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Csor.00g286380 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAGCAAGAGCCAATCCACTTCCCTGATAAACACGACATCTATCCCGGAGCATCGTCGAACGATAGCATCCATAAAATTGAAAAGAACTCCAAGTCCAGGCCATGAATCGGATTGTGCTCTCTCTCTTCTGTCATCTTTGCAGACACAGTCATCCGGGATCGGTTTCAACCAAGCCGAGCAGGACCGTCATCTTATATCCTTCCTGCAGCCATTAGATGTGAGCTTAGGACATCACAACAGGTTGGAGACAGCTAGTTCAGTACTGAATGGCTGTGTGAGTAATGCTGATATGAATTGCTCAGGAATGTTTCACGCTGCATCGAATGATGGAGGGAATGAAGCTCCCCCACCATCCCTTCCCTTTCACTGGCAGTAG ATGTTCAGCAAGAGCCAATCCACTTCCCTGATAAACACGACATCTATCCCGGAGCATCGTCGAACGATAGCATCCATAAAATTGAAAAGAACTCCAAGTCCAGGCCATGAATCGGATTGTGCTCTCTCTCTTCTGTCATCTTTGCAGACACAGTCATCCGGGATCGGTTTCAACCAAGCCGAGCAGGACCGTCATCTTATATCCTTCCTGCAGCCATTAGATGTGAGCTTAGGACATCACAACAGGTTGGAGACAGCTAGTTCAGTACTGAATGGCTGTGTGAGTAATGCTGATATGAATTGCTCAGGAATGTTTCACGCTGCATCGAATGATGGAGGGAATGAAGCTCCCCCACCATCCCTTCCCTTTCACTGGCAGTAG ATGTTCAGCAAGAGCCAATCCACTTCCCTGATAAACACGACATCTATCCCGGAGCATCGTCGAACGATAGCATCCATAAAATTGAAAAGAACTCCAAGTCCAGGCCATGAATCGGATTGTGCTCTCTCTCTTCTGTCATCTTTGCAGACACAGTCATCCGGGATCGGTTTCAACCAAGCCGAGCAGGACCGTCATCTTATATCCTTCCTGCAGCCATTAGATGTGAGCTTAGGACATCACAACAGGTTGGAGACAGCTAGTTCAGTACTGAATGGCTGTGTGAGTAATGCTGATATGAATTGCTCAGGAATGTTTCACGCTGCATCGAATGATGGAGGGAATGAAGCTCCCCCACCATCCCTTCCCTTTCACTGGCAGTAG MFSKSQSTSLINTTSIPEHRRTIASIKLKRTPSPGHESDCALSLLSSLQTQSSGIGFNQAEQDRHLISFLQPLDVSLGHHNRLETASSVLNGCVSNADMNCSGMFHAASNDGGNEAPPPSLPFHWQ Homology
BLAST of Csor.00g286380 vs. NCBI nr
Match: KAG6589374.1 (hypothetical protein SDJN03_14797, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 252 bits (644), Expect = 1.75e-84 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Csor.00g286380 vs. NCBI nr
Match: XP_023515631.1 (squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo] >XP_023515632.1 squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo] >XP_023515633.1 squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo] >XP_023515634.1 squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 199 bits (505), Expect = 5.00e-60 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Csor.00g286380 vs. NCBI nr
Match: KAG7023055.1 (Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 198 bits (504), Expect = 8.04e-60 Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Csor.00g286380 vs. NCBI nr
Match: XP_022921420.1 (squamosa promoter-binding-like protein 13A [Cucurbita moschata] >XP_022921421.1 squamosa promoter-binding-like protein 13A [Cucurbita moschata] >XP_022921422.1 squamosa promoter-binding-like protein 13A [Cucurbita moschata]) HSP 1 Score: 196 bits (497), Expect = 7.96e-59 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Csor.00g286380 vs. NCBI nr
Match: XP_022988498.1 (squamosa promoter-binding-like protein 13A [Cucurbita maxima] >XP_022988499.1 squamosa promoter-binding-like protein 13A [Cucurbita maxima] >XP_022988500.1 squamosa promoter-binding-like protein 13A [Cucurbita maxima] >XP_022988502.1 squamosa promoter-binding-like protein 13A [Cucurbita maxima]) HSP 1 Score: 188 bits (477), Expect = 7.98e-56 Identity = 91/96 (94.79%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of Csor.00g286380 vs. ExPASy TrEMBL
Match: A0A6J1E0F0 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111429705 PE=4 SV=1) HSP 1 Score: 196 bits (497), Expect = 3.85e-59 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Csor.00g286380 vs. ExPASy TrEMBL
Match: A0A6J1JD69 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111485724 PE=4 SV=1) HSP 1 Score: 188 bits (477), Expect = 3.86e-56 Identity = 91/96 (94.79%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of Csor.00g286380 vs. ExPASy TrEMBL
Match: A0A0A0LNV8 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001450 PE=4 SV=1) HSP 1 Score: 172 bits (435), Expect = 8.22e-50 Identity = 82/93 (88.17%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of Csor.00g286380 vs. ExPASy TrEMBL
Match: A0A1S3CLF0 (squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC103502309 PE=4 SV=1) HSP 1 Score: 169 bits (427), Expect = 1.29e-48 Identity = 84/117 (71.79%), Postives = 95/117 (81.20%), Query Frame = 0
BLAST of Csor.00g286380 vs. ExPASy TrEMBL
Match: A0A5A7UPH5 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00450 PE=4 SV=1) HSP 1 Score: 169 bits (427), Expect = 1.29e-48 Identity = 84/117 (71.79%), Postives = 95/117 (81.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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