Csor.00g295410 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g295410
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr05: 3427878 .. 3428267 (-)
RNA-Seq ExpressionCsor.00g295410
SyntenyCsor.00g295410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTGTTATCAATGGAGGCAGACTCAGCAGGCTATTGAGGATGTTAAAGGAGTTACCAGCACGGCAGTTCTCCCAGCCATCGGTTGGACATTGGCTGCTGCGTTCTCGAGTCGCTCCCATATCTGCTTTCGTTTCGTTGCTGTAACGGTTACTTTTGCTTCTTCCTCCTTGAAGTGTGCATGGCAGGATATGAATAGCTCATCATCCATCTCCATGAATATCTTTCTAACGTTAAGGGTCAGGTTCACCACTGCTGGATTCCAATGGCTCTGCGCGTTCCTCTCTAAGGTGGGAAGTATGATGGGCAATATCACGTGTCGGTTGTGTCCAATCAAGTTCACGATGTGGTCGTTGTTCCATAAGAAAAGGGCCCTTTCAGCTACCTGA

mRNA sequence

ATGTTTTGTTATCAATGGAGGCAGACTCAGCAGGCTATTGAGGATGTTAAAGGAGTTACCAGCACGGCAGTTCTCCCAGCCATCGGTTGGACATTGGCTGCTGCGTTCTCGAGTCGCTCCCATATCTGCTTTCGTTTCGTTGCTGTAACGGTTACTTTTGCTTCTTCCTCCTTGAAGTGTGCATGGCAGGATATGAATAGCTCATCATCCATCTCCATGAATATCTTTCTAACGTTAAGGGTCAGGTTCACCACTGCTGGATTCCAATGGCTCTGCGCGTTCCTCTCTAAGGTGGGAAGTATGATGGGCAATATCACGTGTCGGTTGTGTCCAATCAAGTTCACGATGTGGTCGTTGTTCCATAAGAAAAGGGCCCTTTCAGCTACCTGA

Coding sequence (CDS)

ATGTTTTGTTATCAATGGAGGCAGACTCAGCAGGCTATTGAGGATGTTAAAGGAGTTACCAGCACGGCAGTTCTCCCAGCCATCGGTTGGACATTGGCTGCTGCGTTCTCGAGTCGCTCCCATATCTGCTTTCGTTTCGTTGCTGTAACGGTTACTTTTGCTTCTTCCTCCTTGAAGTGTGCATGGCAGGATATGAATAGCTCATCATCCATCTCCATGAATATCTTTCTAACGTTAAGGGTCAGGTTCACCACTGCTGGATTCCAATGGCTCTGCGCGTTCCTCTCTAAGGTGGGAAGTATGATGGGCAATATCACGTGTCGGTTGTGTCCAATCAAGTTCACGATGTGGTCGTTGTTCCATAAGAAAAGGGCCCTTTCAGCTACCTGA

Protein sequence

MFCYQWRQTQQAIEDVKGVTSTAVLPAIGWTLAAAFSSRSHICFRFVAVTVTFASSSLKCAWQDMNSSSSISMNIFLTLRVRFTTAGFQWLCAFLSKVGSMMGNITCRLCPIKFTMWSLFHKKRALSAT
Homology
[Close]
BLAST of Csor.00g295410 vs. NCBI nr
Match: KAG6598828.1 (hypothetical protein SDJN03_08606, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 264 bits (675), Expect = 4.09e-89
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 1   MFCYQWRQTQQAIEDVKGVTSTAVLPAIGWTLAAAFSSRSHICFRFVAVTVTFASSSLKC 60
           MFCYQWRQTQQAIEDVKGVTSTAVLPAIGWTLAAAFSSRSHICFRFVAVTVTFASSSLKC
Sbjct: 1   MFCYQWRQTQQAIEDVKGVTSTAVLPAIGWTLAAAFSSRSHICFRFVAVTVTFASSSLKC 60

Query: 61  AWQDMNSSSSISMNIFLTLRVRFTTAGFQWLCAFLSKVGSMMGNITCRLCPIKFTMWSLF 120
           AWQDMNSSSSISMNIFLTLRVRFTTAGFQWLCAFLSKVGSMMGNITCRLCPIKFTMWSLF
Sbjct: 61  AWQDMNSSSSISMNIFLTLRVRFTTAGFQWLCAFLSKVGSMMGNITCRLCPIKFTMWSLF 120

Query: 121 HKKRALSAT 129
           HKKRALSAT
Sbjct: 121 HKKRALSAT 129

The following BLAST results are available for this feature:
BLAST of Csor.00g295410 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g295410 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6598828.14.09e-89100.00hypothetical protein SDJN03_08606, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g295410 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g295410 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g295410.m01Csor.00g295410.m01mRNA