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Csor.00g286660 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATGGCTTCCTTTTCATCTACTTGCCTCAGATTCCGCATACCTCTCAACCAAGCTGCCAAGACCAACCAGAACCAGGTATTCTCTGGACATCCCACTCCACTACATATTTATTGCATTCTATGTACAGTTCCCTAAGTGAAATTGATATTATTGTATGCTGCTTCTGGCAATGTCAGGTTCTCAGAAGAAGCTCCGCCGGGGCCGGTGGATTGCTCAAGAGTAATGGTTTCCGTCTTGTCACTCACAGAACCTCCCAATCCCACCTGCGTGTCTCTTGTGCGGTAAGTTCGGTATTTTCATTTGCTAATTAACTCACTTTGCTGTTACCTTTTGTTTGTTGTGTGAATTGAGTTTGAGAGTTAATTGGTAAATTTATGAAATGGAATGGACAGGCAAAACCAGAAACAGTTGATAAGGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAAGCTCAGAGCTCACCCCTGAATCCAAGTTCTCAGCTCTTGGTGCCGACTCCCTCGACACAGTACGCCTTTTCCATAACCTTCCCCAAACAAAACATCACACTAATCTTCTTCATACTTCTGTTTCCCTTATTATATATAATTACGGTTCTGTTCATTGCCCCATTTGACAAAATCAAATATAATGTTGGCATGGCCACAGGTGGAGATTATTATGACCTTGGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACGACAGTACAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAGCAGCAACCTTAA ATGGCAATGGCTTCCTTTTCATCTACTTGCCTCAGATTCCGCATACCTCTCAACCAAGCTGCCAAGACCAACCAGAACCAGGTTCTCAGAAGAAGCTCCGCCGGGGCCGGTGGATTGCTCAAGAGTAATGGTTTCCGTCTTGTCACTCACAGAACCTCCCAATCCCACCTGCGTGTCTCTTGTGCGGCAAAACCAGAAACAGTTGATAAGGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAAGCTCAGAGCTCACCCCTGAATCCAAGTTCTCAGCTCTTGGTGCCGACTCCCTCGACACAGTGGAGATTATTATGACCTTGGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACGACAGTACAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAGCAGCAACCTTAA ATGGCAATGGCTTCCTTTTCATCTACTTGCCTCAGATTCCGCATACCTCTCAACCAAGCTGCCAAGACCAACCAGAACCAGGTTCTCAGAAGAAGCTCCGCCGGGGCCGGTGGATTGCTCAAGAGTAATGGTTTCCGTCTTGTCACTCACAGAACCTCCCAATCCCACCTGCGTGTCTCTTGTGCGGCAAAACCAGAAACAGTTGATAAGGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAAGCTCAGAGCTCACCCCTGAATCCAAGTTCTCAGCTCTTGGTGCCGACTCCCTCGACACAGTGGAGATTATTATGACCTTGGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACGACAGTACAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAGCAGCAACCTTAA MAMASFSSTCLRFRIPLNQAAKTNQNQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQP Homology
BLAST of Csor.00g286660 vs. ExPASy Swiss-Prot
Match: Q9SW21 (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.9e-29 Identity = 80/141 (56.74%), Postives = 99/141 (70.21%), Query Frame = 0
BLAST of Csor.00g286660 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.6e-26 Identity = 62/93 (66.67%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Csor.00g286660 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.5e-26 Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 0
BLAST of Csor.00g286660 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25 Identity = 62/93 (66.67%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of Csor.00g286660 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.7e-25 Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 0
BLAST of Csor.00g286660 vs. NCBI nr
Match: KAG6589346.1 (Acyl carrier protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023033.1 Acyl carrier protein 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 274 bits (700), Expect = 2.08e-92 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of Csor.00g286660 vs. NCBI nr
Match: XP_022987144.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 264 bits (675), Expect = 1.45e-88 Identity = 143/146 (97.95%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Csor.00g286660 vs. NCBI nr
Match: XP_022921630.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 263 bits (673), Expect = 2.92e-88 Identity = 143/146 (97.95%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Csor.00g286660 vs. NCBI nr
Match: XP_023516582.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 262 bits (670), Expect = 8.37e-88 Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Csor.00g286660 vs. NCBI nr
Match: XP_008464386.1 (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl carrier protein [Cucumis melo subsp. melo]) HSP 1 Score: 204 bits (519), Expect = 5.44e-65 Identity = 114/142 (80.28%), Postives = 120/142 (84.51%), Query Frame = 0
BLAST of Csor.00g286660 vs. ExPASy TrEMBL
Match: A0A6J1JI20 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111484784 PE=3 SV=1) HSP 1 Score: 264 bits (675), Expect = 7.00e-89 Identity = 143/146 (97.95%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Csor.00g286660 vs. ExPASy TrEMBL
Match: A0A6J1E6C1 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111429833 PE=3 SV=1) HSP 1 Score: 263 bits (673), Expect = 1.41e-88 Identity = 143/146 (97.95%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Csor.00g286660 vs. ExPASy TrEMBL
Match: E5GBM2 (Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 204 bits (519), Expect = 2.63e-65 Identity = 114/142 (80.28%), Postives = 120/142 (84.51%), Query Frame = 0
BLAST of Csor.00g286660 vs. ExPASy TrEMBL
Match: A0A1S3CLC5 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103502288 PE=3 SV=1) HSP 1 Score: 204 bits (519), Expect = 2.63e-65 Identity = 114/142 (80.28%), Postives = 120/142 (84.51%), Query Frame = 0
BLAST of Csor.00g286660 vs. ExPASy TrEMBL
Match: A0A0A0LNR6 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G000670 PE=3 SV=1) HSP 1 Score: 198 bits (504), Expect = 5.07e-63 Identity = 110/142 (77.46%), Postives = 119/142 (83.80%), Query Frame = 0
BLAST of Csor.00g286660 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 ) HSP 1 Score: 130.2 bits (326), Expect = 1.4e-30 Identity = 80/141 (56.74%), Postives = 99/141 (70.21%), Query Frame = 0
BLAST of Csor.00g286660 vs. TAIR 10
Match: AT4G25050.2 (acyl carrier protein 4 ) HSP 1 Score: 121.3 bits (303), Expect = 6.3e-28 Identity = 80/153 (52.29%), Postives = 99/153 (64.71%), Query Frame = 0
BLAST of Csor.00g286660 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 ) HSP 1 Score: 111.7 bits (278), Expect = 5.0e-25 Identity = 58/93 (62.37%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of Csor.00g286660 vs. TAIR 10
Match: AT1G54630.1 (acyl carrier protein 3 ) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24 Identity = 57/93 (61.29%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of Csor.00g286660 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 ) HSP 1 Score: 100.5 bits (249), Expect = 1.2e-21 Identity = 64/137 (46.72%), Postives = 84/137 (61.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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