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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGTTTTGCACCGTGTGATTGGGTTAGAAATGTGATGGGGATGAGCACCATGAAGTGCGATTACACATCAAAAGAGCGTGGGAGGGAGAGAAGAGAATCTCTGGGTAAATCTGGGAATGAAAGGAAGATGCGAGGGGGGGGCAAGTTGAGCAAGTGGGAATTTTAATTCATTTTATTTTTCTAATTTAATTTAATTTAATTTAATTTAATTTAATTTTATTTAATTTAATTTAATTTTATTTTATTTGTTGAATGAGGAGTTGCAGTGAAGAAAGAAGCTGGCACGTTTATATAGATCCAATTAAACTGAATTTATAGCAGAGCCTGGTGGTGTTCCGTAGCAGAATAACAACCAAAAAAGTGGCTACTTAGTTTTTGTCGCTAAATTAATAGTTGTTGTTACTTAGGCTTTGCTTCTCCCCGACTCTCATCTCCCCGGTAGTGCTCCCCATACACATTATTACCAATATTTCCCCATTCAATTCTAACACATTATTACCAATATTTCCCCATTCAATTCTATGTTATCTTCAAATTTATCTTTCCACAATGCAAATAAACCACACAACGCCTCATCACTTGCCCTCTGCCTGCTCAAACCACCAGATGCTTAGCTTGCTCAATCCACACTTTCTCATATTTATGCATCTACAACTCCACTTGCCATACTCTAATTTAGAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGATGTAACATATGATGTGGATCAGATGAGTGGCTCATGGGGTAGCTACCTAGCTGTAATCAATTATTTTTGAGTTTGAATTGTTTTGTATTGTATTGTATTGTAATATCCAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGGTGGGGGAAGGGGATTTAGTTTCCAACGGAGGCCTTAA mRNA sequence ATGGGTTTTGCACCGTGTGATTGGGTTAGAAATGTGATGGGGATGAGCACCATGAAGTGCGATTACACATCAAAAGAGCGTGGGAGGGAGAGAAGAGAATCTCTGGGTAAATCTGGGAATGAAAGGAAGATGCGAGGGGGGGGCAAGTTGAGCAAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGGTGGGGGAAGGGGATTTAGTTTCCAACGGAGGCCTTAA Coding sequence (CDS) ATGGGTTTTGCACCGTGTGATTGGGTTAGAAATGTGATGGGGATGAGCACCATGAAGTGCGATTACACATCAAAAGAGCGTGGGAGGGAGAGAAGAGAATCTCTGGGTAAATCTGGGAATGAAAGGAAGATGCGAGGGGGGGGCAAGTTGAGCAAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGGTGGGGGAAGGGGATTTAGTTTCCAACGGAGGCCTTAA Protein sequence MGFAPCDWVRNVMGMSTMKCDYTSKERGRERRESLGKSGNERKMRGGGKLSKVVVVVVVVVVVVVVVVVEGGGRGFSFQRRP
Homology
BLAST of Csor.00g286530 vs. NCBI nr
Match: KAG6589359.1 (hypothetical protein SDJN03_14782, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 160 bits (405), Expect = 2.04e-49 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 Query: 1 MGFAPCDWVRNVMGMSTMKCDYTSKERGRERRESLGKSGNERKMRGGGKLSKVVVVVVVV 60 MGFAPCDWVRNVMGMSTMKCDYTSKERGRERRESLGKSGNERKMRGGGKLSKVVVVVVVV Sbjct: 1 MGFAPCDWVRNVMGMSTMKCDYTSKERGRERRESLGKSGNERKMRGGGKLSKVVVVVVVV 60
Query: 61 VVVVVVVVVEGGGRGFSFQRRP 82 VVVVVVVVVEGGGRGFSFQRRP Sbjct: 61 VVVVVVVVVEGGGRGFSFQRRP 82
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6589359.1 | 2.04e-49 | 100.00 | hypothetical protein SDJN03_14782, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 23..45 |
Relationships
The following mRNA feature(s) are a part of this gene:
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