Csor.00g281140 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g281140
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like
Location	Csor_Chr19: 10947240 .. 10949178 (-)
RNA-Seq Expression	Csor.00g281140
Synteny	Csor.00g281140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAATAATTTTGCGCTCTTTCTTCTCATTCTTCTGATTCTCGGCAGCAGCGCGGCGGAGTCCCGGCAGCCGTCCACCAGGGACCAAAGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCTTCTCTGCAATCCGCCCTCGACTGGGCCTGCGGCGCCGGCGGTGCCGACTGTTCACCAATCCAGCCCGGTGGCGCATGCTACGACGCATCCAATGTCCAGAATATGGCCTCCTTCGCCTTCAACGACTACTTCCGTAAGCACGGCATGACCGACGACAGTTGCTTCTTCCAAAACGCCGCGGCTATCACCTCCTTAAACCCTAGTCTGTTTCTTCACTCCGATCTCTCAGTTTCTTAGCCGAATCTGTTCTTTAATTCAAAACCTTTCCAGATCTGTAACTGAAATGCTATTTGAATTTGTGTTCTGATTTTGATCTCTCTTGTTTTCAGGCTACGGAAATTGCAGAATCCCAGCTAGGTAAATTTCATTGTTGATCTTTAAAACCTAGTAATCAAGAAAAATAATGTGGATCATGGTTGAAATCATCGGCCACCAATGATTCTGCAATTATTTTTCTTCTTTTTTTAGTTTTAATTGGATTTGATTTCTCATTTTATGGCGCAGTTCGTTGAGAAATGGGAACTTTTCAAGCCAGACACCATCGGTAGGGTTGGGGCCGAGTGAAGACATAAGCGGGTCGGGTCGGAAATCGGGCAGGTCACGGGTTTGGCCTATGGTAATCGGGTATTTGTTTTTTAGAATTGTGTTTCAATCTCAAATAGGAAGCTCTAGTTTTTGTATTTGAATTTTGATTTTTTATTAAGCAAATATTGGTTATTAGATGTCTCAAATTCTTATTTTATATGATTTTTTTAATGACTTGGGGCAAAAGAAAAAGATTTTCTGTATAAAGGGTTTATCAAAAGCTAAAATATAATTTTATAAATAATTTCATAATAAATAAAAATTAAGGTTAGTTGTCCTAATATTTATCTAATAGATCCATAAGGTTATTGTTATTGCTATTATTATTATAGTAAAAACAATAATGAAATAAAATAATCGGAGTTATTTGAAATGATTTGCCAAAGAAATTGAGAATAAAGATCACGTGACAGAATCAAAGGTCACATGGGGAGAAAGAGATGCTTATAAAAATAAATATAAAAGTTTATTAAATATGTACACTTTGTTGGAATGTTAACTTTTTATATTTAATCTCAACACAACAAATGGAAGGGAGAGATGTTAAAACTAGGATATTCTAGAAGTTTTTTCCCCTAGAACACATCTATAACCTTTAAAAGATTAAATTAAAAAGTTACCATAGAGTCAAAGCATATATTTGAAATTATTTGAAATTTGAAATAAACTTTTAGTGAGTTAGCTATGTGACTAATGCATATGCACAACCACCATGCAAAATCGTGAAGTTACTAAATTTTTAATGGATTAGCTACCGCTATGCTTAGTCCCCAACAAATATGTTACATACCCTACTTGTCAAGGGGATTAGCTATGTCGGGCCTAGTCCGCATCAACACGTGTGGGTTAGCCATGCCTTGCTTGTTAGCTATGCCCATCTTAGTCCCTGACACATCATCGACACATATATGTCATGCCATCGACGCATATATGTCATGCCGTGAAACCTCATATTTCACAAGGTCAACAATGAAATTTATGGAAAACAAAATAAAATTGCAACAATTTGTGTTGCAATATTTTATTTAAATAACCAAATTGGGAGAAGAAGAAAAACCTCAAAGTGAAGCTTCGAACTAAGTATTGTAGGGCTTTACCCCGAAGGGAGCCCTTCCAGAAATTCTCGAAGGCCTGGGCCAAACCCAGGCCTAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAATTGACGCGCCTCGGTTAGAACCTCACTAG

mRNA sequence

ATGGCCAATAATTTTGCGCTCTTTCTTCTCATTCTTCTGATTCTCGGCAGCAGCGCGGCGGAGTCCCGGCAGCCGTCCACCAGGGACCAAAGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCTTCTCTGCAATCCGCCCTCGACTGGGCCTGCGGCGCCGGCGGTGCCGACTGTTCACCAATCCAGCCCGGTGGCGCATGCTACGACGCATCCAATGTCCAGAATATGGCCTCCTTCGCCTTCAACGACTACTTCCGTAAGCACGGCATGACCGACGACAGTTGCTTCTTCCAAAACGCCGCGGCTATCACCTCCTTAAACCCTAGCTACGGAAATTGCAGAATCCCAGCTAGTTCGTTGAGAAATGGGAACTTTTCAAGCCAGACACCATCGGTAGGGTTGGGGCCGAGTGAAGACATAAGCGGGTCGGGTCGGAAATCGGGCAGGGCTTTACCCCGAAGGGAGCCCTTCCAGAAATTCTCGAAGGCCTGGGCCAAACCCAGGCCTAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAATTGACGCGCCTCGGTTAGAACCTCACTAG

Coding sequence (CDS)

ATGGCCAATAATTTTGCGCTCTTTCTTCTCATTCTTCTGATTCTCGGCAGCAGCGCGGCGGAGTCCCGGCAGCCGTCCACCAGGGACCAAAGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCTTCTCTGCAATCCGCCCTCGACTGGGCCTGCGGCGCCGGCGGTGCCGACTGTTCACCAATCCAGCCCGGTGGCGCATGCTACGACGCATCCAATGTCCAGAATATGGCCTCCTTCGCCTTCAACGACTACTTCCGTAAGCACGGCATGACCGACGACAGTTGCTTCTTCCAAAACGCCGCGGCTATCACCTCCTTAAACCCTAGCTACGGAAATTGCAGAATCCCAGCTAGTTCGTTGAGAAATGGGAACTTTTCAAGCCAGACACCATCGGTAGGGTTGGGGCCGAGTGAAGACATAAGCGGGTCGGGTCGGAAATCGGGCAGGGCTTTACCCCGAAGGGAGCCCTTCCAGAAATTCTCGAAGGCCTGGGCCAAACCCAGGCCTAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAATTGACGCGCCTCGGTTAGAACCTCACTAG

Protein sequence

MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCRIPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRALPRREPFQKFSKAWAKPRPKRGFGNSFQPAIDAPRLEPH

Homology

[Close]

BLAST of Csor.00g281140 vs. ExPASy Swiss-Prot
Match: Q9M2K6 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 2.7e-31
Identity = 74/145 (51.03%), Postives = 96/145 (66.21%), Query Frame = 0


Query: 10  LILLILGSSAAESRQPSTRDQSG---ATELWCVAKNNADDASLQSALDWACGAGGADCSP 69
           L L IL ++AA     +T    G     ELWCVAKNNA+D+SLQ+A++WACG GGADC P
Sbjct: 11  LRLSILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGP 70

Query: 70  IQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCRIPASSL 129
           IQ GG C D ++VQ MASF FN+Y+ K+G  D++C F N AA+TSLNPS G C+ P+S  
Sbjct: 71  IQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPSSKG 130

Query: 130 RNGNFSSQTPSVGLGPSEDISGSGR 152
            N    +   S+G G + D+S  GR
Sbjct: 131 ANNGRLADDTSMGAGQA-DMSRGGR 154

[Close]

BLAST of Csor.00g281140 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 99.8 bits (247), Expect = 3.7e-20
Identity = 44/90 (48.89%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 35  ELWCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKH 94
           + +C+A +  D  +LQ+ALDWACG G ++CS IQPG +CY  +NV+  ASFAFN Y++K 
Sbjct: 379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKE 438

Query: 95  GMTDDSCFFQNAAAITSLNPSYGNCRIPAS 125
           G    SC F+  A IT+ +PS+G+C  P S
Sbjct: 439 GRASGSCDFKGVAMITTTDPSHGSCIFPGS 468

[Close]

BLAST of Csor.00g281140 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 7.0e-19
Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 15  LGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACY 74
           L  S++ S+ PS +  S     WCV K  A +  LQ++LDWACG  G DC  IQPGGAC+
Sbjct: 345 LAKSSSSSQTPSGKVTSSG---WCVPKKGATNEELQASLDWACG-HGIDCGAIQPGGACF 404

Query: 75  DASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCRIP 123
           + +NV + A++A N YF+K       C F   A +TS NPSY NC  P
Sbjct: 405 EPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYP 448

[Close]

BLAST of Csor.00g281140 vs. ExPASy Swiss-Prot
Match: Q94CD8 (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.9e-18
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 34  TELWCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRK 93
           + ++CVAK +ADD  L   L+WACG G A+C+ IQPG  CY  ++V++ ASFAFNDY++K
Sbjct: 359 SSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQK 418

Query: 94  HGMTDDSCFFQNAAAITSLNPSYGNCRIPAS---SLRNGNFSSQTPSVGLGPSEDISGS 150
                 +C F   A  T+ +PSY  C    S   +  NGNF    P   LGP+  + G+
Sbjct: 419 MKSAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANATNGNF----PPDALGPASPLGGN 473

[Close]

BLAST of Csor.00g281140 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 32  GATELWCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYF 91
           G T+ WC+A + A    LQ+ALDWACG G  DCS +QP   C++   V + AS+AFN Y+
Sbjct: 386 GGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYY 445

Query: 92  RKHGMTDDSCFFQNAAAITSLNPSYGNC 120
           ++ G +   C F  A+     +PSYGNC
Sbjct: 446 QQSGASSIDCSFNGASVEVDKDPSYGNC 473

[Close]

BLAST of Csor.00g281140 vs. NCBI nr
Match: KAG6572411.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391 bits (1005), Expect = 2.83e-137
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRALPRREPFQKFSKAWAKPRPKRGFG 180
           IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRALPRREPFQKFSKAWAKPRPKRGFG
Sbjct: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRALPRREPFQKFSKAWAKPRPKRGFG 180

Query: 181 NSFQPAIDAPRLEPH 195
           NSFQPAIDAPRLEPH
Sbjct: 181 NSFQPAIDAPRLEPH 195

[Close]

BLAST of Csor.00g281140 vs. NCBI nr
Match: XP_023554742.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310 bits (795), Expect = 1.91e-105
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRA 156
           IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGR+
Sbjct: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRS 156

[Close]

BLAST of Csor.00g281140 vs. NCBI nr
Match: XP_022952645.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata])

HSP 1 Score: 310 bits (795), Expect = 1.91e-105
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRA 156
           IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGR+
Sbjct: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRS 156

[Close]

BLAST of Csor.00g281140 vs. NCBI nr
Match: XP_023554741.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310 bits (795), Expect = 2.36e-105
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRA 156
           IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGR+
Sbjct: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRS 156

[Close]

BLAST of Csor.00g281140 vs. NCBI nr
Match: XP_022969385.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita maxima])

HSP 1 Score: 303 bits (777), Expect = 1.06e-102
Identity = 151/156 (96.79%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTR+QSGAT+LWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYG+CR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120

Query: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRA 156
           IPASSLRNGNF SQTPSVGLGPSEDISGSGRKSGR+
Sbjct: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRS 156

[Close]

BLAST of Csor.00g281140 vs. ExPASy TrEMBL
Match: A0A6J1GMC7 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455276 PE=4 SV=1)

HSP 1 Score: 310 bits (795), Expect = 9.26e-106
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRA 156
           IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGR+
Sbjct: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRS 156

[Close]

BLAST of Csor.00g281140 vs. ExPASy TrEMBL
Match: A0A6J1HZS5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita maxima OX=3661 GN=LOC111468407 PE=4 SV=1)

HSP 1 Score: 303 bits (777), Expect = 5.12e-103
Identity = 151/156 (96.79%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTR+QSGAT+LWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYG+CR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120

Query: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRA 156
           IPASSLRNGNF SQTPSVGLGPSEDISGSGRKSGR+
Sbjct: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRS 156

[Close]

BLAST of Csor.00g281140 vs. ExPASy TrEMBL
Match: A0A6J1JLF2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486269 PE=4 SV=1)

HSP 1 Score: 261 bits (666), Expect = 2.38e-86
Identity = 131/155 (84.52%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60
           M  NFALFLLI+ IL  SAAE + PS + Q GATELWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MPINFALFLLIVPIL-CSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120
           GADCSPIQP GACYDASNVQNMASFAFNDYF KHGMTDDSCFFQN+AA+TSLNPSYGNCR
Sbjct: 61  GADCSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAVTSLNPSYGNCR 120

Query: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGR 155
            P+SSLRNGNFSSQ+ SVGLGPSED+SGSGR+S R
Sbjct: 121 FPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRRSSR 154

[Close]

BLAST of Csor.00g281140 vs. ExPASy TrEMBL
Match: A0A6J1JNE0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486269 PE=4 SV=1)

HSP 1 Score: 261 bits (666), Expect = 2.92e-86
Identity = 131/155 (84.52%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60
           M  NFALFLLI+ IL  SAAE + PS + Q GATELWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MPINFALFLLIVPIL-CSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120
           GADCSPIQP GACYDASNVQNMASFAFNDYF KHGMTDDSCFFQN+AA+TSLNPSYGNCR
Sbjct: 61  GADCSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAVTSLNPSYGNCR 120

Query: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGR 155
            P+SSLRNGNFSSQ+ SVGLGPSED+SGSGR+S R
Sbjct: 121 FPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRRSSR 154

[Close]

BLAST of Csor.00g281140 vs. ExPASy TrEMBL
Match: A0A6J1ERW0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111437228 PE=4 SV=1)

HSP 1 Score: 256 bits (654), Expect = 1.60e-84
Identity = 129/155 (83.23%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60
           M  + ALFLLI LI+  SAAE + PS + Q GATELWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MEIDLALFLLIALII-CSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120
           G+DCSPIQP GACYDAS+VQ MASFAFNDYF KHGMTDDSCFFQN+AAITSLNPSYGNCR
Sbjct: 61  GSDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGR 155
            P+SSLRNGNFSSQ+ SVGLGPSED+SGSGRKSGR
Sbjct: 121 FPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGR 154

[Close]

BLAST of Csor.00g281140 vs. TAIR 10
Match: AT3G58100.1 (plasmodesmata callose-binding protein 5 )

HSP 1 Score: 136.7 bits (343), Expect = 2.0e-32
Identity = 74/145 (51.03%), Postives = 96/145 (66.21%), Query Frame = 0


Query: 10  LILLILGSSAAESRQPSTRDQSG---ATELWCVAKNNADDASLQSALDWACGAGGADCSP 69
           L L IL ++AA     +T    G     ELWCVAKNNA+D+SLQ+A++WACG GGADC P
Sbjct: 11  LRLSILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGP 70

Query: 70  IQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCRIPASSL 129
           IQ GG C D ++VQ MASF FN+Y+ K+G  D++C F N AA+TSLNPS G C+ P+S  
Sbjct: 71  IQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPSSKG 130

Query: 130 RNGNFSSQTPSVGLGPSEDISGSGR 152
            N    +   S+G G + D+S  GR
Sbjct: 131 ANNGRLADDTSMGAGQA-DMSRGGR 154

[Close]

BLAST of Csor.00g281140 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21
Identity = 62/140 (44.29%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 37  WCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGM 96
           WC+AK NA   SLQ ALD+ACG GGADC  IQ G ACY+ + +++ ASFAFN Y++KH  
Sbjct: 148 WCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQKH-P 207

Query: 97  TDDSCFFQNAAAITSLNPSYGNCRI----------PASSLRNGNFSSQT----PSVGLGP 156
             DSC F  AA +TS +PS G+C            P S +   +FSS      P     P
Sbjct: 208 GSDSCNFGGAAQLTSTDPSKGSCHFSSSSGTVSTSPPSQMSPPDFSSPPSSTYPPPITTP 267

Query: 157 SEDISGSGRKSGRALPRREP 163
           +  I+GSG   G A P   P
Sbjct: 268 TTGITGSGPPFGVAEPTGLP 286

[Close]

BLAST of Csor.00g281140 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21
Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 7   LFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAGGADCSP 66
           L  L+LL+  SSAA               +WCVA+ +    +LQ+ALD+AC A GADC+P
Sbjct: 46  LSFLLLLLFRSSAA---------------MWCVARFDVTSQALQAALDYAC-AAGADCAP 105

Query: 67  IQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCRIPASSL 126
           IQP G C+  + VQ  AS+AFN YF++  M   SC F   + I   +PSYG+C  P +S+
Sbjct: 106 IQPNGLCFLPNTVQAHASYAFNSYFQRAAMAPGSCNFAGTSTIAKTDPSYGSCVYP-NSV 165

Query: 127 RNGNFSSQTPSVGLGPSEDISGS 150
           RN   S+ T +VG  PS  +  S
Sbjct: 166 RNAGGSASTTTVGGTPSTTVGNS 171

[Close]

BLAST of Csor.00g281140 vs. TAIR 10
Match: AT1G11820.2 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.6e-21
Identity = 44/90 (48.89%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 35  ELWCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKH 94
           + +C+A +  D  +LQ+ALDWACG G ++CS IQPG +CY  +NV+  ASFAFN Y++K 
Sbjct: 379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKE 438

Query: 95  GMTDDSCFFQNAAAITSLNPSYGNCRIPAS 125
           G    SC F+  A IT+ +PS+G+C  P S
Sbjct: 439 GRASGSCDFKGVAMITTTDPSHGSCIFPGS 468

[Close]

BLAST of Csor.00g281140 vs. TAIR 10
Match: AT2G05790.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 99.0 bits (245), Expect = 4.5e-21
Identity = 44/86 (51.16%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 37  WCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGM 96
           WCVA  +A +  LQ  LD+ACG GGADC PIQPG  CY    ++  ASFAFN Y++K G 
Sbjct: 384 WCVANGDAGEERLQGGLDYACGEGGADCRPIQPGANCYSPDTLEAHASFAFNSYYQKKGR 443

Query: 97  TDDSCFFQNAAAITSLNPSYGNCRIP 123
              SC+F  AA + S  P YG C  P
Sbjct: 444 AGGSCYFGGAAYVVSQPPKYGRCEFP 469

The following BLAST results are available for this feature:

BLAST of Csor.00g281140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2K6	2.7e-31	51.03	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5...	[more]
O65399	3.7e-20	48.89	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ...	[more]
Q9M069	7.0e-19	45.37	Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 ...	[more]
Q94CD8	5.9e-18	42.02	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 ...	[more]
Q8VYE5	2.3e-17	44.32	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360...	[more]

BLAST of Csor.00g281140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572411.1	2.83e-137	100.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023554742.1	1.91e-105	99.36	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita pepo subsp. p...	[more]
XP_022952645.1	1.91e-105	99.36	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata]	[more]
XP_023554741.1	2.36e-105	99.36	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_022969385.1	1.06e-102	96.79	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita maxima]	[more]

BLAST of Csor.00g281140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMC7	9.26e-106	99.36	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1HZS5	5.12e-103	96.79	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1JLF2	2.38e-86	84.52	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 OS=Cucurbita maxima OX=3...	[more]
A0A6J1JNE0	2.92e-86	84.52	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1ERW0	1.60e-84	83.23	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X3 OS=Cucurbita moschata OX...	[more]

BLAST of Csor.00g281140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58100.1	2.0e-32	51.03	plasmodesmata callose-binding protein 5	[more]
AT1G29380.1	2.0e-21	44.29	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G13600.1	2.0e-21	41.96	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G11820.2	2.6e-21	48.89	O-Glycosyl hydrolases family 17 protein	[more]
AT2G05790.1	4.5e-21	51.16	O-Glycosyl hydrolases family 17 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 36..121 e-value: 3.6E-42 score: 156.1
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 36..107 e-value: 1.4E-19 score: 70.5
None	No IPR available	GENE3D	1.20.58.1040		coord: 31..133 e-value: 2.3E-11 score: 45.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..195
None	No IPR available	PANTHER	PTHR31044:SF79	BETA-1,3 GLUCANASE	coord: 28..136
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 28..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g281140.m01	Csor.00g281140.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma