Csor.00g284470 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g284470
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr10: 1180499 .. 1181530 (-)
RNA-Seq ExpressionCsor.00g284470
SyntenyCsor.00g284470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCAATGGATTTGGACCAGTCGGGACGAGTCGTTTTTCGACGCCGTACCGGGGATCGATCTCCGCTGCAGCTGGGGGAGAATTGGTGTGATGGTGGCGGTGGTGGTGATGGCGATCACGTCGTTGATGGAGATGGTGAAGGAAGATGGTGAAGTCAAATTTGAGCTTTCTGTTGAGAGAAAAGGAGGAGTTATTTGGGTTGGCATGGAGAGGAAGGGCATGAAAGAGGAAGGTTGAAGAGGAAAGAAGGAGGAGGAGAGTAATGAATTTGCAGAGGGTCAAAGGCATTATGGATAATAGTAATGACAAGAGAATGGGTGTGGAGAGGGAGAAGGAGAGAAAGGACTGCATGGAGAGGAAAAAGAAGAGCAAGAAGAAAAGGGAATTAGAGAAGTAAATGAGAAAGGAGGATTTAGCGTAAGAAATGTTGAAGGAGAAGAAGGTTGACATTGAAGAAGAGAGAGAGGGAGAGAGAAAGGAGGGGACAAAACTGTGGAGAATTCTTGTTTCAATGACAACTTCCTTTGCGTTGAAGGAACAAAGCCTCATTTAAAGCAGATTGTCAAACTTTGAATTATATATTACCAAAACCCATTGACAGAGACACAGAGAGATTATAAAAAAGAATAGAAGGAAGAAGGGAAAGAGAAGAGCTGACTTCTGAATGCAACTTTAAATTTTATCAAAGTTTAGAAGTGGGTGTGTGGGATGGTGGCTGGTTTGCAGATTTCAAGGTACAACTCATACATACTATTACCATATTCTTAATTTTCAGATAGGAAATGCTTCCTATTTCTCCCTCCCTACTATTGTAATCTCGAAACCTTCTTTATAAGGGTGTATAAATCTCTCCCTAACAGATGCGTTTTAAAACTATGAGGCTGACTAATCTATTAGCGGTGTAGACTGTTGTAGGCTCTAAGGCTTTAACTAGGTGTGTGCCAAGGTGTGTGCCAATTGCGCCTGGTTGAGATGGATATGGGTGGTGGTGGTGGTGCTTGGAATAAGGGAAGCCAACCAGGAGAGTAA

mRNA sequence

ATGGTGCAATGGATTTGGACCAGTCGGGACGAGTCGTTTTTCGACGCCGTACCGGGGATCGATCTCCGCTGCAGCTGGGGGAGAATTGGTGTGATGGTGGCGGTGGTGGTGATGGCGATCACGTCGTTGATGGAGATGGTGAAGGAAGATGGTGAAGTCAAATTTGAGCTTTCTGTTGAGAGAAAAGGAGGAGTTATTTGGGTTGGCATGGAGAGGAAGGGCATGAAAGAGGAAGGTGTGTGCCAATTGCGCCTGGTTGAGATGGATATGGGTGGTGGTGGTGGTGCTTGGAATAAGGGAAGCCAACCAGGAGAGTAA

Coding sequence (CDS)

ATGGTGCAATGGATTTGGACCAGTCGGGACGAGTCGTTTTTCGACGCCGTACCGGGGATCGATCTCCGCTGCAGCTGGGGGAGAATTGGTGTGATGGTGGCGGTGGTGGTGATGGCGATCACGTCGTTGATGGAGATGGTGAAGGAAGATGGTGAAGTCAAATTTGAGCTTTCTGTTGAGAGAAAAGGAGGAGTTATTTGGGTTGGCATGGAGAGGAAGGGCATGAAAGAGGAAGGTGTGTGCCAATTGCGCCTGGTTGAGATGGATATGGGTGGTGGTGGTGGTGCTTGGAATAAGGGAAGCCAACCAGGAGAGTAA

Protein sequence

MVQWIWTSRDESFFDAVPGIDLRCSWGRIGVMVAVVVMAITSLMEMVKEDGEVKFELSVERKGGVIWVGMERKGMKEEGVCQLRLVEMDMGGGGGAWNKGSQPGE
Homology
[Close]
BLAST of Csor.00g284470 vs. NCBI nr
Match: KAG6589564.1 (hypothetical protein SDJN03_14987, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216 bits (549), Expect = 1.15e-70
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MVQWIWTSRDESFFDAVPGIDLRCSWGRIGVMVAVVVMAITSLMEMVKEDGEVKFELSVE 60
           MVQWIWTSRDESFFDAVPGIDLRCSWGRIGVMVAVVVMAITSLMEMVKEDGEVKFELSVE
Sbjct: 1   MVQWIWTSRDESFFDAVPGIDLRCSWGRIGVMVAVVVMAITSLMEMVKEDGEVKFELSVE 60

Query: 61  RKGGVIWVGMERKGMKEEGVCQLRLVEMDMGGGGGAWNKGSQPGE 105
           RKGGVIWVGMERKGMKEEGVCQLRLVEMDMGGGGGAWNKGSQPGE
Sbjct: 61  RKGGVIWVGMERKGMKEEGVCQLRLVEMDMGGGGGAWNKGSQPGE 105

[Close]
BLAST of Csor.00g284470 vs. NCBI nr
Match: KAG6587626.1 (hypothetical protein SDJN03_16191, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.1 bits (183), Expect = 9.09e-15
Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = 0 

Query: 1  MVQWIWTSRDESFFDAVPGIDLRCSWGRIGVMVAV-VVMAITSLMEMVKEDGEVKF---E 60
          MVQW+WT RDESFFDA+PGIDL CS GR G  V + VV+ +  ++  V + GEVKF   E
Sbjct: 1  MVQWVWTRRDESFFDAIPGIDLGCSRGRGGERVGMGVVVVVVEVVVTVVKGGEVKFRRQE 60

Query: 61 LSVERKGGVIWVGMERKGMKEEGV 80
          LS   K    W  ++R  M E+GV
Sbjct: 61 LSGMGKRWGFWNVVKRSSMTEDGV 84

The following BLAST results are available for this feature:
BLAST of Csor.00g284470 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g284470 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589564.11.15e-70100.00hypothetical protein SDJN03_14987, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6587626.19.09e-1551.19hypothetical protein SDJN03_16191, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g284470 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g284470 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g284470.m01Csor.00g284470.m01mRNA