Csor.00g297470 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATGCAAGAACACCAAGCATTCTCGAGTAGTTGTGACAGCCACCACGGACAATAACGGCTACTTCTGGCTAGCGACGAAGGACGTTTCGAGCCACGCATACCACCGATGCAAGGTTTATAATGTGAAGTCGTCGAACAAAAATTGCACTATAACGTCGAAAATGAACGGCGGAATAGAGGGGGCGGAGTTGAGGCCGGTGAAGGCATTCTTGGACGCTGAGAAGAAACCGGTTGTGCTTTACAGTGTTGGACCATTAGCATACGAACCCACCTGTCCATGTTGA ATGACATGCAAGAACACCAAGCATTCTCGAGTAGTTGTGACAGCCACCACGGACAATAACGGCTACTTCTGGCTAGCGACGAAGGACGTTTCGAGCCACGCATACCACCGATGCAAGGTTTATAATGTGAAGTCGTCGAACAAAAATTGCACTATAACGTCGAAAATGAACGGCGGAATAGAGGGGGCGGAGTTGAGGCCGGTGAAGGCATTCTTGGACGCTGAGAAGAAACCGGTTGTGCTTTACAGTGTTGGACCATTAGCATACGAACCCACCTGTCCATGTTGA ATGACATGCAAGAACACCAAGCATTCTCGAGTAGTTGTGACAGCCACCACGGACAATAACGGCTACTTCTGGCTAGCGACGAAGGACGTTTCGAGCCACGCATACCACCGATGCAAGGTTTATAATGTGAAGTCGTCGAACAAAAATTGCACTATAACGTCGAAAATGAACGGCGGAATAGAGGGGGCGGAGTTGAGGCCGGTGAAGGCATTCTTGGACGCTGAGAAGAAACCGGTTGTGCTTTACAGTGTTGGACCATTAGCATACGAACCCACCTGTCCATGTTGA MTCKNTKHSRVVVTATTDNNGYFWLATKDVSSHAYHRCKVYNVKSSNKNCTITSKMNGGIEGAELRPVKAFLDAEKKPVVLYSVGPLAYEPTCPC Homology
BLAST of Csor.00g297470 vs. ExPASy Swiss-Prot
Match: Q9FZA2 (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-11 Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 0
BLAST of Csor.00g297470 vs. ExPASy Swiss-Prot
Match: P93013 (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP30 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 5.5e-09 Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of Csor.00g297470 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-07 Identity = 34/95 (35.79%), Postives = 48/95 (50.53%), Query Frame = 0
BLAST of Csor.00g297470 vs. NCBI nr
Match: KAG6573405.1 (Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 200 bits (509), Expect = 7.01e-65 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of Csor.00g297470 vs. NCBI nr
Match: KAG7012566.1 (Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 200 bits (509), Expect = 1.72e-62 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of Csor.00g297470 vs. NCBI nr
Match: XP_022955047.1 (non-classical arabinogalactan protein 31-like [Cucurbita moschata]) HSP 1 Score: 197 bits (500), Expect = 6.97e-61 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Csor.00g297470 vs. NCBI nr
Match: XP_022994866.1 (non-classical arabinogalactan protein 31-like [Cucurbita maxima]) HSP 1 Score: 189 bits (480), Expect = 2.02e-58 Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0
BLAST of Csor.00g297470 vs. NCBI nr
Match: XP_023542178.1 (non-classical arabinogalactan protein 30-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 189 bits (479), Expect = 1.95e-57 Identity = 89/94 (94.68%), Postives = 92/94 (97.87%), Query Frame = 0
BLAST of Csor.00g297470 vs. ExPASy TrEMBL
Match: A0A6J1GSI4 (non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111457125 PE=4 SV=1) HSP 1 Score: 197 bits (500), Expect = 3.37e-61 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Csor.00g297470 vs. ExPASy TrEMBL
Match: A0A6J1K0H2 (non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111490464 PE=4 SV=1) HSP 1 Score: 189 bits (480), Expect = 9.79e-59 Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0
BLAST of Csor.00g297470 vs. ExPASy TrEMBL
Match: A0A6J1KM21 (non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111495792 PE=4 SV=1) HSP 1 Score: 130 bits (328), Expect = 6.58e-36 Identity = 62/94 (65.96%), Postives = 80/94 (85.11%), Query Frame = 0
BLAST of Csor.00g297470 vs. ExPASy TrEMBL
Match: A0A6J1EHN2 (non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111434378 PE=4 SV=1) HSP 1 Score: 130 bits (327), Expect = 1.12e-35 Identity = 63/94 (67.02%), Postives = 78/94 (82.98%), Query Frame = 0
BLAST of Csor.00g297470 vs. ExPASy TrEMBL
Match: A0A0A0LXF0 (Structural constituent of cell wall OS=Cucumis sativus OX=3659 GN=Csa_1G074910 PE=4 SV=1) HSP 1 Score: 129 bits (323), Expect = 5.07e-35 Identity = 61/94 (64.89%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of Csor.00g297470 vs. TAIR 10
Match: AT2G34700.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 73.6 bits (179), Expect = 9.9e-14 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of Csor.00g297470 vs. TAIR 10
Match: AT1G28290.1 (arabinogalactan protein 31 ) HSP 1 Score: 70.5 bits (171), Expect = 8.4e-13 Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 0
BLAST of Csor.00g297470 vs. TAIR 10
Match: AT1G28290.2 (arabinogalactan protein 31 ) HSP 1 Score: 70.5 bits (171), Expect = 8.4e-13 Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 0
BLAST of Csor.00g297470 vs. TAIR 10
Match: AT2G33790.1 (arabinogalactan protein 30 ) HSP 1 Score: 61.6 bits (148), Expect = 3.9e-10 Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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