 175 bits (444), Expect = 9.05e-55 Identity = 83/85 (97.65%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Csor.00g298320 vs. NCBI nr
Match: XP_022927166.1 (uncharacterized protein LOC111434099 [Cucurbita moschata]) HSP 1 Score: 114 bits (285), Expect = 1.12e-29 Identity = 71/168 (42.26%), Postives = 87/168 (51.79%), Query Frame = 0
BLAST of Csor.00g298320 vs. NCBI nr
Match: XP_038895160.1 (uncharacterized protein LOC120083464 [Benincasa hispida]) HSP 1 Score: 111 bits (278), Expect = 1.25e-28 Identity = 71/164 (43.29%), Postives = 85/164 (51.83%), Query Frame = 0
BLAST of Csor.00g298320 vs. NCBI nr
Match: KAG7019562.1 (hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109 bits (272), Expect = 1.10e-27 Identity = 71/170 (41.76%), Postives = 87/170 (51.18%), Query Frame = 0
BLAST of Csor.00g298320 vs. ExPASy TrEMBL
Match: A0A6J1EGY0 (uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC111434099 PE=4 SV=1) HSP 1 Score: 114 bits (285), Expect = 5.44e-30 Identity = 71/168 (42.26%), Postives = 87/168 (51.79%), Query Frame = 0
BLAST of Csor.00g298320 vs. ExPASy TrEMBL
Match: A0A5A7UQZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002450 PE=4 SV=1) HSP 1 Score: 108 bits (269), Expect = 8.74e-28 Identity = 71/151 (47.02%), Postives = 81/151 (53.64%), Query Frame = 0
BLAST of Csor.00g298320 vs. ExPASy TrEMBL
Match: A0A1S3B8X4 (uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=4 SV=1) HSP 1 Score: 108 bits (269), Expect = 8.74e-28 Identity = 71/151 (47.02%), Postives = 81/151 (53.64%), Query Frame = 0
BLAST of Csor.00g298320 vs. ExPASy TrEMBL
Match: A0A0A0LX63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1) HSP 1 Score: 106 bits (264), Expect = 5.00e-27 Identity = 71/151 (47.02%), Postives = 80/151 (52.98%), Query Frame = 0
BLAST of Csor.00g298320 vs. ExPASy TrEMBL
Match: A0A6J1KF61 (uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257 PE=4 SV=1) HSP 1 Score: 103 bits (257), Expect = 1.12e-25 Identity = 69/175 (39.43%), Postives = 86/175 (49.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|