Csor.00g283560 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g283560
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	mitochondrial import receptor subunit TOM7-1-like
Location	Csor_Chr10: 1666332 .. 1666553 (-)
RNA-Seq Expression	Csor.00g283560
Synteny	Csor.00g283560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGAAGGTTTCTCTTAGAAGCAAGGGCAAGAGCTCCAAGGGCTCATCGAAGTCATCTGAGGATAAATCCACAACCCAAGCCTTCAAGGAGTGGACTACTTGGGCCGTAAAGAAAGCCAAGGTCATCACTCACTATGGCTTTATTCCTCTGGTTATCATCATCGGCATGAACTCCGAGCCAAAGCCTCAGCTTTCCCAGCTTCTCAGCCCCGTCTGA

mRNA sequence

ATGGCGTCGAAGGTTTCTCTTAGAAGCAAGGGCAAGAGCTCCAAGGGCTCATCGAAGTCATCTGAGGATAAATCCACAACCCAAGCCTTCAAGGAGTGGACTACTTGGGCCGTAAAGAAAGCCAAGGTCATCACTCACTATGGCTTTATTCCTCTGGTTATCATCATCGGCATGAACTCCGAGCCAAAGCCTCAGCTTTCCCAGCTTCTCAGCCCCGTCTGA

Coding sequence (CDS)

ATGGCGTCGAAGGTTTCTCTTAGAAGCAAGGGCAAGAGCTCCAAGGGCTCATCGAAGTCATCTGAGGATAAATCCACAACCCAAGCCTTCAAGGAGTGGACTACTTGGGCCGTAAAGAAAGCCAAGGTCATCACTCACTATGGCTTTATTCCTCTGGTTATCATCATCGGCATGAACTCCGAGCCAAAGCCTCAGCTTTCCCAGCTTCTCAGCCCCGTCTGA

Protein sequence

MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEPKPQLSQLLSPV

Homology

[Close]

BLAST of Csor.00g283560 vs. ExPASy Swiss-Prot
Match: Q9ASY8 (Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana OX=3702 GN=TOM7-1 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.0e-18
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 1  MASKVSL---RSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIG 60
          M S +SL   + KGK SKG+S SS+DKS     KEWT W++KKAKV+THYGFIPLVI +G
Sbjct: 1  MESTISLKVNKGKGKGSKGAS-SSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVG 60

Query: 61 MNSEPKPQLSQLLSPV 74
          MNS+PKP L QLLSPV
Sbjct: 61 MNSDPKPHLFQLLSPV 75

[Close]

BLAST of Csor.00g283560 vs. ExPASy Swiss-Prot
Match: Q3ECI7 (Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana OX=3702 GN=TOM7-2 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-16
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 1  MASKVSLRSKGKS--SKGSSKSSEDKSTT--QAFKEWTTWAVKKAKVITHYGFIPLVIII 60
          MA+K +L+ KGK+  SKGSS SS   +++  + FK+WT W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 61 GMNSEPKPQLSQLLSPV 74
          GMNS+PKP L  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77

[Close]

BLAST of Csor.00g283560 vs. ExPASy Swiss-Prot
Match: O82067 (Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum OX=4113 GN=TOM7-1 PE=3 SV=3)

HSP 1 Score: 85.1 bits (209), Expect = 3.6e-16
Identity = 46/71 (64.79%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 7  LRSKGKSSKGSSKSSEDKSTT----QAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEP 66
          L+ KGK++K ++ + ED        +  KEW TW  KKAKVITHYGFIPLVIIIGMNSEP
Sbjct: 2  LKPKGKNTKKAAAADEDDGAVAVVGKFVKEWGTWTAKKAKVITHYGFIPLVIIIGMNSEP 61

Query: 67 KPQLSQLLSPV 74
          KP LSQLLSPV
Sbjct: 62 KPSLSQLLSPV 72

[Close]

BLAST of Csor.00g283560 vs. NCBI nr
Match: XP_022921829.1 (mitochondrial import receptor subunit TOM7-1-like [Cucurbita moschata] >XP_022988536.1 mitochondrial import receptor subunit TOM7-1-like [Cucurbita maxima] >XP_023516449.1 mitochondrial import receptor subunit TOM7-1-like [Cucurbita pepo subsp. pepo] >KAG6589655.1 Mitochondrial import receptor subunit TOM7-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023343.1 Mitochondrial import receptor subunit TOM7-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138 bits (347), Expect = 7.66e-41
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 73
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Csor.00g283560 vs. NCBI nr
Match: XP_038879584.1 (mitochondrial import receptor subunit TOM7-1-like [Benincasa hispida])

HSP 1 Score: 133 bits (335), Expect = 5.20e-39
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKGSSKSSE+KS TQ+FKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKGSSKSSEEKSATQSFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 73
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Csor.00g283560 vs. NCBI nr
Match: XP_022973450.1 (mitochondrial import receptor subunit TOM7-1-like [Cucurbita maxima])

HSP 1 Score: 132 bits (332), Expect = 1.49e-38
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MAS VSL+SKGKSSKGSSKSSE KSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASNVSLKSKGKSSKGSSKSSEGKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 73
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Csor.00g283560 vs. NCBI nr
Match: XP_008455820.1 (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Cucumis melo] >TYJ98347.1 mitochondrial import receptor subunit TOM7-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (332), Expect = 1.49e-38
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSK SSKSSE+KS TQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 73
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Csor.00g283560 vs. NCBI nr
Match: XP_004151870.1 (mitochondrial import receptor subunit TOM7-1 [Cucumis sativus])

HSP 1 Score: 132 bits (331), Expect = 2.12e-38
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSK SSKSSE+KS TQAFKEWTTWAVKKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 73
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Csor.00g283560 vs. ExPASy TrEMBL
Match: A0A6J1JHG5 (mitochondrial import receptor subunit TOM7-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485747 PE=3 SV=1)

HSP 1 Score: 138 bits (347), Expect = 3.71e-41
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 73
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Csor.00g283560 vs. ExPASy TrEMBL
Match: A0A6J1E1M9 (mitochondrial import receptor subunit TOM7-1-like OS=Cucurbita moschata OX=3662 GN=LOC111429970 PE=3 SV=1)

HSP 1 Score: 138 bits (347), Expect = 3.71e-41
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 73
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Csor.00g283560 vs. ExPASy TrEMBL
Match: A0A6J1IBD9 (mitochondrial import receptor subunit TOM7-1-like OS=Cucurbita maxima OX=3661 GN=LOC111471989 PE=3 SV=1)

HSP 1 Score: 132 bits (332), Expect = 7.22e-39
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MAS VSL+SKGKSSKGSSKSSE KSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASNVSLKSKGKSSKGSSKSSEGKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 73
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Csor.00g283560 vs. ExPASy TrEMBL
Match: A0A5D3BGU9 (Mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00780 PE=3 SV=1)

HSP 1 Score: 132 bits (332), Expect = 7.22e-39
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSK SSKSSE+KS TQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 73
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Csor.00g283560 vs. ExPASy TrEMBL
Match: A0A1S3C1D2 (mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo OX=3656 GN=LOC103495918 PE=3 SV=1)

HSP 1 Score: 132 bits (332), Expect = 7.22e-39
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSK SSKSSE+KS TQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 73
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Csor.00g283560 vs. TAIR 10
Match: AT5G41685.1 (Mitochondrial outer membrane translocase complex, subunit Tom7 )

HSP 1 Score: 91.3 bits (225), Expect = 3.5e-19
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 1  MASKVSL---RSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIG 60
          M S +SL   + KGK SKG+S SS+DKS     KEWT W++KKAKV+THYGFIPLVI +G
Sbjct: 1  MESTISLKVNKGKGKGSKGAS-SSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVG 60

Query: 61 MNSEPKPQLSQLLSPV 74
          MNS+PKP L QLLSPV
Sbjct: 61 MNSDPKPHLFQLLSPV 75

[Close]

BLAST of Csor.00g283560 vs. TAIR 10
Match: AT1G64220.1 (translocase of outer membrane 7 kDa subunit 2 )

HSP 1 Score: 85.9 bits (211), Expect = 1.5e-17
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 1  MASKVSLRSKGKS--SKGSSKSSEDKSTT--QAFKEWTTWAVKKAKVITHYGFIPLVIII 60
          MA+K +L+ KGK+  SKGSS SS   +++  + FK+WT W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 61 GMNSEPKPQLSQLLSPV 74
          GMNS+PKP L  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77

The following BLAST results are available for this feature:

BLAST of Csor.00g283560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASY8	5.0e-18	65.79	Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q3ECI7	2.1e-16	61.04	Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O82067	3.6e-16	64.79	Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum OX=4113 GN=TOM...	[more]

BLAST of Csor.00g283560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921829.1	7.66e-41	100.00	mitochondrial import receptor subunit TOM7-1-like [Cucurbita moschata] >XP_02298...	[more]
XP_038879584.1	5.20e-39	95.89	mitochondrial import receptor subunit TOM7-1-like [Benincasa hispida]	[more]
XP_022973450.1	1.49e-38	95.89	mitochondrial import receptor subunit TOM7-1-like [Cucurbita maxima]	[more]
XP_008455820.1	1.49e-38	95.89	PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Cucumis melo] >TYJ...	[more]
XP_004151870.1	2.12e-38	94.52	mitochondrial import receptor subunit TOM7-1 [Cucumis sativus]	[more]

BLAST of Csor.00g283560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHG5	3.71e-41	100.00	mitochondrial import receptor subunit TOM7-1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1E1M9	3.71e-41	100.00	mitochondrial import receptor subunit TOM7-1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1IBD9	7.22e-39	95.89	mitochondrial import receptor subunit TOM7-1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A5D3BGU9	7.22e-39	95.89	Mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3C1D2	7.22e-39	95.89	mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Csor.00g283560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41685.1	3.5e-19	65.79	Mitochondrial outer membrane translocase complex, subunit Tom7	[more]
AT1G64220.1	1.5e-17	61.04	translocase of outer membrane 7 kDa subunit 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012621	Mitochondrial import receptor subunit TOM7	PFAM	PF08038	Tom7	coord: 31..70 e-value: 2.2E-17 score: 62.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR34944:SF2	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7	coord: 1..73
None	No IPR available	PANTHER	PTHR34944	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g283560.m01	Csor.00g283560.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex