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Csor.00g286580 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATCCATCACTCAAGAAGATGATGGACTTCGCTCGCGTGCAAAAGGAACTCCAAGAATGCACTAAGGACATTGAGGCTTCAGGTATTAGAGTCACCCCCAAAGCCGATAATCTTTCCCACTTGATCGGCACCATTCCTGGTCCTGTCGCTACTCCTTACGAAGGCGGCACCTTCCAAATTGACATCACCTTGCCAGGTCCCTCTAATTACTCCCTCCTTTTCTTCTTTCACTTACTCTTTCTTTCCTCGCCTCCATTTGAATGCTCCCACTCAGATTAGCATTAGGGTTTTCGAGTAAGTACGTCTGTTATTTTTTTATTTATTTTATGTGATTAGCTGACGATAAAGAATCTGCGTTGTGGTGTCTGAGGCATTAGGGCTTGAATCTATGATTGGAAATTACCTCTGGCAAGTTCATGATTTTGGAATAATAAATTATAATTTCAGCTGTCCTCCACGAAAAAAAAAAAAGAAAGAAAGAAAGAGAGAGAGAGGAAAAAAACATGTTCTGTAGAAGAGCGATGTGTTTCATCGATTTTTTGTTTTACACGGCATAGAACTGTTAAACTGTTCTCTAACAGTCCACACTAGCTCCCTTTACGGCTGTTTCTTTCAAGTTTTTTTTTTAGTTAAAACTATGTATTCAGCCCTCGTGCGTTTTTTGTTCACTTCCAGTTGTTCTGTTACACATTTTTGCTGTAAAAAATAAAAGAGAGGGAAACAGATGAGAGTTTTTTAGTTTTATCGATCCCGTTTATAGAAAACAATTCTGTTACGCGCTTGAGGCATATTTAAAATCACTCCTCGGTAAGAGCTTTGTTGGGAGAACCATTCCTTGCTCTATTGAATATTTATGGTAAAGGATTGTATATTGTCCGAGTGTGTTCCATGACCTCTTAACATGTTCCCCGAGTTTTTATAATATTGCTTTACCTTTTTAGCTGGCGGCTTTCTATAATTGCTATCAGTGAAGCCTTTGTTACAATGTTATCTAAAGTGTAAGGACTAAAGTGCAATAGCCCTCTCAATGAGGAATGTTGTTTGTGAGGCACACAATAGAAAAATTGTGTATTATGCATAATATGATGGTGAAAATTGTAACACAATAGAGCTTTTGAGAGTTTGTTTAAGGAAATGATGAATTTTGGAGGATATTTTTTGGCTTCAAAAATTAAAAATGTTGATGCTTCATGGCATGCGCTTCAGTGAGGACTTCATTCATGGAAAACTTGCCTAAGCACGCTTTCAAAACATTGTTTTTATCTTAACCCTTATCATGTATCTTATACGTGGGTTTTCCCCCCTTGCAGATGGGTATCCATTTGAGCCGCCCAAAATGCAGTTTGCTACAAAAGTCTGGTAAGGACAATATATGCATGGCTTCCTTTCTTGTTATGCCTGCCGAGCAGATAATGTCGCGATTTCTTAGGTGCGCACAGAGCGTGTCTGCGTTTAGTGGATGGAGTTGCTTTCCAGAGAACATGCAGATGTTTTCTTGATCTATTCAAAATAATAGTTTTGTTTTTGGATGTGGAGATTTGGAGGTCATCAATTGTGGATATGATGTTGCAATTTTCATTCAACACGTTGACATTGCTATGCATTCTGAATTTTTTCTAAAATGTTTTTACCATGAAGGAGTTTGTGACTTAATGTTATTGATCTAGTTCAATATATGTATATGAGATTATGCTGAAGCTTTGGAGTTTTGTTTGGTCTATTATGTTGTGAAGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATTTGCCTGGACATTCTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAGGCGTTGCTCTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTGGTGGCACAACAGGTATTGTTAAGTCTATCTTCACTGCATGGATGTTGGTTGTTTTTTGTTTTCAGATGTTGGTATTGAAGATATGAAGTTTAGATCCTATCAAAAGCGATATTAAGTTTAATATGTCCGAACACATATTGGTGCAGTATCTTAGAGACTACCAGACTTTTGCTGGCACAGCTCGATACTGGACAGAAACTTTTGCCAAGACGTCATCACTTGGAGTGGAAGAAAAGGTTAAAGCCTTAGCTTTAGTTTTGCATGTTGCGTGCATGATAAATCATATATAGTTTTGTGTTTGAGGAGTAGTTCTTTTGTTACGGTGGAGAATGAAAGCGTGTGCACCGAAACTTGATGTGAAGGAAATATTGCAGGTTCAGAAGCTTGTGGAGATGGGATTCCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGATGGGATGAAAATTTGGCCTTGGAAAAGCTCTGCTCCGGCTAA ATGTATCCATCACTCAAGAAGATGATGGACTTCGCTCGCGTGCAAAAGGAACTCCAAGAATGCACTAAGGACATTGAGGCTTCAGGTATTAGAGTCACCCCCAAAGCCGATAATCTTTCCCACTTGATCGGCACCATTCCTGGTCCTGTCGCTACTCCTTACGAAGGCGGCACCTTCCAAATTGACATCACCTTGCCAGATGGGTATCCATTTGAGCCGCCCAAAATGCAGTTTGCTACAAAAGTCTGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATTTGCCTGGACATTCTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAGGCGTTGCTCTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTGGTGGCACAACAGTATCTTAGAGACTACCAGACTTTTGCTGGCACAGCTCGATACTGGACAGAAACTTTTGCCAAGACGTCATCACTTGGAGTGGAAGAAAAGGTTCAGAAGCTTGTGGAGATGGGATTCCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGATGGGATGAAAATTTGGCCTTGGAAAAGCTCTGCTCCGGCTAA ATGTATCCATCACTCAAGAAGATGATGGACTTCGCTCGCGTGCAAAAGGAACTCCAAGAATGCACTAAGGACATTGAGGCTTCAGGTATTAGAGTCACCCCCAAAGCCGATAATCTTTCCCACTTGATCGGCACCATTCCTGGTCCTGTCGCTACTCCTTACGAAGGCGGCACCTTCCAAATTGACATCACCTTGCCAGATGGGTATCCATTTGAGCCGCCCAAAATGCAGTTTGCTACAAAAGTCTGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATTTGCCTGGACATTCTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAGGCGTTGCTCTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTGGTGGCACAACAGTATCTTAGAGACTACCAGACTTTTGCTGGCACAGCTCGATACTGGACAGAAACTTTTGCCAAGACGTCATCACTTGGAGTGGAAGAAAAGGTTCAGAAGCTTGTGGAGATGGGATTCCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGATGGGATGAAAATTTGGCCTTGGAAAAGCTCTGCTCCGGCTAA MYPSLKKMMDFARVQKELQECTKDIEASGIRVTPKADNLSHLIGTIPGPVATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGWDENLALEKLCSG Homology
BLAST of Csor.00g286580 vs. ExPASy Swiss-Prot
Match: Q9FI61 (Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana OX=3702 GN=UBC27 PE=2 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 5.3e-86 Identity = 151/193 (78.24%), Postives = 177/193 (91.71%), Query Frame = 0
BLAST of Csor.00g286580 vs. ExPASy Swiss-Prot
Match: P52484 (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans OX=6239 GN=ubc-21 PE=3 SV=3) HSP 1 Score: 186.8 bits (473), Expect = 2.4e-46 Identity = 94/190 (49.47%), Postives = 124/190 (65.26%), Query Frame = 0
BLAST of Csor.00g286580 vs. ExPASy Swiss-Prot
Match: P61085 (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus OX=9913 GN=UBE2K PE=1 SV=3) HSP 1 Score: 185.7 bits (470), Expect = 5.3e-46 Identity = 96/192 (50.00%), Postives = 127/192 (66.15%), Query Frame = 0
BLAST of Csor.00g286580 vs. ExPASy Swiss-Prot
Match: P61086 (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens OX=9606 GN=UBE2K PE=1 SV=3) HSP 1 Score: 185.7 bits (470), Expect = 5.3e-46 Identity = 96/192 (50.00%), Postives = 127/192 (66.15%), Query Frame = 0
BLAST of Csor.00g286580 vs. ExPASy Swiss-Prot
Match: P61087 (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus OX=10090 GN=Ube2k PE=1 SV=3) HSP 1 Score: 185.7 bits (470), Expect = 5.3e-46 Identity = 96/192 (50.00%), Postives = 127/192 (66.15%), Query Frame = 0
BLAST of Csor.00g286580 vs. NCBI nr
Match: XP_023515392.1 (ubiquitin-conjugating enzyme E2 27 [Cucurbita pepo subsp. pepo] >KAG6589354.1 Ubiquitin-conjugating enzyme E2 27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023040.1 Ubiquitin-conjugating enzyme E2 27 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 405 bits (1042), Expect = 1.02e-142 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Csor.00g286580 vs. NCBI nr
Match: XP_022921627.1 (ubiquitin-conjugating enzyme E2 27 [Cucurbita moschata] >XP_022921628.1 ubiquitin-conjugating enzyme E2 27 [Cucurbita moschata]) HSP 1 Score: 405 bits (1040), Expect = 2.06e-142 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Csor.00g286580 vs. NCBI nr
Match: XP_022988308.1 (ubiquitin-conjugating enzyme E2 27 [Cucurbita maxima]) HSP 1 Score: 403 bits (1036), Expect = 8.41e-142 Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Csor.00g286580 vs. NCBI nr
Match: XP_008464378.1 (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis melo] >KAA0057744.1 ubiquitin-conjugating enzyme E2 27 [Cucumis melo var. makuwa] >TYJ98427.1 ubiquitin-conjugating enzyme E2 27 [Cucumis melo var. makuwa]) HSP 1 Score: 384 bits (987), Expect = 1.94e-134 Identity = 187/194 (96.39%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Csor.00g286580 vs. NCBI nr
Match: XP_022135200.1 (ubiquitin-conjugating enzyme E2 27 [Momordica charantia]) HSP 1 Score: 384 bits (985), Expect = 3.92e-134 Identity = 189/194 (97.42%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of Csor.00g286580 vs. ExPASy TrEMBL
Match: A0A6J1E113 (E2 ubiquitin-conjugating enzyme OS=Cucurbita moschata OX=3662 GN=LOC111429831 PE=3 SV=1) HSP 1 Score: 405 bits (1040), Expect = 1.00e-142 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Csor.00g286580 vs. ExPASy TrEMBL
Match: A0A6J1JLX8 (E2 ubiquitin-conjugating enzyme OS=Cucurbita maxima OX=3661 GN=LOC111485596 PE=3 SV=1) HSP 1 Score: 403 bits (1036), Expect = 4.07e-142 Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Csor.00g286580 vs. ExPASy TrEMBL
Match: A0A5A7URI8 (E2 ubiquitin-conjugating enzyme OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00250 PE=3 SV=1) HSP 1 Score: 384 bits (987), Expect = 9.40e-135 Identity = 187/194 (96.39%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Csor.00g286580 vs. ExPASy TrEMBL
Match: A0A1S3CLG3 (E2 ubiquitin-conjugating enzyme OS=Cucumis melo OX=3656 GN=LOC103502281 PE=3 SV=1) HSP 1 Score: 384 bits (987), Expect = 9.40e-135 Identity = 187/194 (96.39%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Csor.00g286580 vs. ExPASy TrEMBL
Match: A0A6J1C0H8 (E2 ubiquitin-conjugating enzyme OS=Momordica charantia OX=3673 GN=LOC111007221 PE=3 SV=1) HSP 1 Score: 384 bits (985), Expect = 1.90e-134 Identity = 189/194 (97.42%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of Csor.00g286580 vs. TAIR 10
Match: AT5G50870.1 (ubiquitin-conjugating enzyme 27 ) HSP 1 Score: 318.5 bits (815), Expect = 3.7e-87 Identity = 151/193 (78.24%), Postives = 177/193 (91.71%), Query Frame = 0
BLAST of Csor.00g286580 vs. TAIR 10
Match: AT5G50870.2 (ubiquitin-conjugating enzyme 27 ) HSP 1 Score: 310.1 bits (793), Expect = 1.3e-84 Identity = 151/204 (74.02%), Postives = 177/204 (86.76%), Query Frame = 0
BLAST of Csor.00g286580 vs. TAIR 10
Match: AT5G41700.4 (ubiquitin conjugating enzyme 8 ) HSP 1 Score: 143.3 bits (360), Expect = 2.2e-34 Identity = 71/144 (49.31%), Postives = 94/144 (65.28%), Query Frame = 0
BLAST of Csor.00g286580 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 ) HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33 Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 0
BLAST of Csor.00g286580 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 ) HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33 Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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