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Csor.00g286490 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCTGAACCCTGCGACGTCATGCAAATTTCGAACCGAACCGAACCGAACCGAGATAAGCACAGGTAACTGACGTGACATAAAGTCAAGACCGCGTCGATTTTAGAATCGGTCTGGCTTGGAGTTGTGCCTTCGCGGGCGCTTAGTTTGGCTTCTTCCTCACTTCAACAACTTCAATAATATTTATAAATTCATAATTTGAGAAAGAAATATACACATTGGGTTAATATTCTTCTTCCCAAAAAGCCTGCAGCCGGGAGGAAAAACTGCCTTGGCCTGATCGACGCCTTCACAAGGTCTCTTCTCTCCTCTTAATTCTCGTTTTTTCTTCACTTTATCCACAATTACTCTCCTTTTCGGATCTTTCATGGTGTTCGCACTTGTAATTGCTCCAGCTTCGTTGCTGTTGGAATTGCTTTCAGTTCCTTCTAGGGCATCCGATCAATTCAAGGTCGGGATCCAACACTTGTACCTGATTTGAGGATACTCAACTCAGATGCCGGAGGACGATTTTATTGACATTAAGTTCAGGCTCTACGATGGTTCTGATATTGGACCCTTTCGATACTCGTCCGCATCGACAATAGATGTGCTCAAGCAGAGAATAGTGTCCGATTGGCCCAAAGGTTCGAAATTTACTCTTCAGCTTCACCCTAATCTTTTCAGCTATGAGTACACAATTTGCAATCGGCATTTTTTTTTTTAATTTTTTTTTTTATATATATATATGCTTTTCTCCTGCAAACGCGTATGTGAATCTCGGGCGTTAATATTGCATGTTCTATAGTTAGTCAATCCTTCTTTTTTAATACTATAGTCTACTAGCTTAAGAGAGCTATTTTTAGGACTAAATATTTTATTCTTGGCAATCCTTCTTTTTTATACGTCGTTTTGTTATTCTTGATTTACGCGGTCATTCGGAGGACGCACATTGAATCTTTTGTTGTGTGCCGTTTTACTGTTAGGAACTCATGCTTGTATTTTCGGTTTCTTAAGAATTGTCTTCGTTCACTGGACGAATTATCATTTTTCTTTTCTCTGCTTTTGTTTTCATATTGATTTTTTTTTTTTTTTTCCTTTTGGGATGATTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTCGTTTTTAGGCAAAACAATCATTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGAAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTCCACGGGAGGAGTCACCATAATGCATGTTGTTGTACAGCCATCCCTAGCGAAAGCTAAGACAGGTGATTTCCTTTGAGGTTTTATCTATAAATATAGTTTTCTTGGTCATTGATTGTTCCCTTTACAATTCAACTTCAATATTGTTTTCTTTCCCCCTTTCTCCAATGCCCCATAGTTTTTCACGTACTCTGGATTTATACGACAAGTCTATATAATTGTGGTCTTAGGAGTTGGAATCGCATTCTCAACTGATACAGTCATCAAATTGTTGGTTTTTTTGGCTTGAACTTAGGAGAATACTCATCTGATTCTAATTCTTAACAACCATTTTTGTTACACTTACTGGAGTTAGTGGGATATAACAATTTCAAAATCCTTATTCTGCTTTCAATGAGTTTTGACTAGTACTTTTGAGTTGTAACTTGAACTGTGCTAACGAGAAAGCCGAATCTTAGCATGCAGTCCCATGAGTTATATCATGAGCCTCTTAGAGAACCTTCATTCTTCATTTATTTCTTCTCCAGATTTTATCCTGTTTTTTTTTTTTTTTTTTTTTCTATCCCGTCCTCAACTATTGTTTGTGGCTTTTAAATGAAGAAGGGTGTTCTAGTCCCCTCTTTGGGTGGTTAGGATATGCTAGCAGGTTGTATCCATTTCACGAAGTTAGAGCCGTATGATCATCTTATTGACTATTACTCCCTTACAAAGTATGCAGGGAGAAGTAATCCATGGTTGGCCATGGGTTGGCCTGTGTAAATAATGAAAAGCTTAAAGGGCATGGGTTGTAATTTCCTGATTTAATTTCCTACAAGTTACCTTGGTAAACAAATGTAGTAAGGTAGGCAATTGTGCCGTGAGAATGGTCGAGATGTTTACAAGTTGGCCCAAACACTCGCAAGTATAAAAGAACTAGAGGGCTTAGCTGGTCTATTATTCTTCTCTGTCAGTAAAGATAAAATTTCCTGTCAACCCCGCAAATTTAACTAATCACCTTGGAAATCTAATGGCAAATTACTATATAGTACAGATGTTGGATGAAGTTTGAGGTTTGTTGCAAATGTGTGAACAATAGTCTTCTTCCTATTCTTCTGTTGAGGAATGTCTGCGCGGAACAAAGGGATTTGTTGAGTGTCTGGCCTAAATATGAAAACATACATCGTTCTACCTCTCTAAAGCTAAGATGCTCTTGCATAACCCCTGACTGAGGATTCAGATTTATACCCTTAACCACTCTTTGTATTCTCATGATTTTTCCCTTTTCTTTACTCTTGCTTCTTCTTCCCTCTTCGTTGTTTTCCTATCATTTATCTTTTCCTTTTCGTCTTCTACTAATCATTGGAAAATATAACATAAGCTAGAGAAGAAAGAACTTGGATTGTTGTAAGGGCCGATAAAAATCCAAAAAATCTCAAATCTTCCAATTGTAACAGCCTAAGCTCACCAGTAGCAAATATTGTCGTCTCTAGACTTTCCCTCAAGGTTTTTAAAACGCATCATGCTAGGGAGAGATTTCCACACTCTTGTAAAGAATGTTTTGTTCCCCTCTCCAACTAATGTGGGATCTCAAAACCCACCCCATGTGGGCCAGCGTCCTCGCTAGCACTCCTTCACCTCTTCACCTCTCCAATAGAATGTGCTAAGTGTTACTTGTTTTAATTCAATTCTATGTGACTGCAGTGTTTCTCTAGTCAAACTTGAATGTGGTCCTTAAATCATAACCTTGGAGAACTTGTGGCCGTTGATAGAATTTGTTTTTTATGAGTCTGGTATTTTTTTGCTGTTCTATGAAATATTTACTTCGATATGTTGATGGTACAGAGAAAAAGACTGACAATTCACAACAGAAGATCGTCTGCTCCTGTTCCATACTTTGA ATGGATGCTGAACCCTGCGACGTCATGCAAATTTCGAACCGAACCGAACCGAACCGAGATAAGCACAGCCGGGAGGAAAAACTGCCTTGGCCTGATCGACGCCTTCACAAGCTTCGTTGCTGTTGGAATTGCTTTCAGTTCCTTCTAGGGCATCCGATCAATTCAAGGCTCTACGATGGTTCTGATATTGGACCCTTTCGATACTCGTCCGCATCGACAATAGATGTGCTCAAGCAGAGAATAGTGTCCGATTGGCCCAAAGGCAAAACAATCATTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGAAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTCCACGGGAGGAGTCACCATAATGCATGTTGTTGTACAGCCATCCCTAGCGAAAGCTAAGACAGAGAAAAAGACTGACAATTCACAACAGAAGATCGTCTGCTCCTGTTCCATACTTTGA ATGGATGCTGAACCCTGCGACGTCATGCAAATTTCGAACCGAACCGAACCGAACCGAGATAAGCACAGCCGGGAGGAAAAACTGCCTTGGCCTGATCGACGCCTTCACAAGCTTCGTTGCTGTTGGAATTGCTTTCAGTTCCTTCTAGGGCATCCGATCAATTCAAGGCTCTACGATGGTTCTGATATTGGACCCTTTCGATACTCGTCCGCATCGACAATAGATGTGCTCAAGCAGAGAATAGTGTCCGATTGGCCCAAAGGCAAAACAATCATTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGAAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTCCACGGGAGGAGTCACCATAATGCATGTTGTTGTACAGCCATCCCTAGCGAAAGCTAAGACAGAGAAAAAGACTGACAATTCACAACAGAAGATCGTCTGCTCCTGTTCCATACTTTGA MDAEPCDVMQISNRTEPNRDKHSREEKLPWPDRRLHKLRCCWNCFQFLLGHPINSRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTIIPKAASEVKLISSGKILENNKTVGQCKLPFGESTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL Homology
BLAST of Csor.00g286490 vs. ExPASy Swiss-Prot
Match: Q9SW27 (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.1e-44 Identity = 82/110 (74.55%), Postives = 97/110 (88.18%), Query Frame = 0
BLAST of Csor.00g286490 vs. ExPASy Swiss-Prot
Match: Q9LSD8 (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.5e-30 Identity = 63/109 (57.80%), Postives = 83/109 (76.15%), Query Frame = 0
BLAST of Csor.00g286490 vs. ExPASy Swiss-Prot
Match: Q7XRU4 (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2) HSP 1 Score: 131.3 bits (329), Expect = 9.6e-30 Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of Csor.00g286490 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23 Identity = 49/110 (44.55%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of Csor.00g286490 vs. ExPASy Swiss-Prot
Match: Q8LCS8 (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MUB2 PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.9e-23 Identity = 54/110 (49.09%), Postives = 70/110 (63.64%), Query Frame = 0
BLAST of Csor.00g286490 vs. NCBI nr
Match: KAG6589363.1 (Membrane-anchored ubiquitin-fold protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 335 bits (860), Expect = 2.97e-116 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Csor.00g286490 vs. NCBI nr
Match: XP_022921410.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita moschata] >XP_022921411.1 membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita moschata] >XP_022921412.1 membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita moschata] >KAG7023048.1 Membrane-anchored ubiquitin-fold protein 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214 bits (545), Expect = 7.12e-69 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Csor.00g286490 vs. NCBI nr
Match: XP_023516373.1 (membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_023516374.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212 bits (540), Expect = 4.11e-68 Identity = 107/110 (97.27%), Postives = 107/110 (97.27%), Query Frame = 0
BLAST of Csor.00g286490 vs. NCBI nr
Match: XP_022988440.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima] >XP_022988441.1 membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima] >XP_022988442.1 membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 211 bits (537), Expect = 1.18e-67 Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0
BLAST of Csor.00g286490 vs. NCBI nr
Match: XP_008464397.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464399.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464400.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464401.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_016903199.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_022932632.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022932642.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022974355.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_022974363.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_023531895.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_023531896.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_038879256.1 membrane-anchored ubiquitin-fold protein 3-like [Benincasa hispida] >KAG6587397.1 Membrane-anchored ubiquitin-fold protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 210 bits (534), Expect = 3.37e-67 Identity = 106/110 (96.36%), Postives = 106/110 (96.36%), Query Frame = 0
BLAST of Csor.00g286490 vs. ExPASy TrEMBL
Match: A0A6J1E1B5 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111429700 PE=4 SV=1) HSP 1 Score: 214 bits (545), Expect = 3.44e-69 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Csor.00g286490 vs. ExPASy TrEMBL
Match: A0A6J1JD14 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111485689 PE=4 SV=1) HSP 1 Score: 211 bits (537), Expect = 5.70e-68 Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0
BLAST of Csor.00g286490 vs. ExPASy TrEMBL
Match: A0A6J1IG02 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111472981 PE=4 SV=1) HSP 1 Score: 210 bits (534), Expect = 1.63e-67 Identity = 106/110 (96.36%), Postives = 106/110 (96.36%), Query Frame = 0
BLAST of Csor.00g286490 vs. ExPASy TrEMBL
Match: A0A1S3CMX7 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103502298 PE=4 SV=1) HSP 1 Score: 210 bits (534), Expect = 1.63e-67 Identity = 106/110 (96.36%), Postives = 106/110 (96.36%), Query Frame = 0
BLAST of Csor.00g286490 vs. ExPASy TrEMBL
Match: A0A6J1EXB1 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111439129 PE=4 SV=1) HSP 1 Score: 210 bits (534), Expect = 1.63e-67 Identity = 106/110 (96.36%), Postives = 106/110 (96.36%), Query Frame = 0
BLAST of Csor.00g286490 vs. TAIR 10
Match: AT4G24990.1 (Ubiquitin family protein ) HSP 1 Score: 181.0 bits (458), Expect = 7.5e-46 Identity = 82/110 (74.55%), Postives = 97/110 (88.18%), Query Frame = 0
BLAST of Csor.00g286490 vs. TAIR 10
Match: AT3G26980.1 (membrane-anchored ubiquitin-fold protein 4 precursor ) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31 Identity = 63/109 (57.80%), Postives = 83/109 (76.15%), Query Frame = 0
BLAST of Csor.00g286490 vs. TAIR 10
Match: AT5G15460.1 (membrane-anchored ubiquitin-fold protein 2 ) HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24 Identity = 54/110 (49.09%), Postives = 70/110 (63.64%), Query Frame = 0
BLAST of Csor.00g286490 vs. TAIR 10
Match: AT5G15460.2 (membrane-anchored ubiquitin-fold protein 2 ) HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24 Identity = 54/110 (49.09%), Postives = 70/110 (63.64%), Query Frame = 0
BLAST of Csor.00g286490 vs. TAIR 10
Match: AT1G77870.1 (membrane-anchored ubiquitin-fold protein 5 precursor ) HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22 Identity = 53/109 (48.62%), Postives = 72/109 (66.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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