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Csor.00g284820 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCGTGGCCACAGAAGTGTGTGTTCCCTGTGACGAATGTTTCTCTGTCTCCATCGCAATCCTGCAATCGGTTGAGTATCAATTTGTCGGCAGAAGAAAATGGAAGAGGCCCAACATCATTCTTTCACAACAGCTTGCATTTGGTTTGCTCAATTTCCACTCTCATCAACCAAACATTTATTGCCAGTTCTGCACCAACGTGCAGTTCTGATGGGGCTCCATGGTTAGTGTCTATCCACCAGTCATTCAAAAACGACCCTTGATGACAATGGATAAGTGCTTACAAACGAAGCATTTCACTTCAAAATACTTTTTTCTTACAAAGACATCCGAACTAGCCGCTCGATTAGAGAGGGGAACGAAACATTCTTTACAAGAGTACAGAACATTTTTCTAGCAGACACGTCAGCTTAGAAGGAAAAGTCCAAAAAGAACAATATTTGTTAGTGATAGGCTTAGGCTGTTTAGAAGAGTATAGAACATTTTTCTAGCAGACACGTCAGCTTAGAAGGAAAAGTCCAAAGAGAACAATATTTGTTAGTGATAGGCTTAGGCTGTTTACAAGAGTACAGAACATTTTTCTAGCAGACACGTCAGCTTAGAAGGAAAAGTCCAAAGAGAACAATATTTGTTAGTAATGGGCTTAGGCTGTTTACAAGAGTACAGAACATTTTTCTAGCAGACACGTCAGCTTAAAAGAAAACGTCCAAAGAGAACAATATTTGTTAGTGATGGGCTTAGGCTGTTACTAATTGTATAAGAGCTAGGCACCAAACGGTGTGCCAGCGAGGAGGCTTGAAGGGGGTGGACACCAGGCGGTGTACCAACGAGGATGTTGGGTCCCAATGAGAGGTGGATTTGGGGGCTTTACATCGATTGAAGAGGGAAATGAGTATCAGCGAGGACGCTGGGCCTCAGAGGATAAAGACGTGGAAACCTCTCCATTGAGACGCGTTTTAGAACTTTGAGGGGAAGCCCAAAAAGAAAAATCCAAAGAGAACAAGAGAAGTGTCGAGGACAATATCGATTAGCACGTGCTGGCACCCACCTGTTACATATTTTTCCTTGCATAAACACCCCCTCGTGGGAAAGAAGGGTTGAGAAGAAGTTGAGAGTGGTCCATTGATTGGAACCCAAAGCTGAGAGAGACTTAAATTCCCTTACAACATTCTTTCTGCTATCTTGGTTTCATACTGTGACATCTCTCTATCATGTAACCATTATAAACATAGCTCACGACACACAGAACAGCAAGAGAAAGAGAAGAGAGCCTCAGAGTGGCTTCACCCTCAACCTCCTGATAGCCTAGCTTCTTCTGTCAATAGCAAAACAGTACATATTATTTAGCATGAACCAGTGGATAGTCCCAAAATGGAACCAATCACAACAACATGAAGATGCTAGCAGATCTTCCCATGTCCATTTCCCCCACAAAAACACTACTTTCAGCCACAATCTTGTCCCCATGTAAGCACTAATTGAATTAGCCAAGCTCATTTATCTCTTTGTTTTTGTGTGTTTTAGGTCGTCATTTGCGAGAAACAAACTCATTTCTTGAGTTCTAGTACTTATGCTAAAACTACTCATTTAAAAAGTGCTTTCATACCCTCCATTGATGTCTTTTTGGGGGTGAATTGGTGCAATATTTCAGGGCAAAGTATGAAGCAGTGGAGAGGACATGGGAGAGTGGAGATCAAGAAGCAGCAGTGGACGGCCATGGGGAGGTGGTTCTTCAAATGGCTTCAACAAAGCACTCATGGGGCCAATCCGAAGACACCCTCGAGTCCATAGTCCATAGTTCACTGTTGAGGAAACGGACACGATCCAACCCAGAAGGCAAAGATGAAACTTTTACGAGTGGGGCTTTTTCAGAATCTCATAGGAGCTTCAAAGCCAAAAATTCCATTGAAGACTTAGCTCCAGATGATGGCTCGGTGATTCACAAGCTCCTTTGTTTAATAAACTTGTTTTGTTGTGCTTTTTTGGTGCACTTTTAGTGGACATCACTGGCAGTTTATTTAGTTGTTTGTAGCGTTGAAATCAGGAGGACGAACATAACACGAAGAGGAAAACAAGTGGGAGCTGTTCAATTAGACGAACTCAGTCTGAGAGAGTAAATGACTATGAAATGACTTTTTACTTCTGTAAATACTTAAAAAATTAACATAACAAGAAGATTTTAATCAATTTGAATACTCGGGAGTTGAAATCTCTTTTTACCTTTTTTGTAGAGACGAAGAGATCGGATAAACCAGAAGTTAAAAGATCTTCAAAAGTTGGTGCCAAATAGGAGTAAGGTACGAAAATTCATATATTTGAAAAACTCGTATATAACTATGACCTAAACTCAAATTCAATCGGTTGGGGAGGAGAACAAAATACCTTTTATAAAGGTGTGGAAACCTTTCCCTAGCAGACGCGTTTTAAAGCCTTGAAGGGAAGCTCGAAAGAGAGTCCGAAAAGGACAATATCTGCTAGCGGTGGATATAGGCTGTTACAGCCTCAGAGACTATAAAACATGTATTCCGTGATTGACGATAAACTTATCATATTAGCATATCCTATACTCCAAGAACTTCACTTGTACAGACTGATAAAAAGGGCTAAAAACTCTCCTTTTACAGACTGATAGAGCTTCACTTTTGGACGACACGATTCAATATTTGAAGCAACTTAAAGCACAAGTTCAGTTCATGTGCAGCATTAGATCAGATGTGCCACAGATGATCGTACCTCTAGGAATGCAGCAGCAGCAGCAGCAGCTTCAAGTGTCGCTGCTCGCAGCTCGTATGGGACTGCTTGACACTGCTTCAATGGCTTCCAGTTCCAGTTCCTTCCCTTGTGCTGCTGCATGTTCTCCGACTCTACTGCCTTCCATCATCTCATCAACAAAGCCAAAATCTAAACTTTCCACCTCTGCTTTCGTCCCTCCAACCGATCCTTTCTGCACTTTTCTGGCACAAGTAAGTCCAACACAAACTATATGTACATCTGCAACAAAATCCTAAAAAAGCAACCAAACGGATCAAACTACCAGTTTAGTTGGTTTCAGTAACACATTGATCAGAGTTCAAATTGTTGGGATAGTTGGTTTGGTGTAATGGCTTAAGCCCACCGCTCGCAGACATTGTCCTATTTGTGCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACACGTATGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATTACTTAGTTCTCCTCTCCAACCGATGTGGGATCTCACAATCCACCACCTTGTTTGAGCCTCAGCGACCTCGATGACACAAAGCCCGGTGACTGGCTTTGATACCATTTGTAATGGTCTAAGCCCAACGCTAGAAGATATTGTCTTGTTTGGGTTTTTCTTTTCGAACTTTCCCTCAAAATTTTTAAAACATGTCGACAAGAGAGAGGTATCAACACCCTGATAAAGAATGCTTAGTTCCAATCGACGTGGGATCTCACAGTTATAGGCACCGGTCGGGGCCTGATTCAATTTTCAACTTTAAGAGTCAAGAGGGTTAAGAGTAAAATTGGATGTTGAGCATCCTACATAAACTCCTAACATGAAAAGAGTGAATGTGCAGCCAACTATACCAGTTTAGTTTAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATCGAAATGCTGATTTTTTGTTGCTGCAGTCAATGGATATGGATCTGTACAGTAAAATGGTGACACTATATTGCCAAGAAGTGAACAGGACACCTCGGCAGACAAGCAAATTAATGGAATCACAATGTGTAGAAGGGATCGAGGAGGATATGCATCAGAGCTAG ATGGATTCGTGGCCACAGAAGTGTGTGTTCCCTGTGACGAATGTTTCTCTGTCTCCATCGCAATCCTGCAATCGGTTGAGTATCAATTTGTCGGCAGAAGAAAATGGAAGAGGCCCAACATCATTCTTTCACAACAGCTTGCATTTGGTTTGCTCAATTTCCACTCTCATCAACCAAACATTTATTGCCAGTTCTGCACCAACGTGCAGTTCTGATGGGGCTCCATGGGCAAAGTATGAAGCAGTGGAGAGGACATGGGAGAGTGGAGATCAAGAAGCAGCAGTGGACGGCCATGGGGAGGTGGTTCTTCAAATGGCTTCAACAAAGCACTCATGGGGCCAATCCGAAGACACCCTCGAGTCCATAGTCCATAGTTCACTGTTGAGGAAACGGACACGATCCAACCCAGAAGGCAAAGATGAAACTTTTACGAGTGGGGCTTTTTCAGAATCTCATAGGAGCTTCAAAGCCAAAAATTCCATTGAAGACTTAGCTCCAGATGATGGCTCGGAGGACGAACATAACACGAAGAGGAAAACAAGTGGGAGCTGTTCAATTAGACGAACTCAGTCTGAGAGAAGACGAAGAGATCGGATAAACCAGAAGTTAAAAGATCTTCAAAAGTTGGTGCCAAATAGGAGTAAGACTGATAGAGCTTCACTTTTGGACGACACGATTCAATATTTGAAGCAACTTAAAGCACAAGTTCAGTTCATGTGCAGCATTAGATCAGATGTGCCACAGATGATCGTACCTCTAGGAATGCAGCAGCAGCAGCAGCAGCTTCAAGTGTCGCTGCTCGCAGCTCGTATGGGACTGCTTGACACTGCTTCAATGGCTTCCAGTTCCAGTTCCTTCCCTTGTGCTGCTGCATGTTCTCCGACTCTACTGCCTTCCATCATCTCATCAACAAAGCCAAAATCTAAACTTTCCACCTCTGCTTTCGTCCCTCCAACCGATCCTTTCTGCACTTTTCTGGCACAATCAATGGATATGGATCTGTACAGTAAAATGGTGACACTATATTGCCAAGAAGTGAACAGGACACCTCGGCAGACAAGCAAATTAATGGAATCACAATGTGTAGAAGGGATCGAGGAGGATATGCATCAGAGCTAG ATGGATTCGTGGCCACAGAAGTGTGTGTTCCCTGTGACGAATGTTTCTCTGTCTCCATCGCAATCCTGCAATCGGTTGAGTATCAATTTGTCGGCAGAAGAAAATGGAAGAGGCCCAACATCATTCTTTCACAACAGCTTGCATTTGGTTTGCTCAATTTCCACTCTCATCAACCAAACATTTATTGCCAGTTCTGCACCAACGTGCAGTTCTGATGGGGCTCCATGGGCAAAGTATGAAGCAGTGGAGAGGACATGGGAGAGTGGAGATCAAGAAGCAGCAGTGGACGGCCATGGGGAGGTGGTTCTTCAAATGGCTTCAACAAAGCACTCATGGGGCCAATCCGAAGACACCCTCGAGTCCATAGTCCATAGTTCACTGTTGAGGAAACGGACACGATCCAACCCAGAAGGCAAAGATGAAACTTTTACGAGTGGGGCTTTTTCAGAATCTCATAGGAGCTTCAAAGCCAAAAATTCCATTGAAGACTTAGCTCCAGATGATGGCTCGGAGGACGAACATAACACGAAGAGGAAAACAAGTGGGAGCTGTTCAATTAGACGAACTCAGTCTGAGAGAAGACGAAGAGATCGGATAAACCAGAAGTTAAAAGATCTTCAAAAGTTGGTGCCAAATAGGAGTAAGACTGATAGAGCTTCACTTTTGGACGACACGATTCAATATTTGAAGCAACTTAAAGCACAAGTTCAGTTCATGTGCAGCATTAGATCAGATGTGCCACAGATGATCGTACCTCTAGGAATGCAGCAGCAGCAGCAGCAGCTTCAAGTGTCGCTGCTCGCAGCTCGTATGGGACTGCTTGACACTGCTTCAATGGCTTCCAGTTCCAGTTCCTTCCCTTGTGCTGCTGCATGTTCTCCGACTCTACTGCCTTCCATCATCTCATCAACAAAGCCAAAATCTAAACTTTCCACCTCTGCTTTCGTCCCTCCAACCGATCCTTTCTGCACTTTTCTGGCACAATCAATGGATATGGATCTGTACAGTAAAATGGTGACACTATATTGCCAAGAAGTGAACAGGACACCTCGGCAGACAAGCAAATTAATGGAATCACAATGTGTAGAAGGGATCGAGGAGGATATGCATCAGAGCTAG MDSWPQKCVFPVTNVSLSPSQSCNRLSINLSAEENGRGPTSFFHNSLHLVCSISTLINQTFIASSAPTCSSDGAPWAKYEAVERTWESGDQEAAVDGHGEVVLQMASTKHSWGQSEDTLESIVHSSLLRKRTRSNPEGKDETFTSGAFSESHRSFKAKNSIEDLAPDDGSEDEHNTKRKTSGSCSIRRTQSERRRRDRINQKLKDLQKLVPNRSKTDRASLLDDTIQYLKQLKAQVQFMCSIRSDVPQMIVPLGMQQQQQQLQVSLLAARMGLLDTASMASSSSSFPCAAACSPTLLPSIISSTKPKSKLSTSAFVPPTDPFCTFLAQSMDMDLYSKMVTLYCQEVNRTPRQTSKLMESQCVEGIEEDMHQS Homology
BLAST of Csor.00g284820 vs. ExPASy Swiss-Prot
Match: Q570R7 (Transcription factor PIF7 OS=Arabidopsis thaliana OX=3702 GN=BHLH72 PE=1 SV=2) HSP 1 Score: 102.4 bits (254), Expect = 1.1e-20 Identity = 114/360 (31.67%), Postives = 169/360 (46.94%), Query Frame = 0
BLAST of Csor.00g284820 vs. ExPASy Swiss-Prot
Match: Q8GZ38 (Transcription factor UNE10 OS=Arabidopsis thaliana OX=3702 GN=UNE10 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 7.1e-20 Identity = 94/234 (40.17%), Postives = 124/234 (52.99%), Query Frame = 0
BLAST of Csor.00g284820 vs. ExPASy Swiss-Prot
Match: Q0JNI9 (Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15 OS=Oryza sativa subsp. japonica OX=39947 GN=PIL15 PE=1 SV=2) HSP 1 Score: 68.2 bits (165), Expect = 2.3e-10 Identity = 60/162 (37.04%), Postives = 85/162 (52.47%), Query Frame = 0
BLAST of Csor.00g284820 vs. ExPASy Swiss-Prot
Match: Q9SVU6 (Transcription factor bHLH23 OS=Arabidopsis thaliana OX=3702 GN=BHLH23 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.6e-08 Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of Csor.00g284820 vs. ExPASy Swiss-Prot
Match: Q8GT73 (Transcription factor bHLH119 OS=Arabidopsis thaliana OX=3702 GN=BHLH119 PE=2 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 1.6e-08 Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 0
BLAST of Csor.00g284820 vs. NCBI nr
Match: KAG6589529.1 (Transcription factor UNE10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 713 bits (1841), Expect = 9.00e-259 Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0
BLAST of Csor.00g284820 vs. NCBI nr
Match: KAG7023214.1 (Transcription factor UNE10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 566 bits (1458), Expect = 3.15e-201 Identity = 314/372 (84.41%), Postives = 318/372 (85.48%), Query Frame = 0
BLAST of Csor.00g284820 vs. NCBI nr
Match: XP_022921401.1 (transcription factor PIF7-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 548 bits (1413), Expect = 3.74e-194 Identity = 293/305 (96.07%), Postives = 295/305 (96.72%), Query Frame = 0
BLAST of Csor.00g284820 vs. NCBI nr
Match: XP_022988525.1 (transcription factor PIF7-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 542 bits (1396), Expect = 1.50e-191 Identity = 292/306 (95.42%), Postives = 297/306 (97.06%), Query Frame = 0
BLAST of Csor.00g284820 vs. NCBI nr
Match: XP_022921402.1 (transcription factor UNE10-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 511 bits (1316), Expect = 1.17e-179 Identity = 274/279 (98.21%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of Csor.00g284820 vs. ExPASy TrEMBL
Match: A0A6J1E1A4 (transcription factor PIF7-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429694 PE=4 SV=1) HSP 1 Score: 548 bits (1413), Expect = 1.81e-194 Identity = 293/305 (96.07%), Postives = 295/305 (96.72%), Query Frame = 0
BLAST of Csor.00g284820 vs. ExPASy TrEMBL
Match: A0A6J1JJT0 (transcription factor PIF7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485739 PE=4 SV=1) HSP 1 Score: 542 bits (1396), Expect = 7.28e-192 Identity = 292/306 (95.42%), Postives = 297/306 (97.06%), Query Frame = 0
BLAST of Csor.00g284820 vs. ExPASy TrEMBL
Match: A0A6J1E0D1 (transcription factor UNE10-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429694 PE=4 SV=1) HSP 1 Score: 511 bits (1316), Expect = 5.66e-180 Identity = 274/279 (98.21%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of Csor.00g284820 vs. ExPASy TrEMBL
Match: A0A6J1JHF6 (transcription factor UNE10-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485739 PE=4 SV=1) HSP 1 Score: 505 bits (1301), Expect = 1.13e-177 Identity = 273/280 (97.50%), Postives = 276/280 (98.57%), Query Frame = 0
BLAST of Csor.00g284820 vs. ExPASy TrEMBL
Match: A0A0A0LSD5 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011540 PE=4 SV=1) HSP 1 Score: 399 bits (1026), Expect = 5.59e-136 Identity = 232/310 (74.84%), Postives = 256/310 (82.58%), Query Frame = 0
BLAST of Csor.00g284820 vs. TAIR 10
Match: AT5G61270.1 (phytochrome-interacting factor7 ) HSP 1 Score: 102.4 bits (254), Expect = 7.8e-22 Identity = 114/360 (31.67%), Postives = 169/360 (46.94%), Query Frame = 0
BLAST of Csor.00g284820 vs. TAIR 10
Match: AT4G00050.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 99.8 bits (247), Expect = 5.0e-21 Identity = 94/234 (40.17%), Postives = 124/234 (52.99%), Query Frame = 0
BLAST of Csor.00g284820 vs. TAIR 10
Match: AT5G61270.2 (phytochrome-interacting factor7 ) HSP 1 Score: 89.4 bits (220), Expect = 6.8e-18 Identity = 95/291 (32.65%), Postives = 140/291 (48.11%), Query Frame = 0
BLAST of Csor.00g284820 vs. TAIR 10
Match: AT4G28811.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 1.2e-09 Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 0
BLAST of Csor.00g284820 vs. TAIR 10
Match: AT4G28790.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 1.2e-09 Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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