Csor.00g288540 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g288540
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionProtein kinase domain-containing protein
LocationCsor_Chr04: 18175940 .. 18176302 (+)
RNA-Seq ExpressionCsor.00g288540
SyntenyCsor.00g288540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATCCTCCTTACTCATAGTTTTTGCATCCCTTGCCAGTTTCATCGTCGGAACCGTAGTCCTCTTCTGCGTCTTTTTTCTCTACCAACAAATCAAATCCAAGCATCGAATTACTCGCCACCAGCAACTTCGCAACCGCAATTTGGATCTCTCCTCTGTCACCGTCGATGGAATCGCATCCTTCGATCCTTCACTCTTAGTGGAGGCAAATGTGAAGGAGTATTTTAGGATTGCTTGTTTGTGTACGAGTGAGAAGTCCAAGGAAAGACCTCTTATGTTGAATGTTGTCGAGTTGTTGGATCGGATTATTGACGTGAAGTTGCACGACGACAACGAGTATCAAAATAAGCTTGATGTGTAG

mRNA sequence

ATGCTATCCTCCTTACTCATAGTTTTTGCATCCCTTGCCAGTTTCATCGTCGGAACCGTAGTCCTCTTCTGCGTCTTTTTTCTCTACCAACAAATCAAATCCAAGCATCGAATTACTCGCCACCAGCAACTTCGCAACCGCAATTTGGATCTCTCCTCTGTCACCGTCGATGGAATCGCATCCTTCGATCCTTCACTCTTAGTGGAGGCAAATGTGAAGGAGTATTTTAGGATTGCTTGTTTGTGTACGAGTGAGAAGTCCAAGGAAAGACCTCTTATGTTGAATGTTGTCGAGTTGTTGGATCGGATTATTGACGTGAAGTTGCACGACGACAACGAGTATCAAAATAAGCTTGATGTGTAG

Coding sequence (CDS)

ATGCTATCCTCCTTACTCATAGTTTTTGCATCCCTTGCCAGTTTCATCGTCGGAACCGTAGTCCTCTTCTGCGTCTTTTTTCTCTACCAACAAATCAAATCCAAGCATCGAATTACTCGCCACCAGCAACTTCGCAACCGCAATTTGGATCTCTCCTCTGTCACCGTCGATGGAATCGCATCCTTCGATCCTTCACTCTTAGTGGAGGCAAATGTGAAGGAGTATTTTAGGATTGCTTGTTTGTGTACGAGTGAGAAGTCCAAGGAAAGACCTCTTATGTTGAATGTTGTCGAGTTGTTGGATCGGATTATTGACGTGAAGTTGCACGACGACAACGAGTATCAAAATAAGCTTGATGTGTAG

Protein sequence

MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIASFDPSLLVEANVKEYFRIACLCTSEKSKERPLMLNVVELLDRIIDVKLHDDNEYQNKLDV
Homology
[Close]
BLAST of Csor.00g288540 vs. NCBI nr
Match: KAG6602192.1 (hypothetical protein SDJN03_07425, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228 bits (580), Expect = 6.49e-75
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60
           MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA
Sbjct: 1   MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60

Query: 61  SFDPSLLVEANVKEYFRIACLCTSEKSKERPLMLNVVELLDRIIDVKLHDDNEYQNKLDV 120
           SFDPSLLVEANVKEYFRIACLCTSEKSKERPLMLNVVELLDRIIDVKLHDDNEYQNKLDV
Sbjct: 61  SFDPSLLVEANVKEYFRIACLCTSEKSKERPLMLNVVELLDRIIDVKLHDDNEYQNKLDV 120

[Close]
BLAST of Csor.00g288540 vs. NCBI nr
Match: KAG7032875.1 (Phytosulfokine receptor 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 121 bits (304), Expect = 3.59e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60
          MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA
Sbjct: 1  MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60

Query: 61 SFDPSL 66
          SFDPSL
Sbjct: 61 SFDPSL 66

[Close]
BLAST of Csor.00g288540 vs. NCBI nr
Match: XP_022963746.1 (putative serine/threonine-protein kinase [Cucurbita moschata] >XP_022963756.1 putative serine/threonine-protein kinase [Cucurbita moschata])

HSP 1 Score: 121 bits (303), Expect = 5.02e-30
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60
          MLSSLLIVFASLASFIVGTVVLFC+FFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA
Sbjct: 1  MLSSLLIVFASLASFIVGTVVLFCIFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60

Query: 61 SFDPSL 66
          SFDPSL
Sbjct: 61 SFDPSL 66

[Close]
BLAST of Csor.00g288540 vs. NCBI nr
Match: XP_023535426.1 (leucine-rich repeat receptor protein kinase EMS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118 bits (295), Expect = 7.33e-29
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1  MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60
          MLSS LIVFASLASFIVGT+VLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA
Sbjct: 1  MLSSSLIVFASLASFIVGTLVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60

Query: 61 SFDPSL 66
          SFDPSL
Sbjct: 61 SFDPSL 66

[Close]
BLAST of Csor.00g288540 vs. NCBI nr
Match: XP_022990380.1 (putative serine/threonine-protein kinase [Cucurbita maxima])

HSP 1 Score: 115 bits (288), Expect = 7.62e-28
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60
          MLSSLLIVFASL+SFIVGT+VLFCVFF YQQI SKHRITRHQQLRNRNLDLSSVTVDGIA
Sbjct: 1  MLSSLLIVFASLSSFIVGTLVLFCVFFFYQQITSKHRITRHQQLRNRNLDLSSVTVDGIA 60

Query: 61 SFDPSL 66
          SFDPSL
Sbjct: 61 SFDPSL 66

[Close]
BLAST of Csor.00g288540 vs. ExPASy TrEMBL
Match: A0A6J1HGX6 (putative serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111463952 PE=3 SV=1)

HSP 1 Score: 121 bits (303), Expect = 2.43e-30
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60
          MLSSLLIVFASLASFIVGTVVLFC+FFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA
Sbjct: 1  MLSSLLIVFASLASFIVGTVVLFCIFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60

Query: 61 SFDPSL 66
          SFDPSL
Sbjct: 61 SFDPSL 66

[Close]
BLAST of Csor.00g288540 vs. ExPASy TrEMBL
Match: A0A6J1JPY3 (putative serine/threonine-protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111487254 PE=3 SV=1)

HSP 1 Score: 115 bits (288), Expect = 3.69e-28
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MLSSLLIVFASLASFIVGTVVLFCVFFLYQQIKSKHRITRHQQLRNRNLDLSSVTVDGIA 60
          MLSSLLIVFASL+SFIVGT+VLFCVFF YQQI SKHRITRHQQLRNRNLDLSSVTVDGIA
Sbjct: 1  MLSSLLIVFASLSSFIVGTLVLFCVFFFYQQITSKHRITRHQQLRNRNLDLSSVTVDGIA 60

Query: 61 SFDPSL 66
          SFDPSL
Sbjct: 61 SFDPSL 66

[Close]
BLAST of Csor.00g288540 vs. ExPASy TrEMBL
Match: A0A0A0K8Q1 (Receptor serine-threonine protein kinase OS=Cucumis sativus OX=3659 GN=Csa_6G055410 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.89e-20
Identity = 50/75 (66.67%), Postives = 60/75 (80.00%), Query Frame = 0 

Query: 45  RNRNLDLSSVTVDGIASFDPSLLVEANVKEYFRIACLCTSEKSKERPLMLNVVELLDRII 104
           +NR++++    VD   S D   LVE+NVKEYFRIACLCTSEKSKERP M NVVELLDRI 
Sbjct: 314 QNRHMEM----VDATISNDE--LVESNVKEYFRIACLCTSEKSKERPPMSNVVELLDRIC 373

Query: 105 DVKLHDDNEYQNKLD 119
           D+KL D++EYQ+KLD
Sbjct: 374 DMKLRDNDEYQDKLD 382

[Close]
BLAST of Csor.00g288540 vs. ExPASy TrEMBL
Match: A0A5A7UIA2 (Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001260 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.20e-20
Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 45  RNRNLDLSSVTVDGIASFDPSLLVEANVKEYFRIACLCTSEKSKERPLMLNVVELLDRII 104
           +NR++++    VD   S D   L EANVKEYFRIACLCTSEKS+ERP M NVVELLDRI 
Sbjct: 314 QNRHMEM----VDANISNDE--LAEANVKEYFRIACLCTSEKSRERPPMSNVVELLDRIC 373

Query: 105 DVKLHDDNEYQNKLDV 120
           DVKL +D+EYQ+KLD+
Sbjct: 374 DVKLRNDDEYQDKLDI 383

[Close]
BLAST of Csor.00g288540 vs. ExPASy TrEMBL
Match: A0A1S3B487 (putative serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103485602 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.20e-20
Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 45  RNRNLDLSSVTVDGIASFDPSLLVEANVKEYFRIACLCTSEKSKERPLMLNVVELLDRII 104
           +NR++++    VD   S D   L EANVKEYFRIACLCTSEKS+ERP M NVVELLDRI 
Sbjct: 314 QNRHMEM----VDANISNDE--LAEANVKEYFRIACLCTSEKSRERPPMSNVVELLDRIC 373

Query: 105 DVKLHDDNEYQNKLDV 120
           DVKL +D+EYQ+KLD+
Sbjct: 374 DVKLRNDDEYQDKLDI 383

[Close]
BLAST of Csor.00g288540 vs. TAIR 10
Match: AT5G42440.1 (Protein kinase superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 0 

Query: 69  EANVKEYFRIACLCTSEKSKERPLMLNVVELLDRI 104
           E  V+EYFRIACLC  E ++ERP M+ VVELL+ +
Sbjct: 321 EKGVEEYFRIACLCIKESTRERPTMVQVVELLEEL 355

The following BLAST results are available for this feature:
BLAST of Csor.00g288540 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g288540 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6602192.16.49e-75100.00hypothetical protein SDJN03_07425, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7032875.13.59e-30100.00Phytosulfokine receptor 2, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022963746.15.02e-3098.48putative serine/threonine-protein kinase [Cucurbita moschata] >XP_022963756.1 pu... [more]
XP_023535426.17.33e-2996.97leucine-rich repeat receptor protein kinase EMS1-like [Cucurbita pepo subsp. pep... [more]
XP_022990380.17.62e-2893.94putative serine/threonine-protein kinase [Cucurbita maxima][more]
BLAST of Csor.00g288540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HGX62.43e-3098.48putative serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1JPY33.69e-2893.94putative serine/threonine-protein kinase OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A0A0K8Q13.89e-2066.67Receptor serine-threonine protein kinase OS=Cucumis sativus OX=3659 GN=Csa_6G055... [more]
A0A5A7UIA24.20e-2065.79Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B4874.20e-2065.79putative serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103485602... [more]
BLAST of Csor.00g288540 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G42440.12.5e-0660.00Protein kinase superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g288540.m01Csor.00g288540.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity