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Csor.00g284590 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCCTGTGTTGACAGCAGGAAGCGGCTACGGGATGAATCCAATGATTCTCTCTTCAATTTTATCGGATCCAACTCTAAGTTCGTCCGACTTGATTCCGCTAACTTGGATGTGGATGATGCGCCGATTGCTTCCGTTTCATCGGATGCGAAATCGATCGATTCTTCAGGCCTCGATTCGTTTCAGGCAAACTTAATTCAGGATGACCTGCTGAAGATTCTCGACGACGTCGATGCTTACATAGATCGCGAGTTGGAGATTCAAGATCTCGACTCGGTGATTAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTTCCTTCTGTTCAGCCCGAACTTGGATTCCTTCTGGAAGCGTCGGACGATGAATTAGGGCTTCCGCCGGCTGGTGAGAAAGAGGAGACCGAGGCCGTTAACTTCGCGGCAGAGTTTTTAGGTAGCGGCGGTATGAAAGGAATTTTAGGGCTTGAGGATGAAACTGTTCCGAATTACTGTTGGCTTGAGAATTTGAGGAGTGAGAACGAATGGAATCGAGAGGAGGAGGAAGAGGTGGTGGTGTTGGGTGGATTGTTCGATCATACAGACGTGGCGACGGAATTGGCGTATCGATCGGAGACCATGCCTTGTTTGTAA ATGGAAGCCTGTGTTGACAGCAGGAAGCGGCTACGGGATGAATCCAATGATTCTCTCTTCAATTTTATCGGATCCAACTCTAAGTTCGTCCGACTTGATTCCGCTAACTTGGATGTGGATGATGCGCCGATTGCTTCCGTTTCATCGGATGCGAAATCGATCGATTCTTCAGGCCTCGATTCGTTTCAGGCAAACTTAATTCAGGATGACCTGCTGAAGATTCTCGACGACGTCGATGCTTACATAGATCGCGAGTTGGAGATTCAAGATCTCGACTCGGTGATTAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTTCCTTCTGTTCAGCCCGAACTTGGATTCCTTCTGGAAGCGTCGGACGATGAATTAGGGCTTCCGCCGGCTGGTGAGAAAGAGGAGACCGAGGCCGTTAACTTCGCGGCAGAGTTTTTAGGTAGCGGCGGTATGAAAGGAATTTTAGGGCTTGAGGATGAAACTGTTCCGAATTACTGTTGGCTTGAGAATTTGAGGAGTGAGAACGAATGGAATCGAGAGGAGGAGGAAGAGGTGGTGGTGTTGGGTGGATTGTTCGATCATACAGACGTGGCGACGGAATTGGCGTATCGATCGGAGACCATGCCTTGTTTGTAA ATGGAAGCCTGTGTTGACAGCAGGAAGCGGCTACGGGATGAATCCAATGATTCTCTCTTCAATTTTATCGGATCCAACTCTAAGTTCGTCCGACTTGATTCCGCTAACTTGGATGTGGATGATGCGCCGATTGCTTCCGTTTCATCGGATGCGAAATCGATCGATTCTTCAGGCCTCGATTCGTTTCAGGCAAACTTAATTCAGGATGACCTGCTGAAGATTCTCGACGACGTCGATGCTTACATAGATCGCGAGTTGGAGATTCAAGATCTCGACTCGGTGATTAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTTCCTTCTGTTCAGCCCGAACTTGGATTCCTTCTGGAAGCGTCGGACGATGAATTAGGGCTTCCGCCGGCTGGTGAGAAAGAGGAGACCGAGGCCGTTAACTTCGCGGCAGAGTTTTTAGGTAGCGGCGGTATGAAAGGAATTTTAGGGCTTGAGGATGAAACTGTTCCGAATTACTGTTGGCTTGAGAATTTGAGGAGTGAGAACGAATGGAATCGAGAGGAGGAGGAAGAGGTGGTGGTGTTGGGTGGATTGTTCGATCATACAGACGTGGCGACGGAATTGGCGTATCGATCGGAGACCATGCCTTGTTTGTAA MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSSGLDSFQANLIQDDLLKILDDVDAYIDRELEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVVVLGGLFDHTDVATELAYRSETMPCL Homology
BLAST of Csor.00g284590 vs. NCBI nr
Match: KAG6589552.1 (hypothetical protein SDJN03_14975, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 407 bits (1046), Expect = 5.01e-143 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of Csor.00g284590 vs. NCBI nr
Match: XP_023516749.1 (uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 399 bits (1024), Expect = 1.13e-139 Identity = 206/210 (98.10%), Postives = 208/210 (99.05%), Query Frame = 0
BLAST of Csor.00g284590 vs. NCBI nr
Match: KAG7023238.1 (hypothetical protein SDJN02_14263, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 387 bits (995), Expect = 2.50e-135 Identity = 203/210 (96.67%), Postives = 203/210 (96.67%), Query Frame = 0
BLAST of Csor.00g284590 vs. NCBI nr
Match: XP_022921385.1 (uncharacterized protein LOC111429674 [Cucurbita moschata]) HSP 1 Score: 384 bits (987), Expect = 4.14e-134 Identity = 202/210 (96.19%), Postives = 202/210 (96.19%), Query Frame = 0
BLAST of Csor.00g284590 vs. NCBI nr
Match: XP_038890344.1 (uncharacterized protein LOC120079943 [Benincasa hispida]) HSP 1 Score: 285 bits (729), Expect = 7.48e-95 Identity = 161/214 (75.23%), Postives = 176/214 (82.24%), Query Frame = 0
BLAST of Csor.00g284590 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1) HSP 1 Score: 384 bits (987), Expect = 2.00e-134 Identity = 202/210 (96.19%), Postives = 202/210 (96.19%), Query Frame = 0
BLAST of Csor.00g284590 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1) HSP 1 Score: 261 bits (668), Expect = 1.27e-85 Identity = 150/215 (69.77%), Postives = 165/215 (76.74%), Query Frame = 0
BLAST of Csor.00g284590 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1) HSP 1 Score: 260 bits (664), Expect = 2.62e-85 Identity = 150/215 (69.77%), Postives = 164/215 (76.28%), Query Frame = 0
BLAST of Csor.00g284590 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1) HSP 1 Score: 260 bits (664), Expect = 5.13e-85 Identity = 150/215 (69.77%), Postives = 164/215 (76.28%), Query Frame = 0
BLAST of Csor.00g284590 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1) HSP 1 Score: 250 bits (638), Expect = 2.69e-81 Identity = 149/219 (68.04%), Postives = 162/219 (73.97%), Query Frame = 0
BLAST of Csor.00g284590 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.9 bits (185), Expect = 4.4e-14 Identity = 64/181 (35.36%), Postives = 90/181 (49.72%), Query Frame = 0
BLAST of Csor.00g284590 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12 Identity = 55/137 (40.15%), Postives = 71/137 (51.82%), Query Frame = 0
BLAST of Csor.00g284590 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12 Identity = 55/137 (40.15%), Postives = 71/137 (51.82%), Query Frame = 0
BLAST of Csor.00g284590 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 3.1e-07 Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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