Csor.00g282980 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g282980
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionthylakoid lumenal 17.4 kDa protein, chloroplastic-like
LocationCsor_Chr16: 164242 .. 165999 (+)
RNA-Seq ExpressionCsor.00g282980
SyntenyCsor.00g282980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGTCGGCAGAGCGAGCGGGAGGGAATTCATTTTTCCAAATGGCGACTTTATCAATTCCATTCTCTCAGAATGGTTTCTCTCGCAGGTTCTTCTCTGCAAAGCACCCACCAGTTACAGCCCCATTTTCCCATTCGCTCGCCCCTATCAGTTGCTCAGGTTACCATTTCTTCTATCTGCTTCGAGTTTTTTCTGTCTCAACTTTTACGTACTTTGTCTTTGAACACTTGTTTAATGCGTTTGTTTACTCGAATAATTGCTACACTGAGTACCCTTTTGTGGGTAAATTGCGTCAGAGTCTGGGGAGAACTGTTTTCTTCTTCTCGGATCTTATGTTGTTAGGCTTAGAACTGTTTTCTCCTGAAATGTGCTTAGCTGAATGCTGTTTGAAATCTTCACCACGTAGAGGGAAAGGAAAGGAATATCGTGCGAACTGGACTTTAACTGAATGTGTATCCAAGCATTATGAGTTATATTTTAATGGAGCCTTTTCTGGCATACCATTTTATTAACTGATGAAAAAAGCGTTCGTGTCCTGCAATTACAGCTAATAGGAATGGGGCAGAACCAAGAGAGATCTTGTCACCCTGCAAGCATATTGGCTCTGTAGCTTGTGGTCTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGCGTTTGCAGCTAATCAGGTTAATAGCTTTTGGGTTTAGTACTGATTTAACCATTGACATGACTTCTTAGATATTCAAACTTACCATGATGTTTGGGTACATAAGCCAAAAACTTATCATGAAGTTAAATTTAGGCTTAAGATGTCAAACCTAGTTACTCTCCAGGGATTGAATGTGTAATTTGGATTGGAAGCCCTGCTTTCTACTTCACCAATCTTTCTATTGATATGCAGTTCATCGTCCTTCGGATACTCTTTATTTTTTTTGCGTTCTTCCTTTCCTAGTCATGATTGATAAGCATCGTCCACTTTCTGTGGCAAACATCAAACAACTTATAATATTTGAGTTTGAAGAAGAAAGCTGTTGAACTCATAATATCCGGGACTTGCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAGAGGCAGTTAAAAGGGAAATCTCTTGCTGCTGCGTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTGATGTCAAAAGCCTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCTCACCCCCACTCGAATAGGGAGGTGGGTTGGTAACAAATCTTCATGTTCTAGCACGAATATGGCTTTAAGAATGACTTAGTTTCCAAAGAAGCGCATCTAGTGCTTCCAATACTTGATATGGTACATAGACAAAATCCACGAGTTCAACACATGCTAGCTTACAGAATAAATCCCAGCCTCCTAATAATATGGCTTTTAAGTATACGAGTACATATTGCAGGTGTTGATTTCTCGAATGCAGTTCTAGACAGGGTAAATTTTGGAAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTACTTTCAGGGTCCACATTTGATGATGCTGAGTTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAGCTTTGTGTAAATCCAACTATCAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

mRNA sequence

ATGGATAAGTCGGCAGAGCGAGCGGGAGGGAATTCATTTTTCCAAATGGCGACTTTATCAATTCCATTCTCTCAGAATGGTTTCTCTCGCAGGTTCTTCTCTGCAAAGCACCCACCAGTTACAGCCCCATTTTCCCATTCGCTCGCCCCTATCAGTTGCTCAGCTAATAGGAATGGGGCAGAACCAAGAGAGATCTTGTCACCCTGCAAGCATATTGGCTCTGTAGCTTGTGGTCTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGCGTTTGCAGCTAATCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAGAGGCAGTTAAAAGGGAAATCTCTTGCTGCTGCGTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTGATGTCAAAAGCCTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCGAATGCAGTTCTAGACAGGGTAAATTTTGGAAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTACTTTCAGGGTCCACATTTGATGATGCTGAGTTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAGCTTTGTGTAAATCCAACTATCAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Coding sequence (CDS)

ATGGATAAGTCGGCAGAGCGAGCGGGAGGGAATTCATTTTTCCAAATGGCGACTTTATCAATTCCATTCTCTCAGAATGGTTTCTCTCGCAGGTTCTTCTCTGCAAAGCACCCACCAGTTACAGCCCCATTTTCCCATTCGCTCGCCCCTATCAGTTGCTCAGCTAATAGGAATGGGGCAGAACCAAGAGAGATCTTGTCACCCTGCAAGCATATTGGCTCTGTAGCTTGTGGTCTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGCGTTTGCAGCTAATCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAGAGGCAGTTAAAAGGGAAATCTCTTGCTGCTGCGTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTGATGTCAAAAGCCTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCGAATGCAGTTCTAGACAGGGTAAATTTTGGAAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTACTTTCAGGGTCCACATTTGATGATGCTGAGTTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAGCTTTGTGTAAATCCAACTATCAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Protein sequence

MDKSAERAGGNSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAEPREILSPCKHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Homology
BLAST of Csor.00g282980 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2)

HSP 1 Score: 302.8 bits (774), Expect = 3.7e-81
Identity = 155/242 (64.05%), Postives = 187/242 (77.27%), Query Frame = 0

Query: 16  MATLSIPFSQNGFSRRFFSA--KHPPVTAPFSHSLAPISCSA---NRNGAEPREILSPCK 75
           MA+L + F++N  S  FFS   +  P       SL  + CSA     NG   ++ L P K
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLRREP------RSLVTVHCSAGENRENGEGVKKSLFPLK 60

Query: 76  HIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDL 135
            +GS+AC  L    LT  SP  AANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DL
Sbjct: 61  ELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDL 120

Query: 136 RFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV 195
           RFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRV
Sbjct: 121 RFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRV 180

Query: 196 NFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELG 253
           NFGK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LG
Sbjct: 181 NFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLG 236

BLAST of Csor.00g282980 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-10
Identity = 47/157 (29.94%), Postives = 72/157 (45.86%), Query Frame = 0

Query: 100 PLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDG 159
           P   E NR E A      G  +       DL    ++NE    +  +  +A M E+ F G
Sbjct: 87  PAMAELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSADMRESDFSG 146

Query: 160 ADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQD 219
           +  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S    A+++ 
Sbjct: 147 STFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEG 206

Query: 220 AVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 252
           A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 207 ADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

BLAST of Csor.00g282980 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.7e-07
Identity = 35/119 (29.41%), Postives = 57/119 (47.90%), Query Frame = 0

Query: 144 GKSLAAAL-----MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQ 203
           GKSL  A      ++++ F  ADL   V + +  +GA   G D +N +    +F  A+L 
Sbjct: 61  GKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTSFKGADLT 120

Query: 204 GALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGCR 253
            A+    ++  + FDDA++  A F   ++   ++ KLC     VNP      R  LGC+
Sbjct: 121 NAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVSTRESLGCQ 179

BLAST of Csor.00g282980 vs. ExPASy Swiss-Prot
Match: P74221 (Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1152 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 7.5e-05
Identity = 31/98 (31.63%), Postives = 52/98 (53.06%), Query Frame = 0

Query: 141 QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGA 200
           Q+    L  A +++A    ADL++  +  A+AV  +FKG   S A L       ANL+GA
Sbjct: 91  QMNWADLTYAKLNQADLSHADLTKASLYGAFAVKTNFKGAKLSGATL-----AHANLRGA 150

Query: 201 LFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVN 239
             + T L+G+    A L++A F+     + +LQ+ C++
Sbjct: 151 NLEQTNLTGANLFAANLREANFQKADFSWANLQEACLS 183

BLAST of Csor.00g282980 vs. ExPASy Swiss-Prot
Match: P81778 (Thylakoid lumenal 17.4 kDa protein (Fragment) OS=Spinacia oleracea OX=3562 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 2.2e-04
Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 0

Query: 94  ANQRLPPLSTEPNRCERAFVGNT 117
           ANQRLPPLS +P+RCERAFVGNT
Sbjct: 1   ANQRLPPLSNDPDRCERAFVGNT 23

BLAST of Csor.00g282980 vs. NCBI nr
Match: KAG6576642.1 (Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014695.1 Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506 bits (1304), Expect = 5.84e-181
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0

Query: 1   MDKSAERAGGNSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGA 60
           MDKSAERAGGNSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGA
Sbjct: 1   MDKSAERAGGNSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGA 60

Query: 61  EPREILSPCKHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQA 120
           EPREILSPCKHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQA
Sbjct: 61  EPREILSPCKHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQA 120

Query: 121 NGVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGV 180
           NGVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGV
Sbjct: 121 NGVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGV 180

Query: 181 DFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPT 240
           DFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPT
Sbjct: 181 DFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPT 240

Query: 241 ISPEGRAELGCR 252
           ISPEGRAELGCR
Sbjct: 241 ISPEGRAELGCR 252

BLAST of Csor.00g282980 vs. NCBI nr
Match: XP_022984509.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 486 bits (1250), Expect = 2.49e-172
Identity = 242/251 (96.41%), Postives = 245/251 (97.61%), Query Frame = 0

Query: 2   DKSAERAGGNSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAE 61
           DKSAERAGGNS FQMATLSIPFSQNGFSRRFFSAKHPP+ APFSHSLA ISCSANR+GAE
Sbjct: 27  DKSAERAGGNSSFQMATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRDGAE 86

Query: 62  PREILSPCKHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN 121
           PRE LSPC HIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN
Sbjct: 87  PRESLSPCNHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN 146

Query: 122 GVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD 181
           GVYDKPIDLRFCDYTNEK QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD
Sbjct: 147 GVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD 206

Query: 182 FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTI 241
           FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTI
Sbjct: 207 FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTI 266

Query: 242 SPEGRAELGCR 252
           SPEGRAELGCR
Sbjct: 267 SPEGRAELGCR 277

BLAST of Csor.00g282980 vs. NCBI nr
Match: XP_022923067.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 485 bits (1249), Expect = 4.09e-172
Identity = 241/251 (96.02%), Postives = 246/251 (98.01%), Query Frame = 0

Query: 2   DKSAERAGGNSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAE 61
           ++++ERAG NSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANR+GA 
Sbjct: 31  ERASERAGENSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRDGAV 90

Query: 62  PREILSPCKHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN 121
           PRE LSPC HIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN
Sbjct: 91  PRESLSPCNHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN 150

Query: 122 GVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD 181
           GVYDKPIDLRFCDYTNEK QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD
Sbjct: 151 GVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD 210

Query: 182 FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTI 241
           FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTI
Sbjct: 211 FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTI 270

Query: 242 SPEGRAELGCR 252
           SPEGRAELGCR
Sbjct: 271 SPEGRAELGCR 281

BLAST of Csor.00g282980 vs. NCBI nr
Match: XP_023553432.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 467 bits (1201), Expect = 1.70e-165
Identity = 233/237 (98.31%), Postives = 233/237 (98.31%), Query Frame = 0

Query: 16  MATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAEPREILSPCKHIGSV 75
           MATLSIPFSQNGFSRRFFSAKHPPV APFSHSLAPISCSANRNGAEPRE LSP KHIGSV
Sbjct: 1   MATLSIPFSQNGFSRRFFSAKHPPVIAPFSHSLAPISCSANRNGAEPRESLSPSKHIGSV 60

Query: 76  ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 135
           ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 136 TNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 195
           TNEK QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 196 NLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 252
           NLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g282980 vs. NCBI nr
Match: XP_008455988.1 (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 431 bits (1107), Expect = 3.62e-151
Identity = 214/237 (90.30%), Postives = 221/237 (93.25%), Query Frame = 0

Query: 16  MATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAEPREILSPCKHIGSV 75
           MATLSIP SQNGFSR FFS K P +  PF HSL  I+CSA R+GA+PRE LSPCKHI +V
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 76  ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 135
           ACGLLAVWALTNTSP  AANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 136 TNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 195
           TNEK QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 196 NLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 252
           NLQGALFKNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g282980 vs. ExPASy TrEMBL
Match: A0A6J1JAQ7 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482783 PE=4 SV=1)

HSP 1 Score: 486 bits (1250), Expect = 1.20e-172
Identity = 242/251 (96.41%), Postives = 245/251 (97.61%), Query Frame = 0

Query: 2   DKSAERAGGNSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAE 61
           DKSAERAGGNS FQMATLSIPFSQNGFSRRFFSAKHPP+ APFSHSLA ISCSANR+GAE
Sbjct: 27  DKSAERAGGNSSFQMATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRDGAE 86

Query: 62  PREILSPCKHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN 121
           PRE LSPC HIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN
Sbjct: 87  PRESLSPCNHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN 146

Query: 122 GVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD 181
           GVYDKPIDLRFCDYTNEK QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD
Sbjct: 147 GVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD 206

Query: 182 FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTI 241
           FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTI
Sbjct: 207 FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTI 266

Query: 242 SPEGRAELGCR 252
           SPEGRAELGCR
Sbjct: 267 SPEGRAELGCR 277

BLAST of Csor.00g282980 vs. ExPASy TrEMBL
Match: A0A6J1E548 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430851 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 1.98e-172
Identity = 241/251 (96.02%), Postives = 246/251 (98.01%), Query Frame = 0

Query: 2   DKSAERAGGNSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAE 61
           ++++ERAG NSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANR+GA 
Sbjct: 31  ERASERAGENSFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRDGAV 90

Query: 62  PREILSPCKHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN 121
           PRE LSPC HIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN
Sbjct: 91  PRESLSPCNHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQAN 150

Query: 122 GVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD 181
           GVYDKPIDLRFCDYTNEK QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD
Sbjct: 151 GVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVD 210

Query: 182 FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTI 241
           FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTI
Sbjct: 211 FSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTI 270

Query: 242 SPEGRAELGCR 252
           SPEGRAELGCR
Sbjct: 271 SPEGRAELGCR 281

BLAST of Csor.00g282980 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1)

HSP 1 Score: 431 bits (1107), Expect = 1.75e-151
Identity = 214/237 (90.30%), Postives = 221/237 (93.25%), Query Frame = 0

Query: 16  MATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAEPREILSPCKHIGSV 75
           MATLSIP SQNGFSR FFS K P +  PF HSL  I+CSA R+GA+PRE LSPCKHI +V
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 76  ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 135
           ACGLLAVWALTNTSP  AANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 136 TNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 195
           TNEK QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 196 NLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 252
           NLQGALFKNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g282980 vs. ExPASy TrEMBL
Match: A0A6J1G0I9 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449567 PE=4 SV=1)

HSP 1 Score: 422 bits (1086), Expect = 2.78e-148
Identity = 209/237 (88.19%), Postives = 220/237 (92.83%), Query Frame = 0

Query: 16  MATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAEPREILSPCKHIGSV 75
           MA LSIP SQNGFSR F+SAK P + +P + SLAPI+C A  +GAEP+E LSPCKHIG+V
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 76  ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 135
           ACGLLAVW LTNT+P  AA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 136 TNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 195
           TN+K QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 196 NLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 252
           NLQGALFKNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g282980 vs. ExPASy TrEMBL
Match: A0A0A0LC74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1)

HSP 1 Score: 421 bits (1081), Expect = 1.61e-147
Identity = 208/237 (87.76%), Postives = 217/237 (91.56%), Query Frame = 0

Query: 16  MATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAEPREILSPCKHIGSV 75
           MA LS P S NGFSR FFS +   +  PF HSL  I+CSA R+GAEPRE LSPCKHI +V
Sbjct: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60

Query: 76  ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 135
           ACGLLAVWALTNTSP  AANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 136 TNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 195
           TNEK QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 196 NLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 252
           NLQGALFKNTVLSGSTFDDA+L+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g282980 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 302.8 bits (774), Expect = 2.7e-82
Identity = 155/242 (64.05%), Postives = 187/242 (77.27%), Query Frame = 0

Query: 16  MATLSIPFSQNGFSRRFFSA--KHPPVTAPFSHSLAPISCSA---NRNGAEPREILSPCK 75
           MA+L + F++N  S  FFS   +  P       SL  + CSA     NG   ++ L P K
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLRREP------RSLVTVHCSAGENRENGEGVKKSLFPLK 60

Query: 76  HIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDL 135
            +GS+AC  L    LT  SP  AANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DL
Sbjct: 61  ELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDL 120

Query: 136 RFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV 195
           RFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRV
Sbjct: 121 RFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRV 180

Query: 196 NFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELG 253
           NFGK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LG
Sbjct: 181 NFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLG 236

BLAST of Csor.00g282980 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 301.6 bits (771), Expect = 5.9e-82
Identity = 154/241 (63.90%), Postives = 186/241 (77.18%), Query Frame = 0

Query: 16  MATLSIPFSQNGFSRRFFSA--KHPPVTAPFSHSLAPISCSA--NRNGAEPREILSPCKH 75
           MA+L + F++N  S  FFS   +  P       SL  + CS     NG   ++ L P K 
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLRREP------RSLVTVHCSGENRENGEGVKKSLFPLKE 60

Query: 76  IGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLR 135
           +GS+AC  L    LT  SP  AANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLR
Sbjct: 61  LGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLR 120

Query: 136 FCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVN 195
           FCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVN
Sbjct: 121 FCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVN 180

Query: 196 FGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGC 253
           FGK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGC
Sbjct: 181 FGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGC 235

BLAST of Csor.00g282980 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 298.1 bits (762), Expect = 6.5e-81
Identity = 155/250 (62.00%), Postives = 188/250 (75.20%), Query Frame = 0

Query: 16  MATLSIPFSQNGFSRRFFSA--KHPPVTAPFSHSLAPI----------SCSANR-NGAEP 75
           MA+L + F++N  S  FFS   +  P +    H  A +          S   NR NG   
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLRREPRSLVTVHCSAKVVYVILICIMFSAGENRENGEGV 60

Query: 76  REILSPCKHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANG 135
           ++ L P K +GS+AC  L    LT  SP  AANQRLPPLSTEP+RCE+AFVGNTIGQANG
Sbjct: 61  KKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANG 120

Query: 136 VYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDF 195
           VYDKP+DLRFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F
Sbjct: 121 VYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNF 180

Query: 196 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTIS 253
           +NAV+DRVNFGK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+
Sbjct: 181 TNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESIN 240

BLAST of Csor.00g282980 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 47/157 (29.94%), Postives = 72/157 (45.86%), Query Frame = 0

Query: 100 PLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDG 159
           P   E NR E A      G  +       DL    ++NE    +  +  +A M E+ F G
Sbjct: 87  PAMAELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSADMRESDFSG 146

Query: 160 ADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQD 219
           +  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S    A+++ 
Sbjct: 147 STFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEG 206

Query: 220 AVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 252
           A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 207 ADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

BLAST of Csor.00g282980 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 47/157 (29.94%), Postives = 72/157 (45.86%), Query Frame = 0

Query: 100 PLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKRQLKGKSLAAALMSEAKFDG 159
           P   E NR E A      G  +       DL    ++NE    +  +  +A M E+ F G
Sbjct: 13  PAMAELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSADMRESDFSG 72

Query: 160 ADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQD 219
           +  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S    A+++ 
Sbjct: 73  STFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEG 132

Query: 220 AVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 252
           A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 133 ADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P817603.7e-8164.05Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
Q8H1Q12.0e-1029.94Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
B1WVN54.7e-0729.41Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ... [more]
P742217.5e-0531.63Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ... [more]
P817782.2e-0486.96Thylakoid lumenal 17.4 kDa protein (Fragment) OS=Spinacia oleracea OX=3562 PE=1 ... [more]
Match NameE-valueIdentityDescription
KAG6576642.15.84e-181100.00Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosper... [more]
XP_022984509.12.49e-17296.41thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima][more]
XP_022923067.14.09e-17296.02thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita moschata][more]
XP_023553432.11.70e-16598.31thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pe... [more]
XP_008455988.13.62e-15190.30PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1JAQ71.20e-17296.41thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36... [more]
A0A6J1E5481.98e-17296.02thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=... [more]
A0A1S3C2V71.75e-15190.30thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A6J1G0I92.78e-14888.19thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ... [more]
A0A0A0LC741.61e-14787.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G53490.12.7e-8264.05Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G53490.25.9e-8263.90Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G53490.36.5e-8162.00Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12250.11.4e-1129.94Pentapeptide repeat-containing protein [more]
AT1G12250.21.4e-1129.94Pentapeptide repeat-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001646Pentapeptide repeatPFAMPF13599Pentapeptide_4coord: 175..233
e-value: 9.9E-8
score: 32.1
NoneNo IPR availableGENE3D2.160.20.80coord: 128..252
e-value: 1.3E-21
score: 78.2
NoneNo IPR availablePANTHERPTHR47485:SF1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 16..252
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 130..234
IPR044195Pentapeptide repeat containing protein TL17-likePANTHERPTHR47485THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 16..252

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g282980.m01Csor.00g282980.m01mRNA