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Csor.00g286300 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGTAACAACCAAGCCCAATCCTCCCCTTACCCTCCTCCTCAGGCCCCTGTTCCGGCCCCTCCCTTACACCACCTCCTTCAGCAGCAGCAACAGCAGCTTCAGATGTTCTGGTCCTTTCAGCGTCAAGAAATCGAACAGGTTAATGACTTTAAAAACCATCAGCTTCCTTTGGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTGCGTATGATATCCGCTGAGGCACCCATTTTGTTCGCCAAGGCGTGCGAGCTCTTCATTCTTGAACTCACGATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCAGCTGCCATCACGAGGACCGATATCTTTGATTTCTTGGTTGATATTGTGCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGTGGCATGGTTGGAGCCACTGCCAGTGGAGTGCCGTACTATTATCCGCCTATGGGCCAACCGGCAGGGCCCCCTGGGGGGATGATGATTGGGAGACCAGCAATGGATCCCACCGGAGTCTACGCTCAGCCGCCGTCGCAGGCGTGGCAATCGGTGTGGCAGCCGGCCGCAGAGGATGGTTCTTACGCGAGTGGGGGCAGCAGCGGGCAGGGCAATCTTGATGGTCAGAGGTAGGTGTTTATGGTTATTTGTGTCATTTGAATTAGTAATGCACAATTTAAGAATACGTCTTTAAGCGTCATCTTGTGTTCCATCCAGATTTGTGCCATGATCAAGCTGAATTGAATTCTTTCTTTTTCATGTTTTTACTGATTCCACATTTACATCTTCTTTATCGAGAGATTGCATGTTGGGATTGTTGCCTTTTTCCTCTTTCCTTACTGAGTAATCCCCCAACAAGAATGTGCATTGATTTGTTGAGTAATTTTCAGGATTTTGTAGGATTTTGTCTCTTTGGTGCTGTTTTCTCTCTTTTTCATGAATCTAATTAAATGTTTTAAAAGAAACCTTATCCTTTGGCCTTTGCTTGACAGGTTATCTTATTTTCCTCCCTCTCCCTCTCCCTCTCCCTCTCTTGTCTATATGAATAGCCCATCAAGTATCAATATCAGTAGCTTCCTTTTTATTAATGCCAATTGGAGGAATTCTTGTAACCCTCTTGACTTGGTTGATTTCTTATCACTCACCACTCGCCCTTCTTTTATATCTTCTTTTTTTCACGTAATGAAGATCTCTTTCTGTCTCTTAATGAAACAAAGGTTTCAAATCGACAGTGACAGCAATGGTTGAGGATGGTTGTGAAAGCCTTTGGATTCAATCAGTTGATTCTATAACAATAAAAAAAAACCCTTTTAAGCACATCTCATGGTTATTAATTCGTTCACCACTTATGACTATTCATACTTACTACCTCATAGAGAAAGTAAAAATGTCTTTCAACTTCCAAGTTATATCCATGTTTCCAAAAGGTATCAGTGCAATAAAAACAGTTGGAAGAGATAGTTTGAAAATGAACGTCCTTGCATAAGGATGGATGAGGGTGTTGGTATTAGTGTTATAGATACCATTCCTTAACGAAGAAATGCCCCTGCATGGGGTCAAAAGCTCGTGTTGGTCACTTTTTAGTAGATTGGTTAAAGAATTGTTCAATGATTTAGTGCTCCCTCCTACTAATCACAATTCTTCATAAAAATACATCCAATTAGGAATGAGGATGGCTGCTTGTGGATTGAGAAGGTGTTGAATAAAAGAGGACTATCACTAATTACAATACTATTCTAATCACTAATTGAGGTAATTGAAGACGTAAGAAGAAGAAAGAAGGGTTAGATGGTGAAATTACATCTTGACAAAGGTTGTTTTTTTTAAGAATATCACAGGTTAGTACAAGGATTGGTATTTTTTAGAATTGAATTTTCTTCTTAAAATCCTTCAGCTAGAAGATTTTGGTGCGAAATGGATGAGATAGATGCTCTTAGTAGGCTCCAAAACAGGAGTGGTAGCTAGCTTGCTTAAAGTATTAGAAATAGGCAAGGATGGTCCAACTTTTAGTTGCCCCCAATTCAATGGAAGATACTGTTCTTGTTTGATCATATGATGATGGAAACTTCAAAAGTTTGTTTATGATGCTGAATATATTGGAGAAGCACTCCGTGTTGAAAATAAATTTCAATACATCTTCCATCTTCCCTTGCTGAGATTAGTACAGACGTGGAAGGCATTTGTGACTAGAGGTGGTGTGACTTGTGAGATTTAATTATAAGGCCCAGAAGCTTCCTTTCTGCTACACTTATGTCCACTCGGTGATAGCCTCTTAAACACACACATATATCATCACATTAACTGTTCAGATACTGTTCTTGTTTGATCATATGATGATGGAAACTTCAAAAGTTTGTTTATGATGCTGAATATATTGGAGAAGCACTCCGTGTTGAAAATAAATTTCAGTACATCTTCCATCTTCCCTTGCTGAGATTAGTACAGACGTGGAAGGCATTTGTGACTAGAGGTGGTGTGACTTGTGAGATTTAATTATAAGGCCCAGAAGCTTCCTTTCTGCTACACTTATGTCCACTCGGTGATAGCCTCTTAAACACACACACATATGATCTGATCACATTTTCAACTGTTCAGACGTGGAAGGCATTTGTGACTAGAGGTGGTGTGACTTGTGAGATTTAATTATAAGGCCCAGAAGCTTCCTTTCTGCTACACTTATGTCCACTCGGTGATAGCCTCTTAAACACACACATATATCATCACATTAACTGTTCAGATACTGTTCTTGTTTGATCATATGATGATGGAAACTTCAAAAGTTTGTTTATGATGCTGAATATATTGGAGAAGCACTCCGTGTTGAAAATAAATTTCAATACATCTTCCATCTTCCCTTGCTGAGATTAGTACAGACTGGAAGGCATTTGTGACTAGGGTGGTGTGAAAGATTTAATTATAAGGCCCAGAAGCTTCCTTTCTGCTACACTTGTGTCCACTCATAGCCTCTTAAACACATTATCATCACATTAACTGGATACTGTTCTTGTTTGATCATATGATATGGAAACTTCAAAAGTTTGTTTATGATGCTGAATATATTGGAGAAGCACTCCCAACTAAATTTGTACATCTTCCATCTTCCCTTGCTGAGATTAGTACAGACGTGGAAGGCATTTGTGACTAGAGGTGGTGTGACTTGTGAGATTTAATTATAAGGCCCAGAAGCTTCCTTTCCCCTTATGTCAGGTTAGCCTCTTAAACACAATTCTTTAACTGTCATCAAAGATATTTGAAAATAAATTGGCGTGCACATCCAAATACTGAAGGAAAGGTGTCAAAAATTTGTATGGAAGTTGATATTCAAAATTATATCCCAACTTGTTTGTCATTCTTAGGGTTCTGATTCTGATTCTGATTCTGATGTTTGTTTCCCCTGCAGTTAA ATGGAGAGTAACAACCAAGCCCAATCCTCCCCTTACCCTCCTCCTCAGGCCCCTGTTCCGGCCCCTCCCTTACACCACCTCCTTCAGCAGCAGCAACAGCAGCTTCAGATGTTCTGGTCCTTTCAGCGTCAAGAAATCGAACAGGTTAATGACTTTAAAAACCATCAGCTTCCTTTGGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTGCGTATGATATCCGCTGAGGCACCCATTTTGTTCGCCAAGGCGTGCGAGCTCTTCATTCTTGAACTCACGATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCAGCTGCCATCACGAGGACCGATATCTTTGATTTCTTGGTTGATATTGTGCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGTGGCATGGTTGGAGCCACTGCCAGTGGAGTGCCGTACTATTATCCGCCTATGGGCCAACCGGCAGGGCCCCCTGGGGGGATGATGATTGGGAGACCAGCAATGGATCCCACCGGAGTCTACGCTCAGCCGCCGTCGCAGGCGTGGCAATCGGTGTGGCAGCCGGCCGCAGAGGATGGTTCTTACGCGAGTGGGGGCAGCAGCGGGCAGGGCAATCTTGATGGTCAGAGTTAA ATGGAGAGTAACAACCAAGCCCAATCCTCCCCTTACCCTCCTCCTCAGGCCCCTGTTCCGGCCCCTCCCTTACACCACCTCCTTCAGCAGCAGCAACAGCAGCTTCAGATGTTCTGGTCCTTTCAGCGTCAAGAAATCGAACAGGTTAATGACTTTAAAAACCATCAGCTTCCTTTGGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTGCGTATGATATCCGCTGAGGCACCCATTTTGTTCGCCAAGGCGTGCGAGCTCTTCATTCTTGAACTCACGATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCAGCTGCCATCACGAGGACCGATATCTTTGATTTCTTGGTTGATATTGTGCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGTGGCATGGTTGGAGCCACTGCCAGTGGAGTGCCGTACTATTATCCGCCTATGGGCCAACCGGCAGGGCCCCCTGGGGGGATGATGATTGGGAGACCAGCAATGGATCCCACCGGAGTCTACGCTCAGCCGCCGTCGCAGGCGTGGCAATCGGTGTGGCAGCCGGCCGCAGAGGATGGTTCTTACGCGAGTGGGGGCAGCAGCGGGCAGGGCAATCTTGATGGTCAGAGTTAA MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQS Homology
BLAST of Csor.00g286300 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 3.7e-93 Identity = 190/234 (81.20%), Postives = 199/234 (85.04%), Query Frame = 0
BLAST of Csor.00g286300 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 5.0e-90 Identity = 187/245 (76.33%), Postives = 196/245 (80.00%), Query Frame = 0
BLAST of Csor.00g286300 vs. ExPASy Swiss-Prot
Match: A6BLW4 (Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC2 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 7.8e-59 Identity = 136/221 (61.54%), Postives = 151/221 (68.33%), Query Frame = 0
BLAST of Csor.00g286300 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.9e-52 Identity = 119/186 (63.98%), Postives = 135/186 (72.58%), Query Frame = 0
BLAST of Csor.00g286300 vs. ExPASy Swiss-Prot
Match: Q8LCG7 (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NFYC2 PE=1 SV=2) HSP 1 Score: 206.5 bits (524), Expect = 3.2e-52 Identity = 103/137 (75.18%), Postives = 117/137 (85.40%), Query Frame = 0
BLAST of Csor.00g286300 vs. NCBI nr
Match: XP_022987443.1 (nuclear transcription factor Y subunit C-1 [Cucurbita maxima] >XP_023516854.1 nuclear transcription factor Y subunit C-1 [Cucurbita pepo subsp. pepo] >KAG6589382.1 Nuclear transcription factor Y subunit C-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 435 bits (1118), Expect = 1.13e-153 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Csor.00g286300 vs. NCBI nr
Match: XP_022921750.1 (nuclear transcription factor Y subunit C-1-like [Cucurbita moschata]) HSP 1 Score: 434 bits (1115), Expect = 3.25e-153 Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Csor.00g286300 vs. NCBI nr
Match: KAG7023061.1 (Nuclear transcription factor Y subunit C-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 434 bits (1115), Expect = 3.25e-153 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of Csor.00g286300 vs. NCBI nr
Match: XP_022134838.1 (nuclear transcription factor Y subunit C-1-like [Momordica charantia]) HSP 1 Score: 427 bits (1098), Expect = 1.27e-150 Identity = 217/220 (98.64%), Postives = 217/220 (98.64%), Query Frame = 0
BLAST of Csor.00g286300 vs. NCBI nr
Match: XP_038878995.1 (nuclear transcription factor Y subunit C-1 [Benincasa hispida]) HSP 1 Score: 423 bits (1088), Expect = 4.25e-149 Identity = 214/220 (97.27%), Postives = 216/220 (98.18%), Query Frame = 0
BLAST of Csor.00g286300 vs. ExPASy TrEMBL
Match: A0A6J1JJG4 (nuclear transcription factor Y subunit C-1 OS=Cucurbita maxima OX=3661 GN=LOC111484989 PE=4 SV=1) HSP 1 Score: 435 bits (1118), Expect = 5.49e-154 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Csor.00g286300 vs. ExPASy TrEMBL
Match: A0A6J1E6P4 (nuclear transcription factor Y subunit C-1-like OS=Cucurbita moschata OX=3662 GN=LOC111429907 PE=4 SV=1) HSP 1 Score: 434 bits (1115), Expect = 1.57e-153 Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Csor.00g286300 vs. ExPASy TrEMBL
Match: A0A6J1C352 (nuclear transcription factor Y subunit C-1-like OS=Momordica charantia OX=3673 GN=LOC111007012 PE=4 SV=1) HSP 1 Score: 427 bits (1098), Expect = 6.15e-151 Identity = 217/220 (98.64%), Postives = 217/220 (98.64%), Query Frame = 0
BLAST of Csor.00g286300 vs. ExPASy TrEMBL
Match: A0A0A0LNK7 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001515 PE=4 SV=1) HSP 1 Score: 422 bits (1086), Expect = 4.16e-149 Identity = 214/220 (97.27%), Postives = 216/220 (98.18%), Query Frame = 0
BLAST of Csor.00g286300 vs. ExPASy TrEMBL
Match: A0A1S3CLW7 (nuclear transcription factor Y subunit C-1 OS=Cucumis melo OX=3656 GN=LOC103502320 PE=4 SV=1) HSP 1 Score: 422 bits (1086), Expect = 4.16e-149 Identity = 214/220 (97.27%), Postives = 216/220 (98.18%), Query Frame = 0
BLAST of Csor.00g286300 vs. TAIR 10
Match: AT3G48590.1 (nuclear factor Y, subunit C1 ) HSP 1 Score: 342.4 bits (877), Expect = 2.6e-94 Identity = 190/234 (81.20%), Postives = 199/234 (85.04%), Query Frame = 0
BLAST of Csor.00g286300 vs. TAIR 10
Match: AT5G63470.1 (nuclear factor Y, subunit C4 ) HSP 1 Score: 332.0 bits (850), Expect = 3.6e-91 Identity = 187/245 (76.33%), Postives = 196/245 (80.00%), Query Frame = 0
BLAST of Csor.00g286300 vs. TAIR 10
Match: AT5G63470.2 (nuclear factor Y, subunit C4 ) HSP 1 Score: 332.0 bits (850), Expect = 3.6e-91 Identity = 187/245 (76.33%), Postives = 196/245 (80.00%), Query Frame = 0
BLAST of Csor.00g286300 vs. TAIR 10
Match: AT1G54830.2 (nuclear factor Y, subunit C3 ) HSP 1 Score: 207.2 bits (526), Expect = 1.3e-53 Identity = 119/186 (63.98%), Postives = 135/186 (72.58%), Query Frame = 0
BLAST of Csor.00g286300 vs. TAIR 10
Match: AT1G54830.1 (nuclear factor Y, subunit C3 ) HSP 1 Score: 207.2 bits (526), Expect = 1.3e-53 Identity = 119/186 (63.98%), Postives = 135/186 (72.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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