Homology
BLAST of Csor.00g286020 vs. ExPASy Swiss-Prot
Match:
Q04836 (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 1.6e-79
Identity = 185/339 (54.57%), Postives = 231/339 (68.14%), Query Frame = 0
Query: 1 MASSSATSILKPLSKAD---SCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSL 60
MASS TS LKPL+ AD S + S PS+ S T +L S S +
Sbjct: 1 MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSF-SRV 60
Query: 61 FSSSKKKPHL--SSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENES 120
S K K HL S V++VAQ+S+W +E G E EN S++ S
Sbjct: 61 SLSLKTKTHLKKSPFVSFVAQTSDWAEE-----------GGEGSVAVEETENSLESQDVS 120
Query: 121 RISDWEGE-GEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLA 180
+ EG+ EG+ G E E G V E E EP+E+AKL+VGNL+YD +SQ LA
Sbjct: 121 EGDESEGDASEGDVSEGDESE-GDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALA 180
Query: 181 MLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAA 240
MLFE+AGTVEIAEVIY+R++D+SRGFGFVTMSSV+EAE AV+ FNRY+ GR L VNKAA
Sbjct: 181 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAA 240
Query: 241 ARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGF 300
RGSRPER PR ++PAFR+YVGNL W+VD+ RLEQ+FSEHGKVV+ARV+YDR++GRSRGF
Sbjct: 241 PRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGF 300
Query: 301 GFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRR 334
GFVTM+D +N+AI+ALDGQ+++GRAIRVNVAEE+P R
Sbjct: 301 GFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326
BLAST of Csor.00g286020 vs. ExPASy Swiss-Prot
Match:
P19683 (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 284.3 bits (726), Expect = 1.8e-75
Identity = 179/337 (53.12%), Postives = 222/337 (65.88%), Query Frame = 0
Query: 3 SSSATSILKPLSKA-DSCLLSLPSLFPCRPPHSFLSFPSKFTTAP----FHLSSSHCSSL 62
S + I+KP S A +SCL+SLP LF ++P T HLS ++ S
Sbjct: 2 SCATKPIIKPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKLLHLSCTY-SPC 61
Query: 63 FSSSKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRI 122
S KKK +S+L +E++T+ +D + G+E N E S E
Sbjct: 62 ILSPKKKTSVSAL----------QEEENTLILDGQ------GQESGDLFNFEPSGEE--- 121
Query: 123 SDWEGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLF 182
++ EG E D G E DEEE +EP EDAKL+VGNL YD DS+ LA LF
Sbjct: 122 TEEEGFVEAVGDAGESDE-----VEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLF 181
Query: 183 EKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARG 242
E+AG VEIAEVIY+R +D+SRGFGFVTMS+VEEAEKAV+ +NRY+ GR L VNKAA RG
Sbjct: 182 EQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRG 241
Query: 243 SRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 302
RPER PRTF+ ++RIYVGN+ W +D ARLEQ+FSEHGKVV ARV+YDR++GRSRGFGFV
Sbjct: 242 ERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFV 301
Query: 303 TMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRN 335
TMA E M+DAIA LDGQS+DGR IRVNVAE++ RRN
Sbjct: 302 TMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRRN 313
BLAST of Csor.00g286020 vs. ExPASy Swiss-Prot
Match:
P19682 (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 279.3 bits (713), Expect = 5.9e-74
Identity = 163/319 (51.10%), Postives = 211/319 (66.14%), Query Frame = 0
Query: 17 DSCLLSLPSLFPCRPPHSFLSFPSKFT-TAPFHLSSSHCSSLFSSSKKKPHLSSLVAYVA 76
+ CL+SLP F S S+P T P LSSS +L S +K+ + V+ ++
Sbjct: 4 NGCLISLPPFF--TTTKSISSYPFLSTQLKPISLSSS-LPTLLSLNKRTTQFPTFVSVLS 63
Query: 77 QSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDWEGEGEGEDDGGSEGE 136
++D+T+ +D + E G + P +
Sbjct: 64 ------EDDNTLVLDDQ----EQGGDFPSF------------------------------ 123
Query: 137 GGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKAGTVEIAEVIYDRQSD 196
V E G+ EE +EP+EDAKL+VGNL YD DS+ LA LF++AG VEIAEVIY+R++D
Sbjct: 124 ---VGEAGETEE--YQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETD 183
Query: 197 RSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRPERQPRTFQPAFRIYV 256
RSRGFGFVTMS+VEEA+KAV+ +++Y+ GR L VNKAA RGSRPER PRTFQP +RIYV
Sbjct: 184 RSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYV 243
Query: 257 GNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQ 316
GN+ W++D ARLEQVFSEHGKVV ARV++DR+SGRSRGFGFVTM+ E M++AIA LDGQ
Sbjct: 244 GNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQ 274
Query: 317 SVDGRAIRVNVAEEKPRRN 335
++DGR IRVN AEE+PRRN
Sbjct: 304 TLDGRTIRVNAAEERPRRN 274
BLAST of Csor.00g286020 vs. ExPASy Swiss-Prot
Match:
Q9FGS0 (RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31B PE=1 SV=1)
HSP 1 Score: 273.5 bits (698), Expect = 3.2e-72
Identity = 147/220 (66.82%), Postives = 177/220 (80.45%), Query Frame = 0
Query: 115 SRISDWEGEGEGEDDGGSEGEGGGVLELGDEEEG-PLEEPNEDAKLYVGNLSYDADSQKL 174
S+ S+W E EGE DG G V E + E+G EP E+AKL+VGNL YD DSQ L
Sbjct: 71 SQTSNWAEEEEGE-DGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQAL 130
Query: 175 AMLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKA 234
AMLFE+AGTVEI+EVIY+R +D+SRGFGFVTMS+VEEAEKAV+ FN +E GR L VN+A
Sbjct: 131 AMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRA 190
Query: 235 AARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRG 294
A RGSRPERQPR + AFRIYVGNL W+VDS RLE++FSEHGKVVDARV+ DR++GRSRG
Sbjct: 191 APRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRG 250
Query: 295 FGFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRR 334
FGFV M++E +N AIAALDGQ+++GRAI+VNVAEE+ RR
Sbjct: 251 FGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
BLAST of Csor.00g286020 vs. ExPASy Swiss-Prot
Match:
P28644 (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)
HSP 1 Score: 273.1 bits (697), Expect = 4.2e-72
Identity = 154/263 (58.56%), Postives = 190/263 (72.24%), Query Frame = 0
Query: 74 VAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDWEGEGEGEDDGGSE 133
VAQ+SEW QE T + L G+ D E W +E+++S D+GG E
Sbjct: 2 VAQTSEWEQEGSTNAV---LEGESDPEGAVSW------GSETQVS---------DEGGVE 61
Query: 134 GEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKAGTVEIAEVIYDRQ 193
G G EP E+AKL+VGNL YD DS+KLA +F+ AG VEIAEVIY+R+
Sbjct: 62 GGQG------------FSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRE 121
Query: 194 SDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRPERQPR-TFQPAFR 253
+DRSRGFGFVTMS+VEEAEKAV+ N Y+ GR L VNKAA RGS PER PR F+P+ R
Sbjct: 122 TDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGS-PERAPRGDFEPSCR 181
Query: 254 IYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAAL 313
+YVGNL W+VD++RLEQ+FSEHGKVV ARV+ DR++GRSRGFGFVTM+ E+ +NDAIAAL
Sbjct: 182 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 233
Query: 314 DGQSVDGRAIRVNVAEEKPRRNF 336
DGQ++DGRA+RVNVAEE+PRR F
Sbjct: 242 DGQTLDGRAVRVNVAEERPRRAF 233
BLAST of Csor.00g286020 vs. NCBI nr
Match:
KAG6589409.1 (31 kDa ribonucleoprotein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 647 bits (1668), Expect = 1.18e-233
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
Query: 61 SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61 SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKA 180
EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKA 180
Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
BLAST of Csor.00g286020 vs. NCBI nr
Match:
KAG7023089.1 (31 kDa ribonucleoprotein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 642 bits (1656), Expect = 7.97e-232
Identity = 333/335 (99.40%), Postives = 333/335 (99.40%), Query Frame = 0
Query: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
Query: 61 SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
SKKK HLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61 SKKKTHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKA 180
EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYD DSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
BLAST of Csor.00g286020 vs. NCBI nr
Match:
XP_023515898.1 (28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 634 bits (1635), Expect = 1.27e-228
Identity = 330/335 (98.51%), Postives = 330/335 (98.51%), Query Frame = 0
Query: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
MASSSATSILKPLSKADSCLLSLPSLF CRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1 MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
Query: 61 SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
SKKK HLSSLVA VAQSSEWGQEDDTITIDPKL GDEDGEEGPHWENQELSENESRISDW
Sbjct: 61 SKKKTHLSSLVASVAQSSEWGQEDDTITIDPKLGGDEDGEEGPHWENQELSENESRISDW 120
Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKA 180
EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYD DSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
BLAST of Csor.00g286020 vs. NCBI nr
Match:
XP_022921514.1 (28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 633 bits (1633), Expect = 2.55e-228
Identity = 330/335 (98.51%), Postives = 330/335 (98.51%), Query Frame = 0
Query: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
MASSSATSILKPLSKADSCLLSLPSLF CRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1 MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
Query: 61 SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
SKKK HLSSLVA VAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61 SKKKTHLSSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKA 180
EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYD DSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGR LVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRPLVVNKAAARGSRP 240
Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
BLAST of Csor.00g286020 vs. NCBI nr
Match:
XP_022987125.1 (28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 633 bits (1633), Expect = 2.55e-228
Identity = 330/335 (98.51%), Postives = 330/335 (98.51%), Query Frame = 0
Query: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
MASSSATSILKPLSKADSCLLSLPSLF CRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1 MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
Query: 61 SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
SKKK HL SLVA VAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61 SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKA 180
EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYD DSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
BLAST of Csor.00g286020 vs. ExPASy TrEMBL
Match:
A0A6J1JFY1 (28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484771 PE=4 SV=1)
HSP 1 Score: 633 bits (1633), Expect = 1.24e-228
Identity = 330/335 (98.51%), Postives = 330/335 (98.51%), Query Frame = 0
Query: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
MASSSATSILKPLSKADSCLLSLPSLF CRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1 MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
Query: 61 SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
SKKK HL SLVA VAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61 SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKA 180
EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYD DSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
BLAST of Csor.00g286020 vs. ExPASy TrEMBL
Match:
A0A6J1E0P7 (28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111429756 PE=4 SV=1)
HSP 1 Score: 633 bits (1633), Expect = 1.24e-228
Identity = 330/335 (98.51%), Postives = 330/335 (98.51%), Query Frame = 0
Query: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
MASSSATSILKPLSKADSCLLSLPSLF CRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1 MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
Query: 61 SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
SKKK HLSSLVA VAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61 SKKKTHLSSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKA 180
EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYD DSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGR LVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRPLVVNKAAARGSRP 240
Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
BLAST of Csor.00g286020 vs. ExPASy TrEMBL
Match:
A0A6J1C316 (28 kDa ribonucleoprotein, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111006981 PE=4 SV=1)
HSP 1 Score: 510 bits (1314), Expect = 5.02e-180
Identity = 275/341 (80.65%), Postives = 300/341 (87.98%), Query Frame = 0
Query: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
MAS+SATSILKPLSKADSCLLSLPS+F CRPPHSFLSFPSK FHLSSS SS FS
Sbjct: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIR--FHLSSSSHSSPFSL 60
Query: 61 SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDED--GEEGPHWENQELSENESRIS 120
SKKKPH SSLV++VAQ+S+W QEDDTITIDPKL GDE+ E+GPHWENQELSE ESRIS
Sbjct: 61 SKKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRIS 120
Query: 121 DWEGEGEGEDDGGSEGEG----GGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLA 180
DWEGE E DGGSE EG GG+LE +EEEG EEPNEDAKL+VGNL YD DSQKLA
Sbjct: 121 DWEGEAE---DGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLA 180
Query: 181 MLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAA 240
M+F KAGTVEIAEVIY+R++D+SRGFGFVTMS+VEEAEKAVDTFNRYE GR L VNKAA
Sbjct: 181 MIFGKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAA 240
Query: 241 ARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGF 300
RG+RPER PRTFQ +FRIYVGNL W+VD+ARLEQVFSEHGKVV+ARVLYDRD+GRSRGF
Sbjct: 241 PRGARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGF 300
Query: 301 GFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
GFVTMADETGMNDAIAALDGQS+DGRAIRVNVAEE+PRRNF
Sbjct: 301 GFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 336
BLAST of Csor.00g286020 vs. ExPASy TrEMBL
Match:
A0A5A7USX4 (Ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00900 PE=4 SV=1)
HSP 1 Score: 496 bits (1276), Expect = 2.55e-174
Identity = 271/338 (80.18%), Postives = 292/338 (86.39%), Query Frame = 0
Query: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHC-SSLFS 60
MAS+SATS+ K LSK DSC LSLPSLF RPPH+FLSFPSKF PFHLSSS SS F
Sbjct: 1 MASTSATSLFKTLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFI--PFHLSSSSSHSSCFY 60
Query: 61 SSKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEE--GPHWENQELSENESRI 120
SKKKPHL S VAQ+S+W QEDDT+TIDPKL DED EE GPHWEN+ELSE ESRI
Sbjct: 61 PSKKKPHLPS----VAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRI 120
Query: 121 SDWEGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLF 180
SDWEGEGEGED GGSE E GG E + E+GP EEPNEDAKL+VGNL YD DS+KLAMLF
Sbjct: 121 SDWEGEGEGED-GGSEAEVGGDEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLF 180
Query: 181 EKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARG 240
EKAGTVEIAEVIY+R++DRSRGFGFVTMS+VEEAEKAVDTFNRYE GR L VNKAA RG
Sbjct: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG 240
Query: 241 SRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 300
+R ERQPR FQPAFRIYVGNL W+VD+ARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV
Sbjct: 241 TRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 300
Query: 301 TMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
TMADETGMNDAIAALDGQS++GRAIRVNVAEE+PRRNF
Sbjct: 301 TMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
BLAST of Csor.00g286020 vs. ExPASy TrEMBL
Match:
A0A5D3BIH5 (28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00930 PE=4 SV=1)
HSP 1 Score: 493 bits (1268), Expect = 4.05e-173
Identity = 271/339 (79.94%), Postives = 292/339 (86.14%), Query Frame = 0
Query: 1 MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHC-SSLFS 60
MAS+SATS+ KPLSK DSC LSLPSLF RPPH+FLSFPSKF PFHLSSS SS F
Sbjct: 1 MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFI--PFHLSSSSSHSSCFY 60
Query: 61 SSKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEE--GPHWENQELSENESRI 120
SKKKPHL S VAQ+S+W QEDDT+TIDPKL DED EE GPHWEN+ELSE ESRI
Sbjct: 61 PSKKKPHLPS----VAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRI 120
Query: 121 SDWEGEGEGEDDGGSEGEGGGVLELGDE-EEGPLEEPNEDAKLYVGNLSYDADSQKLAML 180
SDWEGEGE DGGSE E GG E +E E+GP EEPNEDAKL+VGNL YD DS+KLAML
Sbjct: 121 SDWEGEGE---DGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAML 180
Query: 181 FEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAAR 240
FEKAGTVEIAEVIY+R++DRSRGFGFVTMS+VEEAEKAVDTFNRYE GR L VNKAA R
Sbjct: 181 FEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPR 240
Query: 241 GSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF 300
G+R ERQPR FQPAFRIYVGNL W+VD+ARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF
Sbjct: 241 GTRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF 300
Query: 301 VTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
VTMADETGMNDAIAALDGQS++GRAIRVNVAEE+PRRNF
Sbjct: 301 VTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 330
BLAST of Csor.00g286020 vs. TAIR 10
Match:
AT4G24770.1 (31-kDa RNA binding protein )
HSP 1 Score: 297.7 bits (761), Expect = 1.1e-80
Identity = 185/339 (54.57%), Postives = 231/339 (68.14%), Query Frame = 0
Query: 1 MASSSATSILKPLSKAD---SCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSL 60
MASS TS LKPL+ AD S + S PS+ S T +L S S +
Sbjct: 1 MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSF-SRV 60
Query: 61 FSSSKKKPHL--SSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENES 120
S K K HL S V++VAQ+S+W +E G E EN S++ S
Sbjct: 61 SLSLKTKTHLKKSPFVSFVAQTSDWAEE-----------GGEGSVAVEETENSLESQDVS 120
Query: 121 RISDWEGE-GEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLA 180
+ EG+ EG+ G E E G V E E EP+E+AKL+VGNL+YD +SQ LA
Sbjct: 121 EGDESEGDASEGDVSEGDESE-GDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALA 180
Query: 181 MLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAA 240
MLFE+AGTVEIAEVIY+R++D+SRGFGFVTMSSV+EAE AV+ FNRY+ GR L VNKAA
Sbjct: 181 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAA 240
Query: 241 ARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGF 300
RGSRPER PR ++PAFR+YVGNL W+VD+ RLEQ+FSEHGKVV+ARV+YDR++GRSRGF
Sbjct: 241 PRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGF 300
Query: 301 GFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRR 334
GFVTM+D +N+AI+ALDGQ+++GRAIRVNVAEE+P R
Sbjct: 301 GFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326
BLAST of Csor.00g286020 vs. TAIR 10
Match:
AT5G50250.1 (chloroplast RNA-binding protein 31B )
HSP 1 Score: 273.5 bits (698), Expect = 2.3e-73
Identity = 147/220 (66.82%), Postives = 177/220 (80.45%), Query Frame = 0
Query: 115 SRISDWEGEGEGEDDGGSEGEGGGVLELGDEEEG-PLEEPNEDAKLYVGNLSYDADSQKL 174
S+ S+W E EGE DG G V E + E+G EP E+AKL+VGNL YD DSQ L
Sbjct: 71 SQTSNWAEEEEGE-DGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQAL 130
Query: 175 AMLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKA 234
AMLFE+AGTVEI+EVIY+R +D+SRGFGFVTMS+VEEAEKAV+ FN +E GR L VN+A
Sbjct: 131 AMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRA 190
Query: 235 AARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRG 294
A RGSRPERQPR + AFRIYVGNL W+VDS RLE++FSEHGKVVDARV+ DR++GRSRG
Sbjct: 191 APRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRG 250
Query: 295 FGFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRR 334
FGFV M++E +N AIAALDGQ+++GRAI+VNVAEE+ RR
Sbjct: 251 FGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
BLAST of Csor.00g286020 vs. TAIR 10
Match:
AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 184.5 bits (467), Expect = 1.4e-46
Identity = 101/197 (51.27%), Postives = 123/197 (62.44%), Query Frame = 0
Query: 156 DAKLYVGNLSYDADSQKLAMLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAV 215
D KL+VGNL ++ DS +LA LFE AG VE+ EVIYD+ + RSRGFGFVTMSSV E E A
Sbjct: 90 DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAA 149
Query: 216 DTFNRYEFLGRTLVVNKAAARGSRPERQPRTFQPAF-------------------RIYVG 275
FN YE GR L VN R + R + +F R+YVG
Sbjct: 150 QQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVG 209
Query: 276 NLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQS 334
NL+W VD LE +FSE GKVV+ARV+YDRDSGRS+GFGFVT + +AI +LDG
Sbjct: 210 NLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGAD 269
BLAST of Csor.00g286020 vs. TAIR 10
Match:
AT3G53460.1 (chloroplast RNA-binding protein 29 )
HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39
Identity = 111/282 (39.36%), Postives = 142/282 (50.35%), Query Frame = 0
Query: 118 SDWEGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEP--NEDAKLYVGNLSYDADSQKLAM 177
SD+E E EDD ++G ++ P+E + D KL+VGNLS++ DS +LA
Sbjct: 71 SDFEVE---EDDMFADG----------DDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQ 130
Query: 178 LFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAA 237
LFE AG VE+ EVIYD+ + RSRGFGFVTMS+ E E A FN YEF GR L VN
Sbjct: 131 LFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPP 190
Query: 238 RGSRPE---RQPRT---------------------------------------------- 297
R E R PR+
Sbjct: 191 PPKREESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGG 250
Query: 298 ---------------FQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRS 334
R+YVGNL+W VD LE +F+E GKVV+ARV+YDRDSGRS
Sbjct: 251 SQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRS 310
BLAST of Csor.00g286020 vs. TAIR 10
Match:
AT3G53460.2 (chloroplast RNA-binding protein 29 )
HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39
Identity = 111/282 (39.36%), Postives = 142/282 (50.35%), Query Frame = 0
Query: 118 SDWEGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEP--NEDAKLYVGNLSYDADSQKLAM 177
SD+E E EDD ++G ++ P+E + D KL+VGNLS++ DS +LA
Sbjct: 71 SDFEVE---EDDMFADG----------DDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQ 130
Query: 178 LFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAA 237
LFE AG VE+ EVIYD+ + RSRGFGFVTMS+ E E A FN YEF GR L VN
Sbjct: 131 LFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPP 190
Query: 238 RGSRPE---RQPRT---------------------------------------------- 297
R E R PR+
Sbjct: 191 PPKREESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGG 250
Query: 298 ---------------FQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRS 334
R+YVGNL+W VD LE +F+E GKVV+ARV+YDRDSGRS
Sbjct: 251 SQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRS 310
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q04836 | 1.6e-79 | 54.57 | 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A... | [more] |
P19683 | 1.8e-75 | 53.12 | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=... | [more] |
P19682 | 5.9e-74 | 51.10 | 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=... | [more] |
Q9FGS0 | 3.2e-72 | 66.82 | RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31... | [more] |
P28644 | 4.2e-72 | 58.56 | 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG6589409.1 | 1.18e-233 | 100.00 | 31 kDa ribonucleoprotein, chloroplastic, partial [Cucurbita argyrosperma subsp. ... | [more] |
KAG7023089.1 | 7.97e-232 | 99.40 | 31 kDa ribonucleoprotein, chloroplastic, partial [Cucurbita argyrosperma subsp. ... | [more] |
XP_023515898.1 | 1.27e-228 | 98.51 | 28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022921514.1 | 2.55e-228 | 98.51 | 28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata] | [more] |
XP_022987125.1 | 2.55e-228 | 98.51 | 28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JFY1 | 1.24e-228 | 98.51 | 28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1... | [more] |
A0A6J1E0P7 | 1.24e-228 | 98.51 | 28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO... | [more] |
A0A6J1C316 | 5.02e-180 | 80.65 | 28 kDa ribonucleoprotein, chloroplastic-like OS=Momordica charantia OX=3673 GN=L... | [more] |
A0A5A7USX4 | 2.55e-174 | 80.18 | Ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00... | [more] |
A0A5D3BIH5 | 4.05e-173 | 79.94 | 28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |