Csor.00g293950 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g293950
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Auxin-responsive protein
Location	Csor_Chr09: 2276881 .. 2278059 (+)
RNA-Seq Expression	Csor.00g293950
Synteny	Csor.00g293950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTCAACTTGAGCTAGCGCTTTGTGTATCAGATCCCACCAGAGGTTTCGACCTGAACAGGGCTGCGTGTGATGGAAAAGATGTGTTCGGCTCAGATCCGAGGAGCTGTCTGTGTGCAGAAAGTACAAGCCATGGTAGACACAAGCGTGGATATGAAGATGCTTTCTTTAAGAGCAAAGACTCGTTTAAAGAGCTGTCTTTGCTGCTGTGGAGCGGTCACCCAAACAAGGAAGACGATGACTGGAAGGACACCAACCAGAGAAGCTCTTGTGCTCTACACATGTGAGTTCCATTTCCTCAACTGATTTTTCCTATTTTAGAATACTTTAATCTATGCTCGTTAGATAAATATGCTGATTTTTATCCTAACAGTCGATGGTTCAATCCTCCACTCCATAATTCAAAAGAAGTATTATTACGTAGGGAGAGAATTTGAACATCGACCCATGAGAGTAGACACTGGTATTTAACTACTTGGAGTTATGTGTTGATGAACTGATATACATCAAACAAGGAGATAATATATATTTCTCTGTTTTTAAGTTGGATTTCAGTTCTTATTTTCAATTATGGGTCTGAATTTCATTTTCAAACTTAAAATTGATGATTTGTTCCATTTTTCATAGCAGAAATGCTGGAGAGGAGAACAAAGTTATGGGTTGGCCGCCCATTAAATCGTGGAGGAAAAAGTACCTTCATGAACTGCAACAGGATGGCTTTGGTTCTGATCAGATACCAAATCACTATTGGATGGAAGAGGATGAAGATGATGAAATTGTTTTTAACCCAAAATATGTGAAGGTGAAGATGGAGGGGGTGCCAATAGCAAGGAAGATTGATGTGGGGCTGTATAGCTCTTATCAGACGCTGAAAACTGCCTTGATCCACATGTTTTCCGATTCTTGCTGTGAGTGAACAGTATAACGATTTATTTGCTCTTCCAAATTGGTTTAGATATATATAATCGACTGAGAATTAAGGATTTGAAACTCCCGATCTCTCATGTTTTGAACCCAAAATGATCCCATTTTTGTTGCTGAGTGGTAGTTAGATTCAAAGCTGACGTTTTCTATGAACAGATCAAAAGTGTGGGAGCAGTAATGCCAACTTAACTCTCACCTATCAGAACAAAGAAGGAGATTGGCTGCTTGCAGGAGATCTTCCATGGCAGTAA

mRNA sequence

ATGGAGCTTCAACTTGAGCTAGCGCTTTGTGTATCAGATCCCACCAGAGGTTTCGACCTGAACAGGGCTGCGTGTGATGGAAAAGATGTGTTCGGCTCAGATCCGAGGAGCTGTCTGTGTGCAGAAAGTACAAGCCATGGTAGACACAAGCGTGGATATGAAGATGCTTTCTTTAAGAGCAAAGACTCGTTTAAAGAGCTGTCTTTGCTGCTGTGGAGCGGTCACCCAAACAAGGAAGACGATGACTGGAAGGACACCAACCAGAGAAGCTCTTGTGCTCTACACATAAATGCTGGAGAGGAGAACAAAGTTATGGGTTGGCCGCCCATTAAATCGTGGAGGAAAAAGTACCTTCATGAACTGCAACAGGATGGCTTTGGTTCTGATCAGATACCAAATCACTATTGGATGGAAGAGGATGAAGATGATGAAATTGTTTTTAACCCAAAATATGTGAAGGTGAAGATGGAGGGGGTGCCAATAGCAAGGAAGATTGATGTGGGGCTGTATAGCTCTTATCAGACGCTGAAAACTGCCTTGATCCACATGTTTTCCGATTCTTGCTATCAAAAGTGTGGGAGCAGTAATGCCAACTTAACTCTCACCTATCAGAACAAAGAAGGAGATTGGCTGCTTGCAGGAGATCTTCCATGGCAGTAA

Coding sequence (CDS)

ATGGAGCTTCAACTTGAGCTAGCGCTTTGTGTATCAGATCCCACCAGAGGTTTCGACCTGAACAGGGCTGCGTGTGATGGAAAAGATGTGTTCGGCTCAGATCCGAGGAGCTGTCTGTGTGCAGAAAGTACAAGCCATGGTAGACACAAGCGTGGATATGAAGATGCTTTCTTTAAGAGCAAAGACTCGTTTAAAGAGCTGTCTTTGCTGCTGTGGAGCGGTCACCCAAACAAGGAAGACGATGACTGGAAGGACACCAACCAGAGAAGCTCTTGTGCTCTACACATAAATGCTGGAGAGGAGAACAAAGTTATGGGTTGGCCGCCCATTAAATCGTGGAGGAAAAAGTACCTTCATGAACTGCAACAGGATGGCTTTGGTTCTGATCAGATACCAAATCACTATTGGATGGAAGAGGATGAAGATGATGAAATTGTTTTTAACCCAAAATATGTGAAGGTGAAGATGGAGGGGGTGCCAATAGCAAGGAAGATTGATGTGGGGCTGTATAGCTCTTATCAGACGCTGAAAACTGCCTTGATCCACATGTTTTCCGATTCTTGCTATCAAAAGTGTGGGAGCAGTAATGCCAACTTAACTCTCACCTATCAGAACAAAGAAGGAGATTGGCTGCTTGCAGGAGATCTTCCATGGCAGTAA

Protein sequence

MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ

Homology

[Close]

BLAST of Csor.00g293950 vs. ExPASy Swiss-Prot
Match: Q93WC4 (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 2.5e-20
Identity = 77/246 (31.30%), Postives = 116/246 (47.15%), Query Frame = 0


Query: 1   MELQLELALCVSDPTR---GFDLNR-AACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDA 60
           MEL L L+L     ++    FDLN+  A +G         SCL       G  K  +E  
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEG-------AASCL-------GTEKLRFEAT 60

Query: 61  F----FKSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKS 120
           F     +      +  L   +G PN+ED+   D  +  S  ++ +  E ++V+GWPP+K+
Sbjct: 61  FGLGNVEENCYMPKQRLFALNGQPNEEDE---DPLESESSIVYDDEEENSEVVGWPPVKT 120

Query: 121 WRKKYLHELQQDGFGSDQIPNHY-WMEEDEDDEIVFNP------------------KYVK 180
              KY     +        P H+        +  + NP                   YVK
Sbjct: 121 CMIKYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVK 180

Query: 181 VKMEGVPIARKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLA 220
           VKM+GV IARK+D+ L++SY++L  +LI MF++  Y+ C   + N T T+Q KEGDWLL 
Sbjct: 181 VKMDGVAIARKVDIKLFNSYESLTNSLITMFTE--YEDCDREDTNYTFTFQGKEGDWLLR 227

[Close]

BLAST of Csor.00g293950 vs. ExPASy Swiss-Prot
Match: Q75GB1 (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.8e-16
Identity = 50/146 (34.25%), Postives = 83/146 (56.85%), Query Frame = 0


Query: 78  KEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWM 137
           +ED+D ++ +++ + A    A +  +V+GWPPI+S+RK  +         ++Q+ +    
Sbjct: 92  EEDEDAEEEDKKVAAAPQAPAAKA-QVVGWPPIRSYRKNTM--------ATNQLKS---S 151

Query: 138 EEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSS-- 197
           +ED + +      YVKV M+G P  RK+D+  Y +Y+ L TAL  MF      K G S  
Sbjct: 152 KEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDGLSES 211

Query: 198 --NANLTLTYQNKEGDWLLAGDLPWQ 220
             +    LTY++K+GDW+L GD+PW+
Sbjct: 212 RKDGEYVLTYEDKDGDWMLVGDVPWE 225

[Close]

BLAST of Csor.00g293950 vs. ExPASy Swiss-Prot
Match: A2WTQ5 (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica OX=39946 GN=IAA5 PE=2 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 48/134 (35.82%), Postives = 66/134 (49.25%), Query Frame = 0


Query: 103 KVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIA 162
           +V+GWPP++++RK  L      G G D+                  P YVKV M+G P  
Sbjct: 118 QVVGWPPVRNYRKNTLAASASKGKGEDK------------GTAEGGPLYVKVSMDGAPYL 177

Query: 163 RKIDVGLYSSYQTLKTALIHMFSDSCYQKCG---SSNAN---------------LTLTYQ 219
           RK+D+ +YSSY+ L  AL  MFS     + G   SSN +                 LTY+
Sbjct: 178 RKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYE 237

[Close]

BLAST of Csor.00g293950 vs. ExPASy Swiss-Prot
Match: Q0JKG7 (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA5 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 48/134 (35.82%), Postives = 66/134 (49.25%), Query Frame = 0


Query: 103 KVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIA 162
           +V+GWPP++++RK  L      G G D+                  P YVKV M+G P  
Sbjct: 117 QVVGWPPVRNYRKNTLAASASKGKGEDK------------GTAEGGPLYVKVSMDGAPYL 176

Query: 163 RKIDVGLYSSYQTLKTALIHMFSDSCYQKCG---SSNAN---------------LTLTYQ 219
           RK+D+ +YSSY+ L  AL  MFS     + G   SSN +                 LTY+
Sbjct: 177 RKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYE 236

[Close]

BLAST of Csor.00g293950 vs. ExPASy Swiss-Prot
Match: Q5VRR0 (Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA20 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-14
Identity = 67/224 (29.91%), Postives = 94/224 (41.96%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAF--F 60
           MEL+L L L +  P+       AA    D+  S P SC           KRG+E+A   F
Sbjct: 1   MELELGLRLALPSPSPSPATATAAGSELDLLNSAPGSC----------RKRGFEEALGGF 60

Query: 61  KSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYL 120
           K+ D   +      +G     D D +  N+R             K++GWPP+K      L
Sbjct: 61  KTDDDNDD-----GNGRGGDGDSDGEMGNKR------------RKLVGWPPVKC-----L 120

Query: 121 HELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKT 180
           H  +  G G                       YVKVKMEG+ I RK+D+ +  SY  L  
Sbjct: 121 HRRRDGGCGGG---------------------YVKVKMEGLAIGRKLDLSILGSYAELLD 170

Query: 181 ALIHMFSDSCYQKCGSSNAN---LTLTYQNKEGDWLLAGDLPWQ 220
            L H+   S  Q+ G          +TY++ EGDW+  GD+PW+
Sbjct: 181 TL-HLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWE 170

[Close]

BLAST of Csor.00g293950 vs. NCBI nr
Match: KAG6591567.1 (Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. sororia] >KAG6591604.1 Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 471 bits (1212), Expect = 4.85e-168
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120

Query: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180
           LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180

Query: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219
           IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Csor.00g293950 vs. NCBI nr
Match: XP_022937068.1 (auxin-responsive protein IAA28 isoform X2 [Cucurbita moschata])

HSP 1 Score: 469 bits (1208), Expect = 3.81e-167
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120

Query: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180
           LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTL+TAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLETAL 180

Query: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219
           IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Csor.00g293950 vs. NCBI nr
Match: XP_022937067.1 (auxin-responsive protein IAA28 isoform X1 [Cucurbita moschata])

HSP 1 Score: 465 bits (1196), Expect = 2.67e-165
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI-NAGEENKVMGWPPIKSWRKKYLH 120
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI NAGEENKVMGWPPIKSWRKKYLH
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHIRNAGEENKVMGWPPIKSWRKKYLH 120

Query: 121 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 180
           ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTL+TA
Sbjct: 121 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLETA 180

Query: 181 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219
           LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 220

[Close]

BLAST of Csor.00g293950 vs. NCBI nr
Match: XP_023535367.1 (auxin-responsive protein IAA28 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 463 bits (1192), Expect = 1.05e-164
Identity = 217/219 (99.09%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCL AESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 60

Query: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINA EENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLHE 120

Query: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180
           LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180

Query: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219
           IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Csor.00g293950 vs. NCBI nr
Match: XP_022976193.1 (auxin-responsive protein IAA28-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 462 bits (1189), Expect = 3.01e-164
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120

Query: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180
           LQQDGFGSDQIPNHYWMEEDED+EIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDEEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180

Query: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219
           I MFSDSCYQKCGSSNA LTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IPMFSDSCYQKCGSSNAILTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Csor.00g293950 vs. ExPASy TrEMBL
Match: A0A6J1FF02 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443480 PE=3 SV=1)

HSP 1 Score: 469 bits (1208), Expect = 1.85e-167
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120

Query: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180
           LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTL+TAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLETAL 180

Query: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219
           IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Csor.00g293950 vs. ExPASy TrEMBL
Match: A0A6J1FA34 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443480 PE=3 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 1.29e-165
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI-NAGEENKVMGWPPIKSWRKKYLH 120
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI NAGEENKVMGWPPIKSWRKKYLH
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHIRNAGEENKVMGWPPIKSWRKKYLH 120

Query: 121 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 180
           ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTL+TA
Sbjct: 121 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLETA 180

Query: 181 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219
           LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 220

[Close]

BLAST of Csor.00g293950 vs. ExPASy TrEMBL
Match: A0A6J1ILE5 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111476655 PE=3 SV=1)

HSP 1 Score: 462 bits (1189), Expect = 1.46e-164
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120

Query: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180
           LQQDGFGSDQIPNHYWMEEDED+EIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDEEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180

Query: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219
           I MFSDSCYQKCGSSNA LTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IPMFSDSCYQKCGSSNAILTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Csor.00g293950 vs. ExPASy TrEMBL
Match: A0A6J1IF49 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111476655 PE=3 SV=1)

HSP 1 Score: 457 bits (1177), Expect = 1.02e-162
Identity = 216/220 (98.18%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI-NAGEENKVMGWPPIKSWRKKYLH 120
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI NAGEENKVMGWPPIKSWRKKYLH
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHIRNAGEENKVMGWPPIKSWRKKYLH 120

Query: 121 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 180
           ELQQDGFGSDQIPNHYWMEEDED+EIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA
Sbjct: 121 ELQQDGFGSDQIPNHYWMEEDEDEEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 180

Query: 181 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219
           LI MFSDSCYQKCGSSNA LTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 LIPMFSDSCYQKCGSSNAILTLTYQNKEGDWLLAGDLPWQ 220

[Close]

BLAST of Csor.00g293950 vs. ExPASy TrEMBL
Match: A0A0A0LGM4 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G877650 PE=3 SV=1)

HSP 1 Score: 380 bits (977), Expect = 2.70e-132
Identity = 183/220 (83.18%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHG-RHKRGYEDAFFK 60
           MELQLEL L V DPTRGFDLNR ACDGKDVFGSDPRS LCAESTSHG R+KRG+EDAFFK
Sbjct: 1   MELQLELELSVPDPTRGFDLNRNACDGKDVFGSDPRSYLCAESTSHGKRNKRGFEDAFFK 60

Query: 61  SKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLH 120
           +K SFKE+SLLLW+GHPNKEDDD KDTNQRSSCA+HI A EENK +GWPPI SWRK++LH
Sbjct: 61  TKGSFKEMSLLLWNGHPNKEDDDRKDTNQRSSCAIHIKAVEENKAVGWPPIASWRKRHLH 120

Query: 121 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 180
            LQQ G GSD    +YWMEEDEDD IVFNPKYVKVKMEGVPIARKIDVG+Y+SYQTLKTA
Sbjct: 121 GLQQGGPGSD----NYWMEEDEDDGIVFNPKYVKVKMEGVPIARKIDVGMYNSYQTLKTA 180

Query: 181 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219
            I+MFSDSCYQKCG+SNA+LTLTYQ+KEGDWLLAGDLPWQ
Sbjct: 181 SINMFSDSCYQKCGNSNASLTLTYQDKEGDWLLAGDLPWQ 216

[Close]

BLAST of Csor.00g293950 vs. TAIR 10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29 )

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21
Identity = 77/246 (31.30%), Postives = 116/246 (47.15%), Query Frame = 0


Query: 1   MELQLELALCVSDPTR---GFDLNR-AACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDA 60
           MEL L L+L     ++    FDLN+  A +G         SCL       G  K  +E  
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEG-------AASCL-------GTEKLRFEAT 60

Query: 61  F----FKSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKS 120
           F     +      +  L   +G PN+ED+   D  +  S  ++ +  E ++V+GWPP+K+
Sbjct: 61  FGLGNVEENCYMPKQRLFALNGQPNEEDE---DPLESESSIVYDDEEENSEVVGWPPVKT 120

Query: 121 WRKKYLHELQQDGFGSDQIPNHY-WMEEDEDDEIVFNP------------------KYVK 180
              KY     +        P H+        +  + NP                   YVK
Sbjct: 121 CMIKYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVK 180

Query: 181 VKMEGVPIARKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLA 220
           VKM+GV IARK+D+ L++SY++L  +LI MF++  Y+ C   + N T T+Q KEGDWLL 
Sbjct: 181 VKMDGVAIARKVDIKLFNSYESLTNSLITMFTE--YEDCDREDTNYTFTFQGKEGDWLLR 227

[Close]

BLAST of Csor.00g293950 vs. TAIR 10
Match: AT2G22670.1 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-15
Identity = 59/194 (30.41%), Postives = 86/194 (44.33%), Query Frame = 0


Query: 49  HKRGYEDA---FFKSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENK-- 108
           +KRG+ D    F   K S +    +     P  +D       +RS     +N     K  
Sbjct: 106 NKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQ 165

Query: 109 VMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIAR 168
           V+GWPPI+S+RK  +         S    N     ++ D +      +VKV M+G P  R
Sbjct: 166 VVGWPPIRSYRKNTM--------ASSTSKN----TDEVDGKPGLGVLFVKVSMDGAPYLR 225

Query: 169 KIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNA------------------NLTLTYQN 220
           K+D+  Y+SYQ L +AL  MFS     +CG   A                     LTY++
Sbjct: 226 KVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYED 285

[Close]

BLAST of Csor.00g293950 vs. TAIR 10
Match: AT2G22670.2 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-15
Identity = 59/194 (30.41%), Postives = 86/194 (44.33%), Query Frame = 0


Query: 49  HKRGYEDA---FFKSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENK-- 108
           +KRG+ D    F   K S +    +     P  +D       +RS     +N     K  
Sbjct: 106 NKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQ 165

Query: 109 VMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIAR 168
           V+GWPPI+S+RK  +         S    N     ++ D +      +VKV M+G P  R
Sbjct: 166 VVGWPPIRSYRKNTM--------ASSTSKN----TDEVDGKPGLGVLFVKVSMDGAPYLR 225

Query: 169 KIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNA------------------NLTLTYQN 220
           K+D+  Y+SYQ L +AL  MFS     +CG   A                     LTY++
Sbjct: 226 KVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYED 285

[Close]

BLAST of Csor.00g293950 vs. TAIR 10
Match: AT2G22670.3 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-15
Identity = 59/194 (30.41%), Postives = 86/194 (44.33%), Query Frame = 0


Query: 49  HKRGYEDA---FFKSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENK-- 108
           +KRG+ D    F   K S +    +     P  +D       +RS     +N     K  
Sbjct: 106 NKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQ 165

Query: 109 VMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIAR 168
           V+GWPPI+S+RK  +         S    N     ++ D +      +VKV M+G P  R
Sbjct: 166 VVGWPPIRSYRKNTM--------ASSTSKN----TDEVDGKPGLGVLFVKVSMDGAPYLR 225

Query: 169 KIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNA------------------NLTLTYQN 220
           K+D+  Y+SYQ L +AL  MFS     +CG   A                     LTY++
Sbjct: 226 KVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYED 285

[Close]

BLAST of Csor.00g293950 vs. TAIR 10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-15
Identity = 59/194 (30.41%), Postives = 86/194 (44.33%), Query Frame = 0


Query: 49  HKRGYEDA---FFKSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENK-- 108
           +KRG+ D    F   K S +    +     P  +D       +RS     +N     K  
Sbjct: 123 NKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQ 182

Query: 109 VMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIAR 168
           V+GWPPI+S+RK  +         S    N     ++ D +      +VKV M+G P  R
Sbjct: 183 VVGWPPIRSYRKNTM--------ASSTSKN----TDEVDGKPGLGVLFVKVSMDGAPYLR 242

Query: 169 KIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNA------------------NLTLTYQN 220
           K+D+  Y+SYQ L +AL  MFS     +CG   A                     LTY++
Sbjct: 243 KVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYED 302

The following BLAST results are available for this feature:

BLAST of Csor.00g293950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WC4	2.5e-20	31.30	Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=...	[more]
Q75GB1	4.8e-16	34.25	Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17...	[more]
A2WTQ5	2.0e-14	35.82	Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica OX=39946 GN=IAA5 PE=...	[more]
Q0JKG7	2.0e-14	35.82	Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA5 P...	[more]
Q5VRR0	2.6e-14	29.91	Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA20...	[more]

BLAST of Csor.00g293950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591567.1	4.85e-168	100.00	Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_022937068.1	3.81e-167	99.54	auxin-responsive protein IAA28 isoform X2 [Cucurbita moschata]	[more]
XP_022937067.1	2.67e-165	99.09	auxin-responsive protein IAA28 isoform X1 [Cucurbita moschata]	[more]
XP_023535367.1	1.05e-164	99.09	auxin-responsive protein IAA28 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022976193.1	3.01e-164	98.63	auxin-responsive protein IAA28-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Csor.00g293950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FF02	1.85e-167	99.54	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443480 PE=3 SV=1	[more]
A0A6J1FA34	1.29e-165	99.09	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443480 PE=3 SV=1	[more]
A0A6J1ILE5	1.46e-164	98.63	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111476655 PE=3 SV=1	[more]
A0A6J1IF49	1.02e-162	98.18	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111476655 PE=3 SV=1	[more]
A0A0A0LGM4	2.70e-132	83.18	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G877650 PE=3 SV=1	[more]

BLAST of Csor.00g293950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32280.1	1.7e-21	31.30	indole-3-acetic acid inducible 29	[more]
AT2G22670.1	2.4e-15	30.41	indoleacetic acid-induced protein 8	[more]
AT2G22670.2	2.4e-15	30.41	indoleacetic acid-induced protein 8	[more]
AT2G22670.3	2.4e-15	30.41	indoleacetic acid-induced protein 8	[more]
AT2G22670.4	2.4e-15	30.41	indoleacetic acid-induced protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 46..197 e-value: 1.6E-23 score: 83.8 coord: 198..219 e-value: 5.2E-5 score: 23.2
None	No IPR available	GENE3D	3.10.20.90		coord: 145..219 e-value: 4.1E-22 score: 80.0
None	No IPR available	PANTHER	PTHR31734:SF44	AUXIN-RESPONSIVE PROTEIN IAA29	coord: 1..219
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 146..219
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 1..219
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 149..219 score: 21.662949

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g293950.m01	Csor.00g293950.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding