Csor.00g280650 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g280650
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	CASP-like protein
Location	Csor_Chr19: 10687241 .. 10687896 (+)
RNA-Seq Expression	Csor.00g280650
Synteny	Csor.00g280650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAGCCCAAGAGAATTTGCTTGCTTCTATTAAGGCTTCTTGCTTTGGGCTCGACTCTTTCAGCTGCCATTGTTATGGCCGCAAGTCATGAAGAAGCCAGGTTTTTTAGCCTGTCTTTTGAAGCCAAATACACTCATACACCAGCCTTCAAGTGAGATTCCATCTCTTTTTCTTGTGTTCTTGGATTATGGGTCATTTTTTTCCTTTCTGAATCGAGTTTTTTTGTTGTTGTTCTTGAGGTACTTTGTGATTGCAAATGCTATTGCGAGTGTTTATGGGTTTTTCGTGCTGTTTCTTCCGGCGGAGAGCTTGCTCTGGCGATTAGTGCTCTGTTTCGATGCGGTAACTCTCAAAACAGGGGACCCTTTTCTTCTTCCACTCTGTTTCGATGGCTAATCTGACGCTATTTTTGAAGTAGATATTGACGATGCTGCTGACTTCGAGCATCGCGGCGGCGTTGGCGGTGGCGCAAATAGGAAAGAATGGGAATTCATACGCCGGATGGCTTCCAATATGCGACCAAGTGGCAAGTTATTGTAGGCAAGTCAGTGGAGCTCTGGCTTTAGGCCTCCTTGGACTCCTTGTTTACCTCTTGCTTCTTCTCTATTCTCTTCACTCTCTTTTGGACCCTCTTCTTTTGAAAAAGACTTAA

mRNA sequence

ATGGGCAAGCCCAAGAGAATTTGCTTGCTTCTATTAAGGCTTCTTGCTTTGGGCTCGACTCTTTCAGCTGCCATTGTTATGGCCGCAAGTCATGAAGAAGCCAGGTTTTTTAGCCTGTCTTTTGAAGCCAAATACACTCATACACCAGCCTTCAAGTACTTTGTGATTGCAAATGCTATTGCGAGTGTTTATGGGTTTTTCGTGCTGTTTCTTCCGGCGGAGAGCTTGCTCTGGCGATTAGTGCTCTGTTTCGATGCGATATTGACGATGCTGCTGACTTCGAGCATCGCGGCGGCGTTGGCGGTGGCGCAAATAGGAAAGAATGGGAATTCATACGCCGGATGGCTTCCAATATGCGACCAAGTGGCAAGTTATTGTAGGCAAGTCAGTGGAGCTCTGGCTTTAGGCCTCCTTGGACTCCTTGTTTACCTCTTGCTTCTTCTCTATTCTCTTCACTCTCTTTTGGACCCTCTTCTTTTGAAAAAGACTTAA

Coding sequence (CDS)

ATGGGCAAGCCCAAGAGAATTTGCTTGCTTCTATTAAGGCTTCTTGCTTTGGGCTCGACTCTTTCAGCTGCCATTGTTATGGCCGCAAGTCATGAAGAAGCCAGGTTTTTTAGCCTGTCTTTTGAAGCCAAATACACTCATACACCAGCCTTCAAGTACTTTGTGATTGCAAATGCTATTGCGAGTGTTTATGGGTTTTTCGTGCTGTTTCTTCCGGCGGAGAGCTTGCTCTGGCGATTAGTGCTCTGTTTCGATGCGATATTGACGATGCTGCTGACTTCGAGCATCGCGGCGGCGTTGGCGGTGGCGCAAATAGGAAAGAATGGGAATTCATACGCCGGATGGCTTCCAATATGCGACCAAGTGGCAAGTTATTGTAGGCAAGTCAGTGGAGCTCTGGCTTTAGGCCTCCTTGGACTCCTTGTTTACCTCTTGCTTCTTCTCTATTCTCTTCACTCTCTTTTGGACCCTCTTCTTTTGAAAAAGACTTAA

Protein sequence

MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAIASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT

Homology

[Close]

BLAST of Csor.00g280650 vs. ExPASy Swiss-Prot
Match: B9RW00 (CASP-like protein 1C1 OS=Ricinus communis OX=3988 GN=RCOM_1174750 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.9e-50
Identity = 105/163 (64.42%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           M K KR+  LLLRL+A G+ L AAIVMA SHE   FF++S+EAKY+ TPAFKYFVI NAI
Sbjct: 1   MAKAKRVFTLLLRLIAFGTALVAAIVMATSHESGSFFTVSYEAKYSDTPAFKYFVIVNAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
            +VY F  LFLP+ESLLWRLV+  D + TML+TSSI+AA+AVAQ+GK GNS+AGWLPIC 
Sbjct: 61  VTVYSFLALFLPSESLLWRLVIVTDVVFTMLVTSSISAAVAVAQVGKKGNSHAGWLPICG 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 164
           QV  +C QV+GALA   + L+ Y +LLLYS+H++L+PLLL+KT
Sbjct: 121 QVPKFCDQVTGALAAAFISLITYAILLLYSIHTVLNPLLLQKT 163

[Close]

BLAST of Csor.00g280650 vs. ExPASy Swiss-Prot
Match: B9N2D0 (CASP-like protein 1C2 OS=Populus trichocarpa OX=3694 GN=POPTR_0019s13170g PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.4e-50
Identity = 106/161 (65.84%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           M KPKR+  LLLRL+A+G+TL+A I+MA SHE+  FF++S+EAKYT TPAFKYFVIANAI
Sbjct: 1   MMKPKRLLSLLLRLIAVGATLAAVIIMATSHEKGTFFAVSYEAKYTDTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
            +VYGF VLF P  S LWRLVL  D + TMLL SSI+AALAVAQ+GKNGNS AGWLP+C 
Sbjct: 61  VTVYGFLVLFHPPGSPLWRLVLALDLVFTMLLISSISAALAVAQVGKNGNSRAGWLPVCG 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLK 162
           QV  YC QV+GAL  GL+ L+ Y++LLL+S+++ L+PLL K
Sbjct: 121 QVTKYCNQVTGALVAGLIALITYIILLLHSIYTFLNPLLEK 161

[Close]

BLAST of Csor.00g280650 vs. ExPASy Swiss-Prot
Match: B9N5U6 (CASP-like protein 1C3 OS=Populus trichocarpa OX=3694 GN=POPTR_0013s13520g PE=3 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 5.4e-49
Identity = 103/161 (63.98%), Postives = 129/161 (80.12%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           M KPKR+  LLLRL+A G+TL+A I+MA SHE+  FF+LS+EAKY+ TPAFKYFVIANAI
Sbjct: 1   MVKPKRLLSLLLRLIAFGATLAAVIIMATSHEKGSFFALSYEAKYSDTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
            +VYGF  LF+P+ES LWRLVL  D + TMLL SSI+AALAVAQ+GK GNS AGWLP+C 
Sbjct: 61  VTVYGFLALFIPSESPLWRLVLALDLVFTMLLISSISAALAVAQVGKKGNSSAGWLPVCG 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLK 162
           QV  YC QV+GAL  G + ++ Y++LLLYS+++ L+ LL K
Sbjct: 121 QVTKYCNQVTGALVAGFIAIITYIILLLYSIYTFLNSLLGK 161

[Close]

BLAST of Csor.00g280650 vs. ExPASy Swiss-Prot
Match: A7PJ32 (CASP-like protein 1C2 OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03760 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.6e-46
Identity = 95/148 (64.19%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 6   RICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAIASVYG 65
           RIC L+LRLLA G+TLSAAIVMA SHE   + SLS EAKY+HTPAFKYFVIANAI S Y 
Sbjct: 7   RICFLVLRLLAFGATLSAAIVMATSHERTTYLSLSIEAKYSHTPAFKYFVIANAIGSAYS 66

Query: 66  FFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVASY 125
             +LFLP+   LW LV+  D ++TM LTSSI+AAL++A +GK GNSYAGWLPICDQV +Y
Sbjct: 67  LLLLFLPSHGSLWPLVIASDVVITMFLTSSISAALSIAYVGKKGNSYAGWLPICDQVPNY 126

Query: 126 CRQVSGALALGLLGLLVYLLLLLYSLHS 154
           C  V+GALA G +G+++Y++LL YS+++
Sbjct: 127 CNHVTGALAAGFIGVVLYMVLLQYSIYT 154

[Close]

BLAST of Csor.00g280650 vs. ExPASy Swiss-Prot
Match: D7M2M8 (CASP-like protein 1C1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_327471 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.8e-45
Identity = 100/159 (62.89%), Postives = 125/159 (78.62%), Query Frame = 0


Query: 5   KRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAIASVY 64
           KRI  L+LRL A G+ L+A IVM  S E A FF++S EAKYT   AFKYFVIANA+ SVY
Sbjct: 6   KRIGGLVLRLAAFGAALAALIVMITSRERASFFAVSLEAKYTDMAAFKYFVIANAVVSVY 65

Query: 65  GFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVAS 124
            F VLFLP ESLLW+ V+  D ++TMLLTSS++AALAVAQ+GK GN+ AGWLPIC QV  
Sbjct: 66  SFLVLFLPKESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQVPK 125

Query: 125 YCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 164
           +C Q++GAL  G + L++Y+LLLLYSLHS++DP LL+K+
Sbjct: 126 FCDQITGALIAGFVALVLYVLLLLYSLHSVVDPFLLQKS 164

[Close]

BLAST of Csor.00g280650 vs. NCBI nr
Match: KAG6572362.1 (CASP-like protein 1C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011973.1 CASP-like protein 1C1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298 bits (763), Expect = 1.99e-101
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 163
           QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 163

[Close]

BLAST of Csor.00g280650 vs. NCBI nr
Match: XP_023554623.1 (LOW QUALITY PROTEIN: CASP-like protein 1C1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298 bits (763), Expect = 5.42e-101
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI
Sbjct: 30  MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 89

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 90  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 149

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 163
           QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT
Sbjct: 150 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 192

[Close]

BLAST of Csor.00g280650 vs. NCBI nr
Match: XP_022969278.1 (CASP-like protein 1C1 [Cucurbita maxima])

HSP 1 Score: 295 bits (755), Expect = 3.30e-100
Identity = 161/163 (98.77%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFFVLFLPAESLLWRLVLCFD ILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDVILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 163
           QVASYCRQVSGALALGLLGLLVY LLLLYSLHSLLDPLLLKKT
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYFLLLLYSLHSLLDPLLLKKT 163

[Close]

BLAST of Csor.00g280650 vs. NCBI nr
Match: XP_022952801.1 (CASP-like protein 1C1 [Cucurbita moschata])

HSP 1 Score: 293 bits (750), Expect = 1.91e-99
Identity = 160/163 (98.16%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGKPKRICLLLLRLLALGSTLSAA+VMAAS EEARFFSLSFEAKYTHTPAFKYFVIANAI
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAVVMAASREEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 163
           QVASYCRQVSGALALGLLGLLVY LLLLYSLHSLLDPLLLKKT
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYFLLLLYSLHSLLDPLLLKKT 163

[Close]

BLAST of Csor.00g280650 vs. NCBI nr
Match: XP_038888604.1 (CASP-like protein 1C1 [Benincasa hispida])

HSP 1 Score: 275 bits (703), Expect = 2.79e-92
Identity = 147/162 (90.74%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGK KRICLLLLRLLALGST+SAAIVMA SHEEARFF+LSFEAKYTHTP+FKYFVIANA+
Sbjct: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFALSFEAKYTHTPSFKYFVIANAV 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFD ++TMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFLVLFLPAESLLWRLVLCFDVMMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKK 162
           QVA+YC QV+GALA+GLLGL VYLLLLLYSLHSLLDPLLLKK
Sbjct: 121 QVANYCSQVTGALAMGLLGLFVYLLLLLYSLHSLLDPLLLKK 162

[Close]

BLAST of Csor.00g280650 vs. ExPASy TrEMBL
Match: A0A6J1I0I5 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111468331 PE=3 SV=1)

HSP 1 Score: 295 bits (755), Expect = 1.60e-100
Identity = 161/163 (98.77%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFFVLFLPAESLLWRLVLCFD ILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDVILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 163
           QVASYCRQVSGALALGLLGLLVY LLLLYSLHSLLDPLLLKKT
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYFLLLLYSLHSLLDPLLLKKT 163

[Close]

BLAST of Csor.00g280650 vs. ExPASy TrEMBL
Match: A0A6J1GL75 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455394 PE=3 SV=1)

HSP 1 Score: 293 bits (750), Expect = 9.24e-100
Identity = 160/163 (98.16%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGKPKRICLLLLRLLALGSTLSAA+VMAAS EEARFFSLSFEAKYTHTPAFKYFVIANAI
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAVVMAASREEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 163
           QVASYCRQVSGALALGLLGLLVY LLLLYSLHSLLDPLLLKKT
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYFLLLLYSLHSLLDPLLLKKT 163

[Close]

BLAST of Csor.00g280650 vs. ExPASy TrEMBL
Match: A0A1S3C0T2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103495515 PE=3 SV=1)

HSP 1 Score: 274 bits (700), Expect = 3.87e-92
Identity = 145/162 (89.51%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGK KRICLLLLRLLALGST+SAAIVMA SHEEARFF+LSFEAKYTHTP+FKYFVIAN++
Sbjct: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFTLSFEAKYTHTPSFKYFVIANSV 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFD I+TMLLTSS+AAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSVAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKK 162
           QVA+YC QV+GAL +GLLGLLVYLL+LLYSLHSLLDPLLLKK
Sbjct: 121 QVANYCSQVTGALVMGLLGLLVYLLILLYSLHSLLDPLLLKK 162

[Close]

BLAST of Csor.00g280650 vs. ExPASy TrEMBL
Match: A0A0A0K3S1 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047980 PE=3 SV=1)

HSP 1 Score: 273 bits (698), Expect = 7.80e-92
Identity = 146/162 (90.12%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGK KRICLLLLRLLALGST+SAAIVMA SHEEARFF+LSFEAKYTHTP+FKYFVIAN++
Sbjct: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFTLSFEAKYTHTPSFKYFVIANSV 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFD I+TMLLTSSIAAALAVAQIGK+GNSYAGWLPICD
Sbjct: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKDGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKK 162
           QVA+YC QV+GAL +GLLGLLVYLLLLLYSLHSLLDPLLLKK
Sbjct: 121 QVANYCSQVTGALVMGLLGLLVYLLLLLYSLHSLLDPLLLKK 162

[Close]

BLAST of Csor.00g280650 vs. ExPASy TrEMBL
Match: A0A6J1D3M2 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111016698 PE=3 SV=1)

HSP 1 Score: 257 bits (657), Expect = 4.67e-85
Identity = 138/162 (85.19%), Postives = 148/162 (91.36%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           M   KRICLLLLRLLALGST+SAAIVMA S EEA FF+LSFEAKYTHTP+FKYFV+ANA+
Sbjct: 37  MATAKRICLLLLRLLALGSTVSAAIVMATSREEATFFALSFEAKYTHTPSFKYFVVANAV 96

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLP ESLLWRLVLCFD +LTMLLTSSIAAA+AVAQIGKNGNSYAGWLPICD
Sbjct: 97  ASVYGFLVLFLPEESLLWRLVLCFDVVLTMLLTSSIAAAMAVAQIGKNGNSYAGWLPICD 156

Query: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKK 162
           QVA YC QV+GALA   LGLL+YLLLLLYSLHS+LDPLLLKK
Sbjct: 157 QVAKYCSQVTGALAAAFLGLLLYLLLLLYSLHSVLDPLLLKK 198

[Close]

BLAST of Csor.00g280650 vs. TAIR 10
Match: AT4G03540.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-45
Identity = 98/159 (61.64%), Postives = 124/159 (77.99%), Query Frame = 0


Query: 5   KRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAIASVY 64
           KRI  L+LRL A G+ L+A IVM  S E A F ++S EAKYT   AFKYFVIANA+ SVY
Sbjct: 6   KRIGGLVLRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSVY 65

Query: 65  GFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVAS 124
            F VLFLP ESLLW+ V+  D ++TMLLTSS++AALAVAQ+GK GN+ AGWLPIC QV  
Sbjct: 66  SFLVLFLPKESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQVPK 125

Query: 125 YCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 164
           +C Q++GAL  G + L++Y+LLLLYSLH+++DP LL+K+
Sbjct: 126 FCDQITGALIAGFVALVLYVLLLLYSLHAVVDPFLLQKS 164

[Close]

BLAST of Csor.00g280650 vs. TAIR 10
Match: AT1G03700.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 159.8 bits (403), Expect = 1.8e-39
Identity = 87/159 (54.72%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 5   KRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAIASVY 64
           +R+  L+LR  A  + L A I M  S E + FF +S  AKY+   AFKYFVIANAI +VY
Sbjct: 6   QRLGGLVLRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVTVY 65

Query: 65  GFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVAS 124
            F VLFLP ESLLW+ V+  D ++TMLLTSS++AA+AVAQ+GK GN+ AGWLPIC QV  
Sbjct: 66  SFLVLFLPKESLLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQVPR 125

Query: 125 YCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT 164
           +C Q++GAL  GL+ L++Y+ LL++S+H ++DP LL+K+
Sbjct: 126 FCDQITGALIAGLVALVLYVFLLIFSIHHVVDPFLLRKS 164

[Close]

BLAST of Csor.00g280650 vs. TAIR 10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-16
Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 0


Query: 2   GKPKRICLLLLRLLALGSTLSAAIVMAASHEEARF---------FSLSFEAKYTHTPAFK 61
           GK  +I LL LRLLA  +TLSAAIVM  + E   F            +F AK+ HTPAF 
Sbjct: 13  GKSCKI-LLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFV 72

Query: 62  YFVIANAIASVYGFFVLFL-----PAESLLWRL--VLCFDAILTMLLTSSIAAALAVAQI 121
           +FV+ANA+ S +   ++ L       E   +RL  V   D +   L++++  AA  +A++
Sbjct: 73  FFVVANAMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEV 132

Query: 122 GKNGNSYAGWLPICDQVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDP 158
           GKNGN +A W  ICD+ A+YC   +GAL     G+++ L++   S+  L+ P
Sbjct: 133 GKNGNKHARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRLVQP 183

[Close]

BLAST of Csor.00g280650 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-14
Identity = 54/161 (33.54%), Postives = 92/161 (57.14%), Query Frame = 0


Query: 5   KRICLL--LLRLLALGSTLSAAIVMAASHEEARFFS--LSFEAKYTHTPAFKYFVIANAI 64
           +RI +L  +LR++A  +T+ +AI+M  +HE   FF+  + F+A+Y   PA  +FV+ANA+
Sbjct: 23  RRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANAV 82

Query: 65  ASVYGFFVLFLPAESLLWR-------LVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYA 124
            S Y    L L    ++ R       L++  D  +  LLTS  ++A A+  +  NGN+  
Sbjct: 83  VSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNNKT 142

Query: 125 GWLPICDQVASYCRQVSGALALGLLGLLVYLLLLLYSLHSL 155
            W  IC Q  S+C ++SG+L    + +++ +LL+L S  +L
Sbjct: 143 NWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIAL 183

[Close]

BLAST of Csor.00g280650 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 75.5 bits (184), Expect = 4.5e-14
Identity = 58/155 (37.42%), Postives = 86/155 (55.48%), Query Frame = 0


Query: 11  LLRLLALGSTLSAAIVMAASHEEARFFS--LSFEAKYTHTPAFKYFVIANAIASVYGFFV 70
           LLRL A+  T+ AA VM  + E   FF+  L F+A Y   PAF+YFVI  A+A V  + V
Sbjct: 51  LLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVI--AVAVVASYLV 110

Query: 71  LFLP--------AESLLWRLVLCF-DAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPIC 130
           L LP          ++  RL+L   D ++  L TS+ AAA ++  +  NGN    WLPIC
Sbjct: 111 LSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPIC 170

Query: 131 DQVASYCRQVSGALALGLLGLLVYLLLLLYSLHSL 155
            Q   +C+ VS A+    + +L +++L++ S  +L
Sbjct: 171 QQFGDFCQNVSTAVVADSIAILFFIVLIIISAIAL 203

The following BLAST results are available for this feature:

BLAST of Csor.00g280650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9RW00	4.9e-50	64.42	CASP-like protein 1C1 OS=Ricinus communis OX=3988 GN=RCOM_1174750 PE=2 SV=1	[more]
B9N2D0	6.4e-50	65.84	CASP-like protein 1C2 OS=Populus trichocarpa OX=3694 GN=POPTR_0019s13170g PE=2 S...	[more]
B9N5U6	5.4e-49	63.98	CASP-like protein 1C3 OS=Populus trichocarpa OX=3694 GN=POPTR_0013s13520g PE=3 S...	[more]
A7PJ32	5.6e-46	64.19	CASP-like protein 1C2 OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03760 PE=2 SV=1	[more]
D7M2M8	2.8e-45	62.89	CASP-like protein 1C1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of Csor.00g280650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572362.1	1.99e-101	100.00	CASP-like protein 1C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG70119...	[more]
XP_023554623.1	5.42e-101	100.00	LOW QUALITY PROTEIN: CASP-like protein 1C1 [Cucurbita pepo subsp. pepo]	[more]
XP_022969278.1	3.30e-100	98.77	CASP-like protein 1C1 [Cucurbita maxima]	[more]
XP_022952801.1	1.91e-99	98.16	CASP-like protein 1C1 [Cucurbita moschata]	[more]
XP_038888604.1	2.79e-92	90.74	CASP-like protein 1C1 [Benincasa hispida]	[more]

BLAST of Csor.00g280650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0I5	1.60e-100	98.77	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111468331 PE=3 SV=1	[more]
A0A6J1GL75	9.24e-100	98.16	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455394 PE=3 SV=1	[more]
A0A1S3C0T2	3.87e-92	89.51	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103495515 PE=3 SV=1	[more]
A0A0A0K3S1	7.80e-92	90.12	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047980 PE=3 SV=1	[more]
A0A6J1D3M2	4.67e-85	85.19	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111016698 PE=3 SV=1	[more]

BLAST of Csor.00g280650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03540.1	1.7e-45	61.64	Uncharacterised protein family (UPF0497)	[more]
AT1G03700.1	1.8e-39	54.72	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	1.6e-16	37.79	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	1.2e-14	33.54	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	4.5e-14	37.42	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 4..141 e-value: 1.1E-36 score: 125.9
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 10..153 e-value: 1.0E-43 score: 146.8
None	No IPR available	PANTHER	PTHR11615:SF159	CASP-LIKE PROTEIN 1C1	coord: 4..162
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g280650.m01	Csor.00g280650.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane