Csor.00g281680 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g281680
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ethylene-responsive transcription factor RAP2-11-like
Location	Csor_Chr03: 3262296 .. 3265589 (-)
RNA-Seq Expression	Csor.00g281680
Synteny	Csor.00g281680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTAACTTCCAGTCGCCGGAGACCCACGGCGGAGCCGCTGTACCAGTGGTCAAAACAAGCAAATTCAAAGGCAAAACCAGAGGAAACAACGGCAACAAGTTCGTCGGAGTCCGGCAGCGGCCGTCGGGCAGATGGGTGGCGGAAATCAAAGACACGACAAAGAAAATCCGAATGTGGTTAGGAACATTCGAGACCGCCGAGGAAGCCGCTCGTGCCTACGATGAAGCCGCCTGTCTTCTCCGAGGTTCGAACACAAGAACTAATTTCTTCATCCCACAAATCCCCACTAATTCCCCAATCGCCTCTCGAATCCGCACCCTTTTAAACAGCAAAAAGCCCCTGGGAAATTCCTCCGCCGCCGCCTCCGCCGCCGTCCCTGCTCCAACAATTCAGGACGGTCGGATGATCGACGTGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTGGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGCACAGTTTTGCATAAACTTGATATGGTATCAGAGCAGAAATAAGATCCACGAGATCCATAGCCTCTGCTGTTAGACATGTCAATCCCAAACAACACAATGTCTTCTCCGTCGATCAGTCAGGTGATTAGTGTTAAGCTTACACAAGAAAATTATCTACTGTGGTCTACCCAAATCCTTCCCTACTTGCGTAGCCAAAACCTTGTTGGTTTTGTGGATGGATCCATGCCTGCACCAAGCCAGACGATCGCCGTTGAACCAAGTGAAGAAACAGGGAATCGCAAAATTATCATCAACCCTGAGTTCACAGTCTGGTACCCCCAGGACCAGCTGGTACTCAGCCTCATCAACTCATCAGTCACTGAGGAGGTTCTCAGCACGATGGTTGGAATCACCACTGCACGAGAAGCCTGGATTACGCTGGAGCGACAATTTGCTTCCACATCTCGAGCAAGAGCAATGCAGATCCGTATGGAACTCTCTACTATCCAGAAAAAGGACATGACAATTGCTGACTACTTTCGTAAAGTAAAACATCTTGGTGATACACTTGCTGCCATTGGCAAGCGAATAGAGGATGAAGAACTCATCGCCTACATGCTGCAAGGACTTGGTCCAGATTATGATCCTCTAGTCACAAGCATTACAACCAGAACAGATGTATACACTGTCAGCGACGTGTATGCTCACATGCTGAGCTATGAGATGCGGCACTTGCGTAAGGGTACATTTGAGCAACTTTCATCTGCTAACAATGTCAATAGGATATCCATTCGTGGAGGTGCCAATGGAGGTCGAGGTAGTCGCGGTCGTAGTCGTCAGTTAAATAGTGGTCATGGACAATCAAGGCGTACCGTGAACAATCCTGGACGTCAACCATCAAAGACACAAAGCAGCTCAGGCATTGTCTGTCAGATTTGTGGTAAGCCCAATCACGATGCTTTGCAATGCTGGCACAGATTTGATCAGGCATATCAAGCCGAAAATAATCTCAAACAAGCAGCTTTGGCAACAAGTGGATACACTAGTGACACAAACTGGTATGTTGACACTGGAGCCACAGATCATATCACCAATGACCTAGAGAGGCTTACCACCAGAGAACGCTACACTGGCACCGACCAAATTCAGGTTGCAAATGGCGCAGGTTTGTCTATCTCTCATATTGGGAATTCATTAATTTCTGGTTCATCTCTTGTTCTGAAACATATCCTATATGTTCCTAAAATCAATAAGCACCTAATTTCAGTACAAAGACTAGCATCTGATAATAATGCTGTTGTAGAATTTCACCCAAACTATTTTTTGGTTAAGGACCGAGTCACGAAGAAACTCCTGCTCCACGGTAGATGTAAGAATGGCCTATACGTTCTACCGCATAATTTCAGTCAAGCCTTGCTGACAGCCAAACTTTCGAAAGAACAATGGCACAGAAGGCTAGGGCACCCTGCATCTCCAATTACCATTAGAATTCTACAAGATAATAATTTAGCTATAGATACTAATATTCCCTCTTCCTCAATTTGTAATGCTTGTCAATTAGGGAAAGCACATCAGTTGCCATTTGGTTCTTCTCAGCATGTATCTACAGCACCCCTTCAATTAATTCACACTGATGTATGGGGTCCATCCATTGCGTCAGTAAATAATTCCAAATATTATGTTTCCTTTGTTGATGATTTTAGTCGTTATGTTTGGATTTACTTTCTGAGATGCAAATCTGATGTTGAGTCTGTGTTCCTTCAATTTCAAAAACATGTTGAAACTATGCTAAATACCAAAATTCGCTCCGTCCAATCAGATTGGGGGGGTGAATACCATCGGTTACACAATTATTTCAAATCCACAGGCATTGAACATCATATCTCCTGTCCTCACACACACCAGCAGAATGGGTTAGTCGAAAGAAAACACAGACACATTGTAGAAACTGGCCTTGCTTTACTCGCTCAAGCCAACATGCCTCTATCCTACTGGGATGAAGCTTTCAACACAGCTTGCTTTCTTATAAATAGAATGCCCAGCCGAACCATACAACAAGACACACCACTTCATAAATTGTTTGGTAAAAGTCCAGACTACTCCATGCTTAGGGTGTTTGGCTGTGCTTGCTGGCCTAATTTAAGGCCTTACAACAACAAGAAACTGAGTTTCAGAACTACTAGATGTATATTCTTGGGTTATAGTTCTTCTCATAAGGGATATAAATGCTTAAATAGAAGTACAGGACGTATTTACATCTCTAGAGACGTGGTTTTCGATGAAAATATTTTTCCTTTTGAAGAATCTAAGCCACCAAACAAAACCACAAATCCACATCATCCTGTTCTACTTCCAGCCTTAGCCAAACTTGCTAGTTTTTACACTGAAAATGCTCTTACAGATATTGAACCAGTTGTTAGTAATTCCCATATGAATGATGGTCAAACTGATAATATTGCTAGTGACAACTTGTCTGGTGTCAGCTTATCTTCTGCAGATAATACAAGAAGTTCAGAGGAAATTGCAGAATATGAAGCTGAGAGCAGTTCGATCAATGCTCAAAACCAAACTCATGAACATGTGTCTGATCAACCAACTGAAGCAGCTAGTCAACATCCAATGCGAACAAGGTTGAGAAATAACATTGTACAAGCTAAACAATTCACTGATGGAACTATCAGATATTCAGAAACCTCAAGAAAATTCGCAAGCGCTGTAACTATCACAACTCCGATCATAGAGACTGCTACTGA

mRNA sequence

ATGGAAATTAACTTCCAGTCGCCGGAGACCCACGGCGGAGCCGCTGTACCAGTGGTCAAAACAAGCAAATTCAAAGGCAAAACCAGAGGAAACAACGGCAACAAGTTCGTCGGAGTCCGGCAGCGGCCGTCGGGCAGATGGGTGGCGGAAATCAAAGACACGACAAAGAAAATCCGAATGTGGTTAGGAACATTCGAGACCGCCGAGGAAGCCGCTCGTGCCTACGATGAAGCCGCCTGTCTTCTCCGAGGTTCGAACACAAGAACTAATTTCTTCATCCCACAAATCCCCACTAATTCCCCAATCGCCTCTCGAATCCGCACCCTTTTAAACAGCAAAAAGCCCCTGGGAAATTCCTCCGCCGCCGCCTCCGCCGCCGTCCCTGCTCCAACAATTCAGGACGGTCGGATGATCGACGTAGCAGAAATAAGATCCACGAGATCCATAGCCTCTGCTGTTAGACATGTCAATCCCAAACAACACAATGTCTTCTCCGTCGATCAGTCAGATGTATACACTGTCAGCGACGTGTATGCTCACATGCTGAGCTATGAGATGCGGCACTTGCGTAAGGGTACATTTGAGCAACTTTCATCTGCTAACAATGTCAATAGGATATCCATTCGTGGAGGTGCCAATGGAGGTCGAGGTAGTCGCGGTCGTAGTCGTCAGTTAAATAGTGGTCATGGACAATCAAGGCGTACCGTGAACAATCCTGGACGTCAACCATCAAAGACACAAAGCAGCTCAGGCATTGTCTGTCAGATTTGTGATATTGAACCAGTTGTTAGTAATTCCCATATGAATGATGGTCAAACTGATAATATTGCTAGTGACAACTTGTCTGGTGTCAGCTTATCTTCTGCAGATAATACAAGAAGTTCAGAGGAAATTGCAGAATATGAAGCTGAGAGCAGTTCGATCAATGCTCAAAACCAAACTCATGAACATGTGTCTGATCAACCAACTGAAGCAGCTAGTCAACATCCAATGCGAACAAGAAACCTCAAGAAAATTCGCAAGCGCTGTAACTATCACAACTCCGATCATAGAGACTGCTACTGA

Coding sequence (CDS)

ATGGAAATTAACTTCCAGTCGCCGGAGACCCACGGCGGAGCCGCTGTACCAGTGGTCAAAACAAGCAAATTCAAAGGCAAAACCAGAGGAAACAACGGCAACAAGTTCGTCGGAGTCCGGCAGCGGCCGTCGGGCAGATGGGTGGCGGAAATCAAAGACACGACAAAGAAAATCCGAATGTGGTTAGGAACATTCGAGACCGCCGAGGAAGCCGCTCGTGCCTACGATGAAGCCGCCTGTCTTCTCCGAGGTTCGAACACAAGAACTAATTTCTTCATCCCACAAATCCCCACTAATTCCCCAATCGCCTCTCGAATCCGCACCCTTTTAAACAGCAAAAAGCCCCTGGGAAATTCCTCCGCCGCCGCCTCCGCCGCCGTCCCTGCTCCAACAATTCAGGACGGTCGGATGATCGACGTAGCAGAAATAAGATCCACGAGATCCATAGCCTCTGCTGTTAGACATGTCAATCCCAAACAACACAATGTCTTCTCCGTCGATCAGTCAGATGTATACACTGTCAGCGACGTGTATGCTCACATGCTGAGCTATGAGATGCGGCACTTGCGTAAGGGTACATTTGAGCAACTTTCATCTGCTAACAATGTCAATAGGATATCCATTCGTGGAGGTGCCAATGGAGGTCGAGGTAGTCGCGGTCGTAGTCGTCAGTTAAATAGTGGTCATGGACAATCAAGGCGTACCGTGAACAATCCTGGACGTCAACCATCAAAGACACAAAGCAGCTCAGGCATTGTCTGTCAGATTTGTGATATTGAACCAGTTGTTAGTAATTCCCATATGAATGATGGTCAAACTGATAATATTGCTAGTGACAACTTGTCTGGTGTCAGCTTATCTTCTGCAGATAATACAAGAAGTTCAGAGGAAATTGCAGAATATGAAGCTGAGAGCAGTTCGATCAATGCTCAAAACCAAACTCATGAACATGTGTCTGATCAACCAACTGAAGCAGCTAGTCAACATCCAATGCGAACAAGAAACCTCAAGAAAATTCGCAAGCGCTGTAACTATCACAACTCCGATCATAGAGACTGCTACTGA

Protein sequence

MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSSAAASAAVPAPTIQDGRMIDVAEIRSTRSIASAVRHVNPKQHNVFSVDQSDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRNLKKIRKRCNYHNSDHRDCY

Homology

[Close]

BLAST of Csor.00g281680 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.5e-38
Identity = 98/168 (58.33%), Postives = 111/168 (66.07%), Query Frame = 0


Query: 1   MEINFQSP--ETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQ P  + H  A     K  KFKG+ R +N NKFVGVRQRPSGRWVAEIKDTT+KI
Sbjct: 1   MEIQFQQPNLQQHQKAG---TKGGKFKGRNRNSNTNKFVGVRQRPSGRWVAEIKDTTQKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGN 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTN FI  +  +SP+ASRIR LLN+KK  GN
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTN-FITHVSLDSPLASRIRNLLNNKK--GN 120

Query: 121 SSAAASAAVPAPTIQDGRMIDV-AEIRSTRSIASAVRHVNPKQHNVFS 166
                        +  G  +DV A   ST S +S   + +   HN  S
Sbjct: 121 KKQEG-------VVDVGVDVDVPAPSASTTSTSSNTSNSDKNDHNSLS 155

[Close]

BLAST of Csor.00g281680 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.1e-37
Identity = 88/132 (66.67%), Postives = 98/132 (74.24%), Query Frame = 0


Query: 1   MEINFQSPETHG-GAAVPVV-KTSKFKGKTR-GNNGNKFVGVRQRPSGRWVAEIKDTTKK 60
           MEI FQ P      A + V  K  KFKG+ R  NN NKFVGVRQRPSGRWVAEIKDTT+K
Sbjct: 1   MEIQFQQPNMQNQKAGISVTNKGGKFKGRNRNSNNTNKFVGVRQRPSGRWVAEIKDTTQK 60

Query: 61  IRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLG 120
           IRMWLGTFETAEEAARAYDEAACLLRGSNTRTN FI  +  +SP+ASRIR LLN++K   
Sbjct: 61  IRMWLGTFETAEEAARAYDEAACLLRGSNTRTN-FITHVSLDSPLASRIRNLLNNRKGDK 120

Query: 121 NSSAAASAAVPA 130
                A A+ P+
Sbjct: 121 KQEDGAVASAPS 131

[Close]

BLAST of Csor.00g281680 vs. ExPASy Swiss-Prot
Match: A9Y0K8 (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 4.2e-30
Identity = 80/143 (55.94%), Postives = 96/143 (67.13%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKT-RGNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI F  P+     ++   K +KFKG+  +    +KFVGVRQRPSGR+VAEIKDTT+ IR
Sbjct: 1   MEIQFDEPK----KSLRPKKVNKFKGRNKKSETRDKFVGVRQRPSGRYVAEIKDTTQNIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKP---- 120
           MWLGTFETAEEAARAYDEAA LLRGS TRTN F+  +  +SP+ASRIR LLN++K     
Sbjct: 61  MWLGTFETAEEAARAYDEAATLLRGSKTRTN-FVTHVSYDSPLASRIRHLLNNRKKGTKQ 120

Query: 121 ---LGNSSAAASAAVPAPTIQDG 136
               G SS  + A     T  DG
Sbjct: 121 QDMNGISSTTSHADTTNDTTSDG 138

[Close]

BLAST of Csor.00g281680 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.7e-29
Identity = 77/147 (52.38%), Postives = 95/147 (64.63%), Query Frame = 0


Query: 23  KFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLL 82
           K K K++GN   KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACLL
Sbjct: 10  KTKEKSKGNK-TKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLL 69

Query: 83  RGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSSAAASAAVPAPTIQDGRMIDVAE 142
           RGSNTRTN F    P NS ++ +IR LL+ K+ +          V + T  +   I  A 
Sbjct: 70  RGSNTRTN-FANHFPNNSQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYISTAT 129

Query: 143 IRSTRSIASAVRHVNPKQHNVFSVDQS 170
             +T +  +    +    +NV+  D S
Sbjct: 130 SLTTTTTTTTTTAI--PLNNVYRPDSS 152

[Close]

BLAST of Csor.00g281680 vs. ExPASy Swiss-Prot
Match: A9Y0K9 (Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=ERN3 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-25
Identity = 66/119 (55.46%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 22  SKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACL 81
           +K   K    N +KFVGVRQR SG+W AEIKDT+K IRMWLGT++TAEEAARAYDEAA L
Sbjct: 11  NKHGEKLMMKNRSKFVGVRQRASGKWAAEIKDTSKNIRMWLGTYKTAEEAARAYDEAAFL 70

Query: 82  LRGSNTRTNFFIP-QIPTNSPIASRIRTLLNSKKPLGNSSAAASAAVPAPTIQDGRMID 140
           LRG+NTRTNF     IPTNSPI+ +++ LL+ +K + N S + +      +   G  ID
Sbjct: 71  LRGTNTRTNFSTTHSIPTNSPISLKLKNLLH-RKSISNLSQSKNQCTLMSSSLQGAPID 128

[Close]

BLAST of Csor.00g281680 vs. NCBI nr
Match: KAG6603431.1 (Ethylene-responsive transcription factor ERN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 680 bits (1755), Expect = 2.84e-246
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSS 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSS
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSS 120

Query: 121 AAASAAVPAPTIQDGRMIDVAEIRSTRSIASAVRHVNPKQHNVFSVDQSDVYTVSDVYAH 180
           AAASAAVPAPTIQDGRMIDVAEIRSTRSIASAVRHVNPKQHNVFSVDQSDVYTVSDVYAH
Sbjct: 121 AAASAAVPAPTIQDGRMIDVAEIRSTRSIASAVRHVNPKQHNVFSVDQSDVYTVSDVYAH 180

Query: 181 MLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNPG 240
           MLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNPG
Sbjct: 181 MLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNPG 240

Query: 241 RQPSKTQSSSGIVCQICDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSSEEIAE 300
           RQPSKTQSSSGIVCQICDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSSEEIAE
Sbjct: 241 RQPSKTQSSSGIVCQICDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSSEEIAE 300

Query: 301 YEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRNLKKIRKRCNYHNSDHRDCY 354
           YEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRNLKKIRKRCNYHNSDHRDCY
Sbjct: 301 YEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRNLKKIRKRCNYHNSDHRDCY 354

[Close]

BLAST of Csor.00g281680 vs. NCBI nr
Match: XP_022950635.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata])

HSP 1 Score: 276 bits (707), Expect = 5.77e-89
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSS 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSS
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSS 120

Query: 121 AAASAAVPAPTIQDGRMID 139
           AAASAAVPAPTIQDGRMID
Sbjct: 121 AAASAAVPAPTIQDGRMID 139

[Close]

BLAST of Csor.00g281680 vs. NCBI nr
Match: KAG7033667.1 (Ethylene-responsive transcription factor RAP2-11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265 bits (677), Expect = 2.79e-84
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGN-S 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPL N +
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLDNPA 120

Query: 121 SAAASAAVPAPTIQDGRMID 139
           +AAASAAVPAPTIQDGRM D
Sbjct: 121 AAAASAAVPAPTIQDGRMYD 140

[Close]

BLAST of Csor.00g281680 vs. NCBI nr
Match: KAG6603485.1 (Ethylene-responsive transcription factor ERN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 262 bits (669), Expect = 3.95e-83
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEINFQSPETHGGAAVPVVKTSKFKGKT GNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTGGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGN-S 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPL N +
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLENPA 120

Query: 121 SAAASAAVPAPTIQDGRMID 139
           +AAASAAVPAPTIQDGRM D
Sbjct: 121 AAAASAAVPAPTIQDGRMYD 140

[Close]

BLAST of Csor.00g281680 vs. NCBI nr
Match: XP_023545037.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260 bits (664), Expect = 2.25e-82
Identity = 133/140 (95.00%), Postives = 135/140 (96.43%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTT+KIRM
Sbjct: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNS- 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQI TNSPIASRIRTLLNSKKPL N  
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENPP 120

Query: 121 SAAASAAVPAPTIQDGRMID 139
           +AAASAAVPAPTIQDGRM D
Sbjct: 121 AAAASAAVPAPTIQDGRMFD 140

[Close]

BLAST of Csor.00g281680 vs. ExPASy TrEMBL
Match: A0A6J1GGA9 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3662 GN=LOC111453675 PE=4 SV=1)

HSP 1 Score: 276 bits (707), Expect = 2.79e-89
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSS 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSS
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSS 120

Query: 121 AAASAAVPAPTIQDGRMID 139
           AAASAAVPAPTIQDGRMID
Sbjct: 121 AAASAAVPAPTIQDGRMID 139

[Close]

BLAST of Csor.00g281680 vs. ExPASy TrEMBL
Match: A0A6J1ISK7 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=3661 GN=LOC111478312 PE=4 SV=1)

HSP 1 Score: 259 bits (662), Expect = 2.12e-82
Identity = 130/139 (93.53%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEI+FQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSS 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQI TNSPIASRIRTLLNSKK L N +
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKSLENPA 120

Query: 121 AAASAAVPAPTIQDGRMID 139
           AA++AAVPAPTIQDGRM+D
Sbjct: 121 AASAAAVPAPTIQDGRMLD 139

[Close]

BLAST of Csor.00g281680 vs. ExPASy TrEMBL
Match: A0A6J1EE15 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3662 GN=LOC111432381 PE=4 SV=1)

HSP 1 Score: 214 bits (544), Expect = 3.94e-64
Identity = 115/144 (79.86%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEI+FQSP THGGA   + K+SKFKG+TRGNN NKFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKK-----P 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNF IPQI TNSPIASRIR+LLNS+K     P
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNF-IPQISTNSPIASRIRSLLNSRKNQILNP 120

Query: 121 LGNSSAAASAAVPAPTIQDGRMID 139
           L N  A   AAV AP IQDGR+ D
Sbjct: 121 LKNHPA---AAVAAPIIQDGRLFD 140

[Close]

BLAST of Csor.00g281680 vs. ExPASy TrEMBL
Match: A0A6J1HMY7 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=3661 GN=LOC111466085 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 2.12e-62
Identity = 112/147 (76.19%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEI+FQSP  HGGA   + K+SKFKG+TRG+N NKF+GVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPGIHGGATASLGKSSKFKGRTRGSNANKFLGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKK-----P 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNF IPQI TNSPIASRIR+LLN +K     P
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNF-IPQISTNSPIASRIRSLLNGRKNPILSP 120

Query: 121 LGN---SSAAASAAVPAPTIQDGRMID 139
           L N   ++AAA+AA  AP IQDGR+ D
Sbjct: 121 LRNHPPAAAAAAAAAAAPIIQDGRLFD 146

[Close]

BLAST of Csor.00g281680 vs. ExPASy TrEMBL
Match: A0A0A0L1B8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G192030 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 1.06e-57
Identity = 104/149 (69.80%), Postives = 121/149 (81.21%), Query Frame = 0


Query: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNN-GNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI+FQSPE H GA   ++K++KFKG+ R NN GNKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQIPTNSPIASRIRTLLNSKK----- 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNF IPQI TNSPIASRIR+LLN+KK     
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNF-IPQISTNSPIASRIRSLLNTKKTVNRK 120

Query: 121 ----PLGNSSAAASAAVPAPTIQDGRMID 139
               P  +++ +A +AV  P+I+D  + +
Sbjct: 121 PPEKPTTSAAVSAGSAVVDPSIKDDGLFE 148

[Close]

BLAST of Csor.00g281680 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 )

HSP 1 Score: 130.2 bits (326), Expect = 3.3e-30
Identity = 77/147 (52.38%), Postives = 95/147 (64.63%), Query Frame = 0


Query: 23  KFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLL 82
           K K K++GN   KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACLL
Sbjct: 10  KTKEKSKGNK-TKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLL 69

Query: 83  RGSNTRTNFFIPQIPTNSPIASRIRTLLNSKKPLGNSSAAASAAVPAPTIQDGRMIDVAE 142
           RGSNTRTN F    P NS ++ +IR LL+ K+ +          V + T  +   I  A 
Sbjct: 70  RGSNTRTN-FANHFPNNSQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYISTAT 129

Query: 143 IRSTRSIASAVRHVNPKQHNVFSVDQS 170
             +T +  +    +    +NV+  D S
Sbjct: 130 SLTTTTTTTTTTAI--PLNNVYRPDSS 152

[Close]

BLAST of Csor.00g281680 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-17
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 21  TSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAAC 80
           +SK K K     G +F+GVR+RP GR+ AEI+D T K R WLGTF+TAEEAA AYD AA 
Sbjct: 5   SSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAAR 64

Query: 81  LLRGSNTRTNFFIPQIPTNSPIAS 105
            +RG+  RTNF    +P +S + S
Sbjct: 65  SMRGTRARTNFVYSDMPPSSSVTS 88

[Close]

BLAST of Csor.00g281680 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 85.9 bits (211), Expect = 7.2e-17
Identity = 59/144 (40.97%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 17  PVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYD 76
           P VKT+    KT   NG ++ GVR+RP GR+ AEI+D  KK R+WLGTF+T EEAARAYD
Sbjct: 3   PTVKTAAV--KTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYD 62

Query: 77  EAACLLRGSNTRTNFFIPQIPTN----SPIASRIRTLLNSKKPLGNSSAAASAAVPAPTI 136
           + A   RG+  +TNF    I  +    +   S+  T+ +S   L   S + S+  P P I
Sbjct: 63  KRAIEFRGAKAKTNFPCYNINAHCLSLTQSLSQSSTVESSFPNLNLGSDSVSSRFPFPKI 122

Query: 137 QDGRMIDVAEIRSTRSIASAVRHV 157
           Q    + V + RS    +S V  V
Sbjct: 123 QVKAGMMVFDERSESDSSSVVMDV 144

[Close]

BLAST of Csor.00g281680 vs. TAIR 10
Match: AT4G23750.1 (cytokinin response factor 2 )

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-16
Identity = 55/160 (34.38%), Postives = 83/160 (51.88%), Query Frame = 0


Query: 35  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFFI- 94
           KF GVRQRP G+W AEI+D  K++R+WLGT+ TAEEAA  YD AA  LRG +  TNF + 
Sbjct: 121 KFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVT 180

Query: 95  ------PQIPTNSPIASRIRTLLNSKKPLGNSSAAASAA------VPAPTIQDGRMIDVA 154
                  + P  SP+  + +    SKK +  SS+ + ++       P   ++    +D  
Sbjct: 181 PTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAVDEF 240

Query: 155 EIRSTRSIASAVRHVNPKQHNV---FSVDQSDVYTVSDVY 179
              S+  +A+ V    P    V   FS   + +++  DV+
Sbjct: 241 SGISSSPVAAVVVKEEPSMTTVSETFSDFSAPLFSDDDVF 280

[Close]

BLAST of Csor.00g281680 vs. TAIR 10
Match: AT4G23750.2 (cytokinin response factor 2 )

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-16
Identity = 55/160 (34.38%), Postives = 83/160 (51.88%), Query Frame = 0


Query: 35  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFFI- 94
           KF GVRQRP G+W AEI+D  K++R+WLGT+ TAEEAA  YD AA  LRG +  TNF + 
Sbjct: 121 KFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVT 180

Query: 95  ------PQIPTNSPIASRIRTLLNSKKPLGNSSAAASAA------VPAPTIQDGRMIDVA 154
                  + P  SP+  + +    SKK +  SS+ + ++       P   ++    +D  
Sbjct: 181 PTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAVDEF 240

Query: 155 EIRSTRSIASAVRHVNPKQHNV---FSVDQSDVYTVSDVY 179
              S+  +A+ V    P    V   FS   + +++  DV+
Sbjct: 241 SGISSSPVAAVVVKEEPSMTTVSETFSDFSAPLFSDDDVF 280

The following BLAST results are available for this feature:

BLAST of Csor.00g281680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A1X9PY88	2.5e-38	58.33	Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN...	[more]
A2Q5W1	6.1e-37	66.67	Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=...	[more]
A9Y0K8	4.2e-30	55.94	Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=...	[more]
Q6J9S1	4.7e-29	52.38	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702...	[more]
A9Y0K9	1.8e-25	55.46	Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=...	[more]

BLAST of Csor.00g281680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603431.1	2.84e-246	100.00	Ethylene-responsive transcription factor ERN1, partial [Cucurbita argyrosperma s...	[more]
XP_022950635.1	5.77e-89	100.00	ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata]	[more]
KAG7033667.1	2.79e-84	96.43	Ethylene-responsive transcription factor RAP2-11, partial [Cucurbita argyrosperm...	[more]
KAG6603485.1	3.95e-83	95.71	Ethylene-responsive transcription factor ERN1, partial [Cucurbita argyrosperma s...	[more]
XP_023545037.1	2.25e-82	95.00	ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pep...	[more]

BLAST of Csor.00g281680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGA9	2.79e-89	100.00	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1ISK7	2.12e-82	93.53	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1EE15	3.94e-64	79.86	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1HMY7	2.12e-62	76.19	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=366...	[more]
A0A0A0L1B8	1.06e-57	69.80	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G192030 PE=...	[more]

BLAST of Csor.00g281680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19790.1	3.3e-30	52.38	related to AP2 11	[more]
AT5G13910.1	1.1e-17	53.57	Integrase-type DNA-binding superfamily protein	[more]
AT1G28370.1	7.2e-17	40.97	ERF domain protein 11	[more]
AT4G23750.1	3.6e-16	34.38	cytokinin response factor 2	[more]
AT4G23750.2	3.6e-16	34.38	cytokinin response factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 36..47 score: 52.27 coord: 58..74 score: 70.05
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 35..98 e-value: 1.9E-35 score: 133.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 35..84 e-value: 6.8E-14 score: 51.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 35..92 score: 19.651295
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 35..91 e-value: 2.00474E-32 score: 113.906
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 34..93 e-value: 5.1E-23 score: 83.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..251
None	No IPR available	PANTHER	PTHR31194:SF1	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2	coord: 19..321
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 19..321
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 35..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g281680.m01	Csor.00g281680.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity