Csor.00g291470 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATACTCTCACTGACCTTCACTCACTGCCGTTCTTCAACTCCGCCGTCCACCACCCATCTTCCCCGCCGCCGATTTCCACCGGCTACTTGGAAGATGCCTTCCTGGAATTCACTTCCAAACGACCTCGTTTCGATCACCATCTTCTTCAATTGGAATTCCCTCACACCTACTGGAGTTCCTGTTGCACGTGGGAAGGAGATGCCTTCAATTCCACCAACCAAATCCACCATATCAATCATAATTATGATTATTATTATTATGATACGGTTTCTCCAGGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTTTTTAATTGTTCATGGTGAAGCTTATTAAATGAACCAACTTTATTTGGAAACAAAAAAACAAACGTACGGTTTGTTGGGGTTGTTTTAATTGAATGAAACTGAATTGGGTTTTTTTTCGTTTCGGGTTTTGGCTTGATTGAATGATTCAGATGAAATGTTCGGCGCGTCGCCAAAAAGCAGAATTAGCGACGAAACCAACACAGATCTATCCATGGGAGATATGAAAACGCCAGAAATTGAAGCGTTTTCCACTCCAAATGATTTCTATTATGAACATCAAGCGGATGCTGAGTTTTTGCCTTGCAAGCAGCCAATTTCAACAGGTTTTTTTTTTTTTTTTTTTTTTTGAGATTTTTCTATGAATTTGAGCTGATATGGGTATTGGGTATGCGTAATTATAATCAAAATACGATCTTGGTGGGGAAATTTGAATAATTTTCCAATAATTTTGATGGGTTTATTTTAAAATTTGTTTGGTTTGAATTGATCAGATGGTGGCAGTGTAACGAAGAGGCCCAAAAAGAGGAAAGTGGTGTATCCATTTGAGTTAGTGAAGCCGGGAGGCATCGACGGGGATATAACCTTAAACGACATAAACGAAAACATGTTGATGCCGCCGACACGGCCAGTCCGACACCCAGTTGGGGATTTCGCGTGTCGGCCGTGCGTGTCGGCGGAGGGACCGGGGCTGTCTGGGAAAGCCGTGGTGGCGCTGACCAAAATCCATACTCGAGGAAGGAGAGGGAGCATCACTATTATTAGAACCAGAGGCTAA ATGAATACTCTCACTGACCTTCACTCACTGCCGTTCTTCAACTCCGCCGTCCACCACCCATCTTCCCCGCCGCCGATTTCCACCGGCTACTTGGAAGATGCCTTCCTGGAATTCACTTCCAAACGACCTCGTTTCGATCACCATCTTCTTCAATTGGAATTCCCTCACACCTACTGGAGTTCCTGTTGCACGTGGGAAGGAGATGCCTTCAATTCCACCAACCAAATCCACCATATCAATCATAATTATGATTATTATTATTATGATACGGTTTCTCCAGATGAAATGTTCGGCGCGTCGCCAAAAAGCAGAATTAGCGACGAAACCAACACAGATCTATCCATGGGAGATATGAAAACGCCAGAAATTGAAGCGTTTTCCACTCCAAATGATTTCTATTATGAACATCAAGCGGATGCTGAGTTTTTGCCTTGCAAGCAGCCAATTTCAACAGATGGTGGCAGTGTAACGAAGAGGCCCAAAAAGAGGAAAGTGGTGTATCCATTTGAGTTAGTGAAGCCGGGAGGCATCGACGGGGATATAACCTTAAACGACATAAACGAAAACATGTTGATGCCGCCGACACGGCCAGTCCGACACCCAGTTGGGGATTTCGCGTGTCGGCCGTGCGTGTCGGCGGAGGGACCGGGGCTGTCTGGGAAAGCCGTGGTGGCGCTGACCAAAATCCATACTCGAGGAAGGAGAGGGAGCATCACTATTATTAGAACCAGAGGCTAA ATGAATACTCTCACTGACCTTCACTCACTGCCGTTCTTCAACTCCGCCGTCCACCACCCATCTTCCCCGCCGCCGATTTCCACCGGCTACTTGGAAGATGCCTTCCTGGAATTCACTTCCAAACGACCTCGTTTCGATCACCATCTTCTTCAATTGGAATTCCCTCACACCTACTGGAGTTCCTGTTGCACGTGGGAAGGAGATGCCTTCAATTCCACCAACCAAATCCACCATATCAATCATAATTATGATTATTATTATTATGATACGGTTTCTCCAGATGAAATGTTCGGCGCGTCGCCAAAAAGCAGAATTAGCGACGAAACCAACACAGATCTATCCATGGGAGATATGAAAACGCCAGAAATTGAAGCGTTTTCCACTCCAAATGATTTCTATTATGAACATCAAGCGGATGCTGAGTTTTTGCCTTGCAAGCAGCCAATTTCAACAGATGGTGGCAGTGTAACGAAGAGGCCCAAAAAGAGGAAAGTGGTGTATCCATTTGAGTTAGTGAAGCCGGGAGGCATCGACGGGGATATAACCTTAAACGACATAAACGAAAACATGTTGATGCCGCCGACACGGCCAGTCCGACACCCAGTTGGGGATTTCGCGTGTCGGCCGTGCGTGTCGGCGGAGGGACCGGGGCTGTCTGGGAAAGCCGTGGTGGCGCTGACCAAAATCCATACTCGAGGAAGGAGAGGGAGCATCACTATTATTAGAACCAGAGGCTAA MNTLTDLHSLPFFNSAVHHPSSPPPISTGYLEDAFLEFTSKRPRFDHHLLQLEFPHTYWSSCCTWEGDAFNSTNQIHHINHNYDYYYYDTVSPDEMFGASPKSRISDETNTDLSMGDMKTPEIEAFSTPNDFYYEHQADAEFLPCKQPISTDGGSVTKRPKKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEGPGLSGKAVVALTKIHTRGRRGSITIIRTRG Homology
BLAST of Csor.00g291470 vs. ExPASy Swiss-Prot
Match: Q6NLW5 (Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 3.0e-11 Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 0
BLAST of Csor.00g291470 vs. NCBI nr
Match: XP_022962890.1 (uncharacterized protein LOC111463253 [Cucurbita moschata] >KAG6601903.1 Protein XRI1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 516 bits (1329), Expect = 5.23e-185 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of Csor.00g291470 vs. NCBI nr
Match: KAG7032602.1 (Protein XRI1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 514 bits (1323), Expect = 4.30e-184 Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 0
BLAST of Csor.00g291470 vs. NCBI nr
Match: XP_023549247.1 (uncharacterized protein LOC111807660 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 508 bits (1307), Expect = 1.18e-181 Identity = 242/245 (98.78%), Postives = 242/245 (98.78%), Query Frame = 0
BLAST of Csor.00g291470 vs. NCBI nr
Match: XP_022989840.1 (uncharacterized protein LOC111486907 [Cucurbita maxima]) HSP 1 Score: 489 bits (1258), Expect = 3.64e-174 Identity = 236/246 (95.93%), Postives = 237/246 (96.34%), Query Frame = 0
BLAST of Csor.00g291470 vs. NCBI nr
Match: XP_022146436.1 (uncharacterized protein LOC111015652 [Momordica charantia]) HSP 1 Score: 285 bits (728), Expect = 6.24e-93 Identity = 159/256 (62.11%), Postives = 185/256 (72.27%), Query Frame = 0
BLAST of Csor.00g291470 vs. ExPASy TrEMBL
Match: A0A6J1HGC5 (uncharacterized protein LOC111463253 OS=Cucurbita moschata OX=3662 GN=LOC111463253 PE=4 SV=1) HSP 1 Score: 516 bits (1329), Expect = 2.53e-185 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of Csor.00g291470 vs. ExPASy TrEMBL
Match: A0A6J1JNH2 (uncharacterized protein LOC111486907 OS=Cucurbita maxima OX=3661 GN=LOC111486907 PE=4 SV=1) HSP 1 Score: 489 bits (1258), Expect = 1.76e-174 Identity = 236/246 (95.93%), Postives = 237/246 (96.34%), Query Frame = 0
BLAST of Csor.00g291470 vs. ExPASy TrEMBL
Match: A0A6J1CZC7 (uncharacterized protein LOC111015652 OS=Momordica charantia OX=3673 GN=LOC111015652 PE=4 SV=1) HSP 1 Score: 285 bits (728), Expect = 3.02e-93 Identity = 159/256 (62.11%), Postives = 185/256 (72.27%), Query Frame = 0
BLAST of Csor.00g291470 vs. ExPASy TrEMBL
Match: A0A0A0KMV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1) HSP 1 Score: 253 bits (645), Expect = 9.85e-81 Identity = 152/289 (52.60%), Postives = 183/289 (63.32%), Query Frame = 0
BLAST of Csor.00g291470 vs. ExPASy TrEMBL
Match: A0A5A7VPU6 (Protein XRI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00570 PE=4 SV=1) HSP 1 Score: 241 bits (614), Expect = 2.74e-76 Identity = 143/271 (52.77%), Postives = 175/271 (64.58%), Query Frame = 0
BLAST of Csor.00g291470 vs. TAIR 10
Match: AT1G14630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01990.1); Has 125 Blast hits to 123 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 142.1 bits (357), Expect = 5.8e-34 Identity = 92/222 (41.44%), Postives = 121/222 (54.50%), Query Frame = 0
BLAST of Csor.00g291470 vs. TAIR 10
Match: AT2G01990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14630.1); Has 118 Blast hits to 118 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 135.6 bits (340), Expect = 5.5e-32 Identity = 68/99 (68.69%), Postives = 81/99 (81.82%), Query Frame = 0
BLAST of Csor.00g291470 vs. TAIR 10
Match: AT5G48720.1 (x-ray induced transcript 1 ) HSP 1 Score: 70.5 bits (171), Expect = 2.2e-12 Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 0
BLAST of Csor.00g291470 vs. TAIR 10
Match: AT5G48720.2 (x-ray induced transcript 1 ) HSP 1 Score: 70.5 bits (171), Expect = 2.2e-12 Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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