Csor.00g280160 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g280160
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr19: 10463400 .. 10465562 (-)
RNA-Seq Expression	Csor.00g280160
Synteny	Csor.00g280160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCCATTGCCACAGCTACTCTTAAACCATTCATACTTCATAACGCAAACATTTGCAAGAAATCTCTGCATACAAATACTATAACCAATCCCAAGTCCTCTCTGAGATTCCCACTTACTTCTCTACAATGTGGAGCCATTTTGCAATCACTCACCAACACCAAATCAACTGCACAAGGCCGGAAACTCCATGCCTGTATGCTCACATGTGGAAATCTTCAAAACAATACCTATCTCAGCTCCAAACTTGCTGCATTTTATGCCGCTTGTGGTCGCATGATAGAAGCCCAAGTGATATTCGATGGGGTTGCTTTGAAAAATTCCTTCCTGTGGAATTTTATGATTAGAGGTTATGCTTCTGGTGGTGTTATTGCTTACGAGGCCCTTGCTATGTATCGTAAAATGCTAAGATTAGGAATTGTTGACAATTTTACTTTCCCTTTTGTTCTAAAAGCGTGTGGTGATCTGGGTCTTAGTGAAATGGGAAGGGAAATTCATACTCATGTGGAGGTTTGTGGGTGGGATTCAGATATTTATGTGAACAATTCTCTTCTAGCAATGTACCTGAAGTTTGGGAATTTGGATGTTGCAAGGAAGGTGTTTGATAAAATGCCCGACAGGGATACAACTTCTTGGAATACTCTGCTTTCGGGTTACGTGAGGAACAACAATGCAATGGAAGCTTTAATGATTTTTTATCTAATGGGAAAGGCTGAGTTGAAAGCAGATGGGACTACTTTGCTTGCACTCCTCTCTGCTTGTGTTGATTTGGCTGCCATTAAGCAGGGGAAGGAGATCCATTGTTATGCTATACGCAATAATTATGTTTCTTCGAATGAGTTCCTGATGAACTCGCTGATTGATATGTACTCAAATTGCAATTCTGTTGCTGTTGCTAGACAATTATTCGAGGAGTTGAAAATTAAAGATACTGTATCATGGAATTCTATAATTTCATGCTATCAACGAAGTGGAGATGCTTTTGAAAGTTTAAGACTTTTCTGTCAAATGCTAATCGAAGAAACAGCAGCTCCGGATGAGATAACTCTCGTGGCTGTCCTAGGTGCTTGTGAAAAGATTACAGCCCTGCAATTTGGGAAGTCAGTCCATTCATATCTGACTAAGACAGGGATTTTCTTAAATTCCTTTTTAGGAACTGCCCTTATAGACATGTATGCTAAGTGTGGAGAATTATCTTGCTCTTACCACGTCTTTTGTGAGATGACTCAGAAGAATATGGTTGCTTGGAGTGCTATGATTGCAGCTTATGGAATTCATGGGAGGGGAAAAGAGGCTATATCCGTTTTCAATGAAATGACAGCAAATGGCATTAGTCCAGATGAGGGTGTTCTAACTTCTGTTCTATCAGCATGTAGCCATTCAGGCTTGGTTGATGAGGGTAAAAAGATTTTCAATGAAATGACCATCAAGTATGATATCAAACCGGGACCAGCTCATTACTTATGTTTGGTAGATCTTCTTGGCAGAGCAGGGCTACTGAATGAAGCATACGAACTGGTAAAGCGTATGGAAGTCGAACCATCAGCTGATATATGGGCTGCACTCCTCTCTGCTTGTAGGCTTCATCGAAACGTTGTGTTGGCAGAGATTTCAGCTCAAAATATTTTCAGAACGAATCCAACAAGGGTTAGTAGCTACATCTGTCTTTCCAATATTTATGCTGCTATGAAACAATGGACTGCTGTGGAAAAAGTGAGAAGTACAATGAGGAATTATGGATTGAAGAAACCAGCGGGGTACAGCTTAATTGAGCTTGATAGCCAGGTTCATATGTTCTTTGTTGGAGACAAGTCACACCAACAAACAAAAGATATATATGCTAAACTGAAGGATATAAGTTGGCGACTCAAGGAGAAAGGGCACAAGCCCGATACTAGTTCAATTTTATATGATGTCAATGAAGAGCAAAAGGAGAAGATGCTTTGGGATCATAGTGAGCGATTGGCTATTGCTTTTGCTCTTCTAAATACCCCTCCAGGGACCAAAATTAGGATTACTAAGAATCTTCGAGTATGTGCAGATTGCCATACAGTAACAAAATTGATATCGAAACTCACGGATCGAGAAATCGTCATGCGTGATAACCACAGGTTTCACCATTTTATTGATGGCATTTGTTCTTGTGGGGATTTTTGGTAA

mRNA sequence

ATGATTGCCATTGCCACAGCTACTCTTAAACCATTCATACTTCATAACGCAAACATTTGCAAGAAATCTCTGCATACAAATACTATAACCAATCCCAAGTCCTCTCTGAGATTCCCACTTACTTCTCTACAATGTGGAGCCATTTTGCAATCACTCACCAACACCAAATCAACTGCACAAGGCCGGAAACTCCATGCCTGTATGCTCACATGTGGAAATCTTCAAAACAATACCTATCTCAGCTCCAAACTTGCTGCATTTTATGCCGCTTGTGGTCGCATGATAGAAGCCCAAGTGATATTCGATGGGGTTGCTTTGAAAAATTCCTTCCTGTGGAATTTTATGATTAGAGGTTATGCTTCTGGTGGTGTTATTGCTTACGAGGCCCTTGCTATGTATCGTAAAATGCTAAGATTAGGAATTGTTGACAATTTTACTTTCCCTTTTGTTCTAAAAGCGTGTGGTGATCTGGGTCTTAGTGAAATGGGAAGGGAAATTCATACTCATGTGGAGGTTTGTGGGTGGGATTCAGATATTTATGTGAACAATTCTCTTCTAGCAATGTACCTGAAGTTTGGGAATTTGGATGTTGCAAGGAAGGTGTTTGATAAAATGCCCGACAGGGATACAACTTCTTGGAATACTCTGCTTTCGGGTTACGTGAGGAACAACAATGCAATGGAAGCTTTAATGATTTTTTATCTAATGGGAAAGGCTGAGTTGAAAGCAGATGGGACTACTTTGCTTGCACTCCTCTCTGCTTGTGTTGATTTGGCTGCCATTAAGCAGGGGAAGGAGATCCATTGTTATGCTATACGCAATAATTATGTTTCTTCGAATGAGTTCCTGATGAACTCGCTGATTGATATGTACTCAAATTGCAATTCTGTTGCTGTTGCTAGACAATTATTCGAGGAGTTGAAAATTAAAGATACTGTATCATGGAATTCTATAATTTCATGCTATCAACGAAGTGGAGATGCTTTTGAAAGTTTAAGACTTTTCTGTCAAATGCTAATCGAAGAAACAGCAGCTCCGGATGAGATAACTCTCGTGGCTGTCCTAGGTGCTTGTGAAAAGATTACAGCCCTGCAATTTGGGAAGTCAGTCCATTCATATCTGACTAAGACAGGGATTTTCTTAAATTCCTTTTTAGGAACTGCCCTTATAGACATGTATGCTAAGTGTGGAGAATTATCTTGCTCTTACCACGTCTTTTGTGAGATGACTCAGAAGAATATGGTTGCTTGGAGTGCTATGATTGCAGCTTATGGAATTCATGGGAGGGGAAAAGAGGCTATATCCGTTTTCAATGAAATGACAGCAAATGGCATTAGTCCAGATGAGGGTGTTCTAACTTCTGTTCTATCAGCATGTAGCCATTCAGGCTTGGTTGATGAGGGTAAAAAGATTTTCAATGAAATGACCATCAAGTATGATATCAAACCGGGACCAGCTCATTACTTATGTTTGGTAGATCTTCTTGGCAGAGCAGGGCTACTGAATGAAGCATACGAACTGGTAAAGCGTATGGAAGTCGAACCATCAGCTGATATATGGGCTGCACTCCTCTCTGCTTGTAGGCTTCATCGAAACGTTGTGTTGGCAGAGATTTCAGCTCAAAATATTTTCAGAACGAATCCAACAAGGGTTAGTAGCTACATCTGTCTTTCCAATATTTATGCTGCTATGAAACAATGGACTGCTGTGGAAAAAGTGAGAAGTACAATGAGGAATTATGGATTGAAGAAACCAGCGGGGTACAGCTTAATTGAGCTTGATAGCCAGGTTCATATGTTCTTTGTTGGAGACAAGTCACACCAACAAACAAAAGATATATATGCTAAACTGAAGGATATAAGTTGGCGACTCAAGGAGAAAGGGCACAAGCCCGATACTAGTTCAATTTTATATGATGTCAATGAAGAGCAAAAGGAGAAGATGCTTTGGGATCATAGTGAGCGATTGGCTATTGCTTTTGCTCTTCTAAATACCCCTCCAGGGACCAAAATTAGGATTACTAAGAATCTTCGAGTATGTGCAGATTGCCATACAGTAACAAAATTGATATCGAAACTCACGGATCGAGAAATCGTCATGCGTGATAACCACAGGTTTCACCATTTTATTGATGGCATTTGTTCTTGTGGGGATTTTTGGTAA

Coding sequence (CDS)

ATGATTGCCATTGCCACAGCTACTCTTAAACCATTCATACTTCATAACGCAAACATTTGCAAGAAATCTCTGCATACAAATACTATAACCAATCCCAAGTCCTCTCTGAGATTCCCACTTACTTCTCTACAATGTGGAGCCATTTTGCAATCACTCACCAACACCAAATCAACTGCACAAGGCCGGAAACTCCATGCCTGTATGCTCACATGTGGAAATCTTCAAAACAATACCTATCTCAGCTCCAAACTTGCTGCATTTTATGCCGCTTGTGGTCGCATGATAGAAGCCCAAGTGATATTCGATGGGGTTGCTTTGAAAAATTCCTTCCTGTGGAATTTTATGATTAGAGGTTATGCTTCTGGTGGTGTTATTGCTTACGAGGCCCTTGCTATGTATCGTAAAATGCTAAGATTAGGAATTGTTGACAATTTTACTTTCCCTTTTGTTCTAAAAGCGTGTGGTGATCTGGGTCTTAGTGAAATGGGAAGGGAAATTCATACTCATGTGGAGGTTTGTGGGTGGGATTCAGATATTTATGTGAACAATTCTCTTCTAGCAATGTACCTGAAGTTTGGGAATTTGGATGTTGCAAGGAAGGTGTTTGATAAAATGCCCGACAGGGATACAACTTCTTGGAATACTCTGCTTTCGGGTTACGTGAGGAACAACAATGCAATGGAAGCTTTAATGATTTTTTATCTAATGGGAAAGGCTGAGTTGAAAGCAGATGGGACTACTTTGCTTGCACTCCTCTCTGCTTGTGTTGATTTGGCTGCCATTAAGCAGGGGAAGGAGATCCATTGTTATGCTATACGCAATAATTATGTTTCTTCGAATGAGTTCCTGATGAACTCGCTGATTGATATGTACTCAAATTGCAATTCTGTTGCTGTTGCTAGACAATTATTCGAGGAGTTGAAAATTAAAGATACTGTATCATGGAATTCTATAATTTCATGCTATCAACGAAGTGGAGATGCTTTTGAAAGTTTAAGACTTTTCTGTCAAATGCTAATCGAAGAAACAGCAGCTCCGGATGAGATAACTCTCGTGGCTGTCCTAGGTGCTTGTGAAAAGATTACAGCCCTGCAATTTGGGAAGTCAGTCCATTCATATCTGACTAAGACAGGGATTTTCTTAAATTCCTTTTTAGGAACTGCCCTTATAGACATGTATGCTAAGTGTGGAGAATTATCTTGCTCTTACCACGTCTTTTGTGAGATGACTCAGAAGAATATGGTTGCTTGGAGTGCTATGATTGCAGCTTATGGAATTCATGGGAGGGGAAAAGAGGCTATATCCGTTTTCAATGAAATGACAGCAAATGGCATTAGTCCAGATGAGGGTGTTCTAACTTCTGTTCTATCAGCATGTAGCCATTCAGGCTTGGTTGATGAGGGTAAAAAGATTTTCAATGAAATGACCATCAAGTATGATATCAAACCGGGACCAGCTCATTACTTATGTTTGGTAGATCTTCTTGGCAGAGCAGGGCTACTGAATGAAGCATACGAACTGGTAAAGCGTATGGAAGTCGAACCATCAGCTGATATATGGGCTGCACTCCTCTCTGCTTGTAGGCTTCATCGAAACGTTGTGTTGGCAGAGATTTCAGCTCAAAATATTTTCAGAACGAATCCAACAAGGGTTAGTAGCTACATCTGTCTTTCCAATATTTATGCTGCTATGAAACAATGGACTGCTGTGGAAAAAGTGAGAAGTACAATGAGGAATTATGGATTGAAGAAACCAGCGGGGTACAGCTTAATTGAGCTTGATAGCCAGGTTCATATGTTCTTTGTTGGAGACAAGTCACACCAACAAACAAAAGATATATATGCTAAACTGAAGGATATAAGTTGGCGACTCAAGGAGAAAGGGCACAAGCCCGATACTAGTTCAATTTTATATGATGTCAATGAAGAGCAAAAGGAGAAGATGCTTTGGGATCATAGTGAGCGATTGGCTATTGCTTTTGCTCTTCTAAATACCCCTCCAGGGACCAAAATTAGGATTACTAAGAATCTTCGAGTATGTGCAGATTGCCATACAGTAACAAAATTGATATCGAAACTCACGGATCGAGAAATCGTCATGCGTGATAACCACAGGTTTCACCATTTTATTGATGGCATTTGTTCTTGTGGGGATTTTTGGTAA

Protein sequence

MIAIATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQGRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYASGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIYVNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEKITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAMIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYDIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISAQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW

Homology

[Close]

BLAST of Csor.00g280160 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 3.0e-152
Identity = 296/743 (39.84%), Postives = 427/743 (57.47%), Query Frame = 0


Query: 24  LHTNTITNPKSSLRF---------PLTSLQCGAILQSLTNTKSTAQGRKLHACMLTCGNL 83
           L  + +T P SS  F         P  S++    L  L N K+    R +HA M+  G L
Sbjct: 3   LSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG-L 62

Query: 84  QNNTYLSSKLAAFYAACGR---MIEAQVIFDGVALKNSFLWNFMIRGYASGGVIAYEALA 143
            N  Y  SKL  F         +  A  +F  +   N  +WN M RG+A        AL 
Sbjct: 63  HNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSS-DPVSALK 122

Query: 144 MYRKMLRLGIVDN-FTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIYVNNSLLAMYL 203
           +Y  M+ LG++ N +TFPFVLK+C      + G++IH HV   G D D+YV+ SL++MY+
Sbjct: 123 LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV 182

Query: 204 KFGNLDVARKVFDKMPDR-------------------------------DTTSWNTLLSG 263
           + G L+ A KVFDK P R                               D  SWN ++SG
Sbjct: 183 QNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG 242

Query: 264 YVRNNNAMEALMIFYLMGKAELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSS 323
           Y    N  EAL +F  M K  ++ D +T++ ++SAC    +I+ G+++H + I ++   S
Sbjct: 243 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW-IDDHGFGS 302

Query: 324 NEFLMNSLIDMYSNCNSVAVARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQML 383
           N  ++N+LID+YS C  +  A  LFE L  KD +SWN++I  Y       E+L LF +ML
Sbjct: 303 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 362

Query: 384 IEETAAPDEITLVAVLGACEKITALQFGKSVHSYLTK--TGIFLNSFLGTALIDMYAKCG 443
                 P+++T++++L AC  + A+  G+ +H Y+ K   G+   S L T+LIDMYAKCG
Sbjct: 363 -RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 422

Query: 444 ELSCSYHVFCEMTQKNMVAWSAMIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLS 503
           ++  ++ VF  +  K++ +W+AMI  + +HGR   +  +F+ M   GI PD+     +LS
Sbjct: 423 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 482

Query: 504 ACSHSGLVDEGKKIFNEMTIKYDIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSA 563
           ACSHSG++D G+ IF  MT  Y + P   HY C++DLLG +GL  EA E++  ME+EP  
Sbjct: 483 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 542

Query: 564 DIWAALLSACRLHRNVVLAEISAQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTM 623
            IW +LL AC++H NV L E  A+N+ +  P    SY+ LSNIYA+  +W  V K R+ +
Sbjct: 543 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 602

Query: 624 RNYGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSIL 683
            + G+KK  G S IE+DS VH F +GDK H + ++IY  L+++   L++ G  PDTS +L
Sbjct: 603 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVL 662

Query: 684 YDVNEEQKEKMLWDHSERLAIAFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDRE 721
            ++ EE KE  L  HSE+LAIAF L++T PGTK+ I KNLRVC +CH  TKLISK+  RE
Sbjct: 663 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKRE 722

[Close]

BLAST of Csor.00g280160 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 4.4e-151
Identity = 279/665 (41.95%), Postives = 419/665 (63.01%), Query Frame = 0


Query: 59  AQGRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRG 118
           AQ +++HA +L  G LQ + +L +KL    ++ G +  A+ +FD +     F WN +IRG
Sbjct: 35  AQLKQIHARLLVLG-LQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 94

Query: 119 YASGGVIAYEALAMYRKM-LRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDS 178
           Y+       +AL MY  M L     D+FTFP +LKAC  L   +MGR +H  V   G+D+
Sbjct: 95  YSRNNHF-QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 154

Query: 179 DIYVNNSLLAMYLKFGNLDVARKVFD--KMPDRDTTSWNTLLSGYVRNNNAMEALMIFYL 238
           D++V N L+A+Y K   L  AR VF+   +P+R   SW  ++S Y +N   MEAL IF  
Sbjct: 155 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 214

Query: 239 MGKAELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCN 298
           M K ++K D   L+++L+A   L  +KQG+ IH   ++       + L+ SL  MY+ C 
Sbjct: 215 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI-SLNTMYAKCG 274

Query: 299 SVAVARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVL 358
            VA A+ LF+++K  + + WN++IS Y ++G A E++ +F +M I +   PD I++ + +
Sbjct: 275 QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAI 334

Query: 359 GACEKITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMV 418
            AC ++ +L+  +S++ Y+ ++    + F+ +ALIDM+AKCG +  +  VF     +++V
Sbjct: 335 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 394

Query: 419 AWSAMIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEM 478
            WSAMI  YG+HGR +EAIS++  M   G+ P++     +L AC+HSG+V EG   FN M
Sbjct: 395 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 454

Query: 479 TIKYDIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVL 538
              + I P   HY C++DLLGRAG L++AYE++K M V+P   +W ALLSAC+ HR+V L
Sbjct: 455 A-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 514

Query: 539 AEISAQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDS 598
            E +AQ +F  +P+    Y+ LSN+YAA + W  V +VR  M+  GL K  G S +E+  
Sbjct: 515 GEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 574

Query: 599 QVHMFFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSER 658
           ++  F VGDKSH + ++I  +++ I  RLKE G   +  + L+D+N+E+ E+ L  HSER
Sbjct: 575 RLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSER 634

Query: 659 LAIAFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICS 718
           +AIA+ L++TP GT +RITKNLR C +CH  TKLISKL DREIV+RD +RFHHF DG+CS
Sbjct: 635 IAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCS 694

Query: 719 CGDFW 721
           CGD+W
Sbjct: 695 CGDYW 694

[Close]

BLAST of Csor.00g280160 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 1.4e-144
Identity = 271/683 (39.68%), Postives = 417/683 (61.05%), Query Frame = 0


Query: 40  LTSLQCGAILQSLTNTKSTAQGRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQV 99
           + S     + +S ++ +S   G +LH  +L  G  + N+ + + L AFY    R+  A+ 
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS-VGNSLVAFYLKNQRVDSARK 252

Query: 100 IFDGVALKNSFLWNFMIRGYASGGVIAYEALAMYRKMLRLGI-VDNFTFPFVLKACGDLG 159
           +FD +  ++   WN +I GY S G +A + L+++ +ML  GI +D  T   V   C D  
Sbjct: 253 VFDEMTERDVISWNSIINGYVSNG-LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR 312

Query: 160 LSEMGREIHT-HVEVCGWDSDIYVNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLL 219
           L  +GR +H+  V+ C    D +  N+LL MY K G+LD A+ VF +M DR   S+ +++
Sbjct: 313 LISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 372

Query: 220 SGYVRNNNAMEALMIFYLMGKAELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYV 279
           +GY R   A EA+ +F  M +  +  D  T+ A+L+ C     + +GK +H + I+ N +
Sbjct: 373 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDL 432

Query: 280 SSNEFLMNSLIDMYSNCNSVAVARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQ 339
             + F+ N+L+DMY+ C S+  A  +F E+++KD +SWN+II  Y ++  A E+L LF  
Sbjct: 433 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 492

Query: 340 MLIEETAAPDEITLVAVLGACEKITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCG 399
           +L E+  +PDE T+  VL AC  ++A   G+ +H Y+ + G F +  +  +L+DMYAKCG
Sbjct: 493 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 552

Query: 400 ELSCSYHVFCEMTQKNMVAWSAMIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLS 459
            L  ++ +F ++  K++V+W+ MIA YG+HG GKEAI++FN+M   GI  DE    S+L 
Sbjct: 553 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLY 612

Query: 460 ACSHSGLVDEGKKIFNEMTIKYDIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSA 519
           ACSHSGLVDEG + FN M  +  I+P   HY C+VD+L R G L +AY  ++ M + P A
Sbjct: 613 ACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDA 672

Query: 520 DIWAALLSACRLHRNVVLAEISAQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTM 579
            IW ALL  CR+H +V LAE  A+ +F   P     Y+ ++NIYA  ++W  V+++R  +
Sbjct: 673 TIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRI 732

Query: 580 RNYGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSIL 639
              GL+K  G S IE+  +V++F  GD S+ +T++I A L+ +  R+ E+G+ P T   L
Sbjct: 733 GQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYAL 792

Query: 640 YDVNEEQKEKMLWDHSERLAIAFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDRE 699
            D  E +KE+ L  HSE+LA+A  ++++  G  IR+TKNLRVC DCH + K +SKLT RE
Sbjct: 793 IDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRRE 852

Query: 700 IVMRDNHRFHHFIDGICSCGDFW 721
           IV+RD++RFH F DG CSC  FW
Sbjct: 853 IVLRDSNRFHQFKDGHCSCRGFW 871

[Close]

BLAST of Csor.00g280160 vs. ExPASy Swiss-Prot
Match: Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 513.1 bits (1320), Expect = 5.2e-144
Identity = 261/662 (39.43%), Postives = 406/662 (61.33%), Query Frame = 0


Query: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120
           G+++HA +L      +  Y+ + L A Y  CG+M +A+ I   +   +   WN +I+GY 
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362

Query: 121 SGGVIAYEALAMYRKMLRLG-IVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDI 180
              ++  EAL  +  M+  G   D  +   ++ A G L     G E+H +V   GWDS++
Sbjct: 363 Q-NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 422

Query: 181 YVNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKA 240
            V N+L+ MY K        + F +M D+D  SW T+++GY +N+  +EAL +F  + K 
Sbjct: 423 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 482

Query: 241 ELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAV 300
            ++ D   L ++L A   L ++   KEIHC+ +R   + +   + N L+D+Y  C ++  
Sbjct: 483 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT--VIQNELVDVYGKCRNMGY 542

Query: 301 ARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACE 360
           A ++FE +K KD VSW S+IS    +G+  E++ LF +M +E   + D + L+ +L A  
Sbjct: 543 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM-VETGLSADSVALLCILSAAA 602

Query: 361 KITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSA 420
            ++AL  G+ +H YL + G  L   +  A++DMYA CG+L  +  VF  + +K ++ +++
Sbjct: 603 SLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 662

Query: 421 MIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKY 480
           MI AYG+HG GK A+ +F++M    +SPD     ++L ACSH+GL+DEG+     M  +Y
Sbjct: 663 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 722

Query: 481 DIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEIS 540
           +++P P HY+CLVD+LGRA  + EA+E VK M+ EP+A++W ALL+ACR H    + EI+
Sbjct: 723 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 782

Query: 541 AQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHM 600
           AQ +    P    + + +SN++A   +W  VEKVR+ M+  G++K  G S IE+D +VH 
Sbjct: 783 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHK 842

Query: 601 FFVGDKSHQQTKDIYAKLKDISWRL-KEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAI 660
           F   DKSH ++K+IY KL +++ +L +E G+  DT  +L++V+E +K +ML  HSER+AI
Sbjct: 843 FTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAI 902

Query: 661 AFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGD 720
           A+ LL TP    +RITKNLRVC DCHT  KL+SKL  R+IVMRD +RFHHF  G+CSCGD
Sbjct: 903 AYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGD 960

[Close]

BLAST of Csor.00g280160 vs. ExPASy Swiss-Prot
Match: O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 511.9 bits (1317), Expect = 1.2e-143
Identity = 260/665 (39.10%), Postives = 408/665 (61.35%), Query Frame = 0


Query: 56  KSTAQGRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFM 115
           ++   G K+H   L  G +  + Y+++ L   Y+    +  A+++FD + +++   WN M
Sbjct: 164 RTVIDGNKIHCLALKFGFMW-DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAM 223

Query: 116 IRGYASGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGW 175
           I GY   G  A EAL +      L  +D+ T   +L AC + G    G  IH++    G 
Sbjct: 224 ISGYCQSG-NAKEALTLSN---GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 283

Query: 176 DSDIYVNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYL 235
           +S+++V+N L+ +Y +FG L   +KVFD+M  RD  SWN+++  Y  N   + A+ +F  
Sbjct: 284 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 343

Query: 236 MGKAELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCN 295
           M  + ++ D  TL++L S    L  I+  + +  + +R  +   +  + N+++ MY+   
Sbjct: 344 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 403

Query: 296 SVAVARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVL 355
            V  AR +F  L   D +SWN+IIS Y ++G A E++ ++  M  E   A ++ T V+VL
Sbjct: 404 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 463

Query: 356 GACEKITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMV 415
            AC +  AL+ G  +H  L K G++L+ F+ T+L DMY KCG L  +  +F ++ + N V
Sbjct: 464 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 523

Query: 416 AWSAMIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEM 475
            W+ +IA +G HG G++A+ +F EM   G+ PD     ++LSACSHSGLVDEG+  F  M
Sbjct: 524 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 583

Query: 476 TIKYDIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVL 535
              Y I P   HY C+VD+ GRAG L  A + +K M ++P A IW ALLSACR+H NV L
Sbjct: 584 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDL 643

Query: 536 AEISAQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDS 595
            +I+++++F   P  V  ++ LSN+YA+  +W  V+++RS     GL+K  G+S +E+D+
Sbjct: 644 GKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDN 703

Query: 596 QVHMFFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSER 655
           +V +F+ G+++H   +++Y +L  +  +LK  G+ PD   +L DV +++KE +L  HSER
Sbjct: 704 KVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSER 763

Query: 656 LAIAFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICS 715
           LAIAFAL+ TP  T IRI KNLRVC DCH+VTK ISK+T+REI++RD++RFHHF +G+CS
Sbjct: 764 LAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCS 823

Query: 716 CGDFW 721
           CGD+W
Sbjct: 824 CGDYW 823

[Close]

BLAST of Csor.00g280160 vs. NCBI nr
Match: KAG6572313.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011924.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1455 bits (3767), Expect = 0.0
Identity = 720/720 (100.00%), Postives = 720/720 (100.00%), Query Frame = 0


Query: 1   MIAIATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQ 60
           MIAIATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQ
Sbjct: 1   MIAIATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQ 60

Query: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120
           GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA
Sbjct: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120

Query: 121 SGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIY 180
           SGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIY
Sbjct: 121 SGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIY 180

Query: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAE 240
           VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAE
Sbjct: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAE 240

Query: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA 300
           LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA
Sbjct: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA 300

Query: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK 360
           RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK
Sbjct: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK 360

Query: 361 ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAM 420
           ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAM
Sbjct: 361 ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAM 420

Query: 421 IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480
           IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD
Sbjct: 421 IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480

Query: 481 IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISA 540
           IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISA
Sbjct: 481 IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISA 540

Query: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMF 600
           QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMF
Sbjct: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMF 600

Query: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660
           FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF
Sbjct: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660

Query: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720
           ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW
Sbjct: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720

[Close]

BLAST of Csor.00g280160 vs. NCBI nr
Match: XP_022953113.1 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1439 bits (3725), Expect = 0.0
Identity = 708/720 (98.33%), Postives = 717/720 (99.58%), Query Frame = 0


Query: 1   MIAIATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQ 60
           MIAIATATLKPFILHNANICKKSLHTNTITNPKS+LRFPLTSLQCGAILQSLTNTKSTAQ
Sbjct: 1   MIAIATATLKPFILHNANICKKSLHTNTITNPKSALRFPLTSLQCGAILQSLTNTKSTAQ 60

Query: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120
           GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA
Sbjct: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120

Query: 121 SGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIY 180
           SGG+IAY+ALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHT VEVCGWDSD+Y
Sbjct: 121 SGGIIAYKALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTQVEVCGWDSDVY 180

Query: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAE 240
           VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTL+SGYVRNNNAMEALMIFYLMGKA 
Sbjct: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLISGYVRNNNAMEALMIFYLMGKAG 240

Query: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA 300
           LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA
Sbjct: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA 300

Query: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK 360
           RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK
Sbjct: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK 360

Query: 361 ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAM 420
           ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCS+H+FCEMTQKNMVAWSAM
Sbjct: 361 ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSHHIFCEMTQKNMVAWSAM 420

Query: 421 IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480
           IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD
Sbjct: 421 IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480

Query: 481 IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISA 540
           IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRN+VLAEISA
Sbjct: 481 IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNIVLAEISA 540

Query: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMF 600
           QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVR+TMRNYGLKKPAGYS IELDSQVHMF
Sbjct: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRTTMRNYGLKKPAGYSSIELDSQVHMF 600

Query: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660
           FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF
Sbjct: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660

Query: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720
           ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW
Sbjct: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720

[Close]

BLAST of Csor.00g280160 vs. NCBI nr
Match: XP_023554404.1 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1420 bits (3677), Expect = 0.0
Identity = 701/720 (97.36%), Postives = 711/720 (98.75%), Query Frame = 0


Query: 1   MIAIATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQ 60
           MIAIATA LK F+LHNA+ICKKSLHTNT+TNPKS+LRFPLTSLQCGAILQSLTN KS AQ
Sbjct: 1   MIAIATAILKSFLLHNASICKKSLHTNTVTNPKSALRFPLTSLQCGAILQSLTNNKSIAQ 60

Query: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120
           GRKLHACMLT GNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA
Sbjct: 61  GRKLHACMLTSGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120

Query: 121 SGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIY 180
           SGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIY
Sbjct: 121 SGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIY 180

Query: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAE 240
           VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTL+SGYVRNNNAMEALMIFYLMGKA 
Sbjct: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLISGYVRNNNAMEALMIFYLMGKAG 240

Query: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA 300
           LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNC+S+AVA
Sbjct: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCSSIAVA 300

Query: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK 360
           RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK
Sbjct: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK 360

Query: 361 ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAM 420
           ITALQFGKSVHSYLTK GIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAM
Sbjct: 361 ITALQFGKSVHSYLTKIGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAM 420

Query: 421 IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480
           IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGK IFNEMTIKYD
Sbjct: 421 IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKTIFNEMTIKYD 480

Query: 481 IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISA 540
           I+PGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISA
Sbjct: 481 IRPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISA 540

Query: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMF 600
           QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVR+TMRNYGLKKPAGYSLIELDSQVHMF
Sbjct: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRTTMRNYGLKKPAGYSLIELDSQVHMF 600

Query: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660
           FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDV+EEQKEKMLWDHSERLAIAF
Sbjct: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVSEEQKEKMLWDHSERLAIAF 660

Query: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720
           ALLNTPPGTKIRITKNLRVCADCHTVTKLISKL DREIVMRDNHRFHHFIDGICSCGDFW
Sbjct: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLMDREIVMRDNHRFHHFIDGICSCGDFW 720

[Close]

BLAST of Csor.00g280160 vs. NCBI nr
Match: XP_022968999.1 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1419 bits (3672), Expect = 0.0
Identity = 697/720 (96.81%), Postives = 711/720 (98.75%), Query Frame = 0


Query: 1   MIAIATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQ 60
           MIAIATATLKPFILHNANICKKSLHTNTITN KS+LR PLTSLQCGAILQSLTNTKS AQ
Sbjct: 1   MIAIATATLKPFILHNANICKKSLHTNTITNSKSALRIPLTSLQCGAILQSLTNTKSIAQ 60

Query: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120
           GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA
Sbjct: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120

Query: 121 SGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIY 180
           SGG+IAY+ALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHT VEVCGWDSDIY
Sbjct: 121 SGGIIAYKALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTQVEVCGWDSDIY 180

Query: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAE 240
           VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTL+SGYVRNNNAMEALMIFYLMGKA 
Sbjct: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLISGYVRNNNAMEALMIFYLMGKAG 240

Query: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA 300
           LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNC+SVAVA
Sbjct: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCSSVAVA 300

Query: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK 360
           RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFC+MLIEETAAPDEITLVAVLGACEK
Sbjct: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCRMLIEETAAPDEITLVAVLGACEK 360

Query: 361 ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAM 420
           ITALQFGKSVHSYLTK GIF NS+LGTA+IDMYAKCGELSCS+H+FCEMTQKNMVAWSAM
Sbjct: 361 ITALQFGKSVHSYLTKMGIFFNSYLGTAIIDMYAKCGELSCSHHIFCEMTQKNMVAWSAM 420

Query: 421 IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480
           I AYGIHGRGKEAIS+FNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD
Sbjct: 421 IVAYGIHGRGKEAISIFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480

Query: 481 IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISA 540
           IKPGPAHYLC+VDLLGRAGLLNEAYELVKRMEV+PSADIWAALLSACRLHRNVVLAEISA
Sbjct: 481 IKPGPAHYLCMVDLLGRAGLLNEAYELVKRMEVKPSADIWAALLSACRLHRNVVLAEISA 540

Query: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMF 600
           QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVR+TMRNYGLKKPAGYSLIELDSQVHMF
Sbjct: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRTTMRNYGLKKPAGYSLIELDSQVHMF 600

Query: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660
           FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF
Sbjct: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660

Query: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720
           ALLNTPPGTKIRITKNLRVCADCHTVTKLISKL DREIVMRDNHRFHHFIDGICSCGDFW
Sbjct: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLMDREIVMRDNHRFHHFIDGICSCGDFW 720

[Close]

BLAST of Csor.00g280160 vs. NCBI nr
Match: XP_038887372.1 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 1295 bits (3350), Expect = 0.0
Identity = 635/721 (88.07%), Postives = 671/721 (93.07%), Query Frame = 0


Query: 1   MIAIATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQ 60
           MIAIA AT KPFILHNANI KKSLHT T+TNP   LR PLTSLQCGAILQSLTNTKS  Q
Sbjct: 1   MIAIAKATRKPFILHNANIYKKSLHTTTVTNPSPPLRVPLTSLQCGAILQSLTNTKSFEQ 60

Query: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120
           GRKLHA ML CGNLQNNTYLSSKLAAFYAACGRM +A+VIF+GV LKNSFLWNFMIRGYA
Sbjct: 61  GRKLHAYMLACGNLQNNTYLSSKLAAFYAACGRMTQAEVIFNGVVLKNSFLWNFMIRGYA 120

Query: 121 SGGVIAYEALAMYRKMLRLGI-VDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDI 180
           S G  AY+ALAMYRKML  G   DNFTFPFVLKACGDLGL E+G EIH+ VE+CGW+SDI
Sbjct: 121 SDGTNAYKALAMYRKMLAFGYNADNFTFPFVLKACGDLGLREIGMEIHSQVEICGWESDI 180

Query: 181 YVNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKA 240
           YVNNSLLAMYLKFGN+DVARKVFDKMP+RD TSWNT++SGYVRNNN+MEAL IFYLM K 
Sbjct: 181 YVNNSLLAMYLKFGNVDVARKVFDKMPERDLTSWNTMISGYVRNNNSMEALTIFYLMEKG 240

Query: 241 ELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAV 300
            LKADGTTLLALL+AC DLAAIKQGKEIHCYA+RNNY + NEFLMNSLIDMYSNC+ VA 
Sbjct: 241 GLKADGTTLLALLTACADLAAIKQGKEIHCYAVRNNYFTLNEFLMNSLIDMYSNCSCVAA 300

Query: 301 ARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACE 360
           ARQLFEELKIKDTVSWNSIISC+QRSGDAFESLRLFCQML E+TAAPDEIT+VAVLGACE
Sbjct: 301 ARQLFEELKIKDTVSWNSIISCHQRSGDAFESLRLFCQMLTEDTAAPDEITIVAVLGACE 360

Query: 361 KITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSA 420
           KI ALQFGKSVHSYLTK GIFLNSFLGTALIDMYAKCGELSCS+HVFCEMTQKNMVAWSA
Sbjct: 361 KIAALQFGKSVHSYLTKIGIFLNSFLGTALIDMYAKCGELSCSHHVFCEMTQKNMVAWSA 420

Query: 421 MIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKY 480
           MIAAYGIHG+GKEAIS+F+EMTANGISPD GVLTSVLSACSHSGLVDEGK  FNEMT KY
Sbjct: 421 MIAAYGIHGQGKEAISIFDEMTANGISPDYGVLTSVLSACSHSGLVDEGKMFFNEMTNKY 480

Query: 481 DIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEIS 540
           +IKPG AH+LCLVDLLGRAGLLNEAYELVKR+EVEPSADIWA LLSACRLHRNV LAEIS
Sbjct: 481 NIKPGSAHFLCLVDLLGRAGLLNEAYELVKRIEVEPSADIWATLLSACRLHRNVELAEIS 540

Query: 541 AQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHM 600
           AQNIFRTNP++VSSYICLSNIYAAMKQWTAVEKVR+TMR  GLKKPAGYSLIELDSQ+HM
Sbjct: 541 AQNIFRTNPSKVSSYICLSNIYAAMKQWTAVEKVRATMRKRGLKKPAGYSLIELDSQIHM 600

Query: 601 FFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIA 660
           FFVGDKSHQ+TKDIYAKLKDISWRLKE+G+KPDTS +LYDVNEEQKEKMLWDHSERLAIA
Sbjct: 601 FFVGDKSHQETKDIYAKLKDISWRLKEEGYKPDTSPVLYDVNEEQKEKMLWDHSERLAIA 660

Query: 661 FALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDF 720
           FALLNTPPGTKIRITKNLRVCADCHTVTK ISKL DREIVMRDNHRFHHFIDGICSCGDF
Sbjct: 661 FALLNTPPGTKIRITKNLRVCADCHTVTKFISKLMDREIVMRDNHRFHHFIDGICSCGDF 720

[Close]

BLAST of Csor.00g280160 vs. ExPASy TrEMBL
Match: A0A6J1GMH0 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455614 PE=3 SV=1)

HSP 1 Score: 1439 bits (3725), Expect = 0.0
Identity = 708/720 (98.33%), Postives = 717/720 (99.58%), Query Frame = 0


Query: 1   MIAIATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQ 60
           MIAIATATLKPFILHNANICKKSLHTNTITNPKS+LRFPLTSLQCGAILQSLTNTKSTAQ
Sbjct: 1   MIAIATATLKPFILHNANICKKSLHTNTITNPKSALRFPLTSLQCGAILQSLTNTKSTAQ 60

Query: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120
           GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA
Sbjct: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120

Query: 121 SGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIY 180
           SGG+IAY+ALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHT VEVCGWDSD+Y
Sbjct: 121 SGGIIAYKALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTQVEVCGWDSDVY 180

Query: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAE 240
           VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTL+SGYVRNNNAMEALMIFYLMGKA 
Sbjct: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLISGYVRNNNAMEALMIFYLMGKAG 240

Query: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA 300
           LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA
Sbjct: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA 300

Query: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK 360
           RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK
Sbjct: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK 360

Query: 361 ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAM 420
           ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCS+H+FCEMTQKNMVAWSAM
Sbjct: 361 ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSHHIFCEMTQKNMVAWSAM 420

Query: 421 IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480
           IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD
Sbjct: 421 IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480

Query: 481 IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISA 540
           IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRN+VLAEISA
Sbjct: 481 IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNIVLAEISA 540

Query: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMF 600
           QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVR+TMRNYGLKKPAGYS IELDSQVHMF
Sbjct: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRTTMRNYGLKKPAGYSSIELDSQVHMF 600

Query: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660
           FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF
Sbjct: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660

Query: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720
           ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW
Sbjct: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720

[Close]

BLAST of Csor.00g280160 vs. ExPASy TrEMBL
Match: A0A6J1I1A3 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111468131 PE=3 SV=1)

HSP 1 Score: 1419 bits (3672), Expect = 0.0
Identity = 697/720 (96.81%), Postives = 711/720 (98.75%), Query Frame = 0


Query: 1   MIAIATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQ 60
           MIAIATATLKPFILHNANICKKSLHTNTITN KS+LR PLTSLQCGAILQSLTNTKS AQ
Sbjct: 1   MIAIATATLKPFILHNANICKKSLHTNTITNSKSALRIPLTSLQCGAILQSLTNTKSIAQ 60

Query: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120
           GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA
Sbjct: 61  GRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYA 120

Query: 121 SGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIY 180
           SGG+IAY+ALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHT VEVCGWDSDIY
Sbjct: 121 SGGIIAYKALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTQVEVCGWDSDIY 180

Query: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAE 240
           VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTL+SGYVRNNNAMEALMIFYLMGKA 
Sbjct: 181 VNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLISGYVRNNNAMEALMIFYLMGKAG 240

Query: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVA 300
           LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNC+SVAVA
Sbjct: 241 LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCSSVAVA 300

Query: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEK 360
           RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFC+MLIEETAAPDEITLVAVLGACEK
Sbjct: 301 RQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCRMLIEETAAPDEITLVAVLGACEK 360

Query: 361 ITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAM 420
           ITALQFGKSVHSYLTK GIF NS+LGTA+IDMYAKCGELSCS+H+FCEMTQKNMVAWSAM
Sbjct: 361 ITALQFGKSVHSYLTKMGIFFNSYLGTAIIDMYAKCGELSCSHHIFCEMTQKNMVAWSAM 420

Query: 421 IAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480
           I AYGIHGRGKEAIS+FNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD
Sbjct: 421 IVAYGIHGRGKEAISIFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYD 480

Query: 481 IKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISA 540
           IKPGPAHYLC+VDLLGRAGLLNEAYELVKRMEV+PSADIWAALLSACRLHRNVVLAEISA
Sbjct: 481 IKPGPAHYLCMVDLLGRAGLLNEAYELVKRMEVKPSADIWAALLSACRLHRNVVLAEISA 540

Query: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMF 600
           QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVR+TMRNYGLKKPAGYSLIELDSQVHMF
Sbjct: 541 QNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRTTMRNYGLKKPAGYSLIELDSQVHMF 600

Query: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660
           FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF
Sbjct: 601 FVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAF 660

Query: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720
           ALLNTPPGTKIRITKNLRVCADCHTVTKLISKL DREIVMRDNHRFHHFIDGICSCGDFW
Sbjct: 661 ALLNTPPGTKIRITKNLRVCADCHTVTKLISKLMDREIVMRDNHRFHHFIDGICSCGDFW 720

[Close]

BLAST of Csor.00g280160 vs. ExPASy TrEMBL
Match: A0A6J1C2U5 (pentatricopeptide repeat-containing protein At3g12770-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007757 PE=3 SV=1)

HSP 1 Score: 1260 bits (3260), Expect = 0.0
Identity = 614/718 (85.52%), Postives = 658/718 (91.64%), Query Frame = 0


Query: 4   IATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQGRK 63
           I TA LKPFI HN  I K+SL+T  I++P   LR PL SLQCGAILQSLTN KS+A+GRK
Sbjct: 2   IGTAALKPFIFHNLIIFKRSLNTTAISSPTPPLRVPLNSLQCGAILQSLTNKKSSAEGRK 61

Query: 64  LHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYASGG 123
           LH  MLTCGNLQ+N YL+SKLAAFYA CGRM+EAQVIFDGV LKNSFLWNFMIRGYAS G
Sbjct: 62  LHGYMLTCGNLQDNAYLNSKLAAFYAGCGRMVEAQVIFDGVVLKNSFLWNFMIRGYASDG 121

Query: 124 VIAYEALAMYRKMLRLGI-VDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIYVN 183
             AY+ALA+YRKM+ LG   DNFTFPFVLKACGDLGL+EMG++IH  VEVCGW+SDIYVN
Sbjct: 122 TNAYKALALYRKMVTLGFKADNFTFPFVLKACGDLGLTEMGKKIHGRVEVCGWESDIYVN 181

Query: 184 NSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAELK 243
           NSL+AMY+KFGN+  ARKVFDKMP+RD TSWNT++SGYVRNNNAM+ALMIFY MGKA  K
Sbjct: 182 NSLIAMYVKFGNMGDARKVFDKMPERDLTSWNTMISGYVRNNNAMDALMIFYRMGKAGSK 241

Query: 244 ADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVARQ 303
           ADGTTLLALLS C DLAAIKQGKEIHCYA+RNNY +SNEFLMNSLIDMYSNCNS A AR 
Sbjct: 242 ADGTTLLALLSVCADLAAIKQGKEIHCYAVRNNYFTSNEFLMNSLIDMYSNCNSTAGARL 301

Query: 304 LFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEKIT 363
           LFEELKIKDTVSWNSIIS YQ SGDAFESLRLFCQM +E TAAPDEIT+VAVLGACEKIT
Sbjct: 302 LFEELKIKDTVSWNSIISGYQLSGDAFESLRLFCQMFVERTAAPDEITIVAVLGACEKIT 361

Query: 364 ALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAMIA 423
           ALQFGKSVHSY  K G FLNSFLGTALIDMYAKCGELSCS+HVFCEMTQKNMVAWSA+IA
Sbjct: 362 ALQFGKSVHSYFAKIGFFLNSFLGTALIDMYAKCGELSCSHHVFCEMTQKNMVAWSALIA 421

Query: 424 AYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYDIK 483
           AYGIHGRGKEAIS+FN+MTANGI PDEG+LTSVLSACSHSGLV+EGKKIFNEMT KY++K
Sbjct: 422 AYGIHGRGKEAISIFNKMTANGIVPDEGILTSVLSACSHSGLVNEGKKIFNEMTDKYNVK 481

Query: 484 PGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISAQN 543
           PG AHYLCLVDL GRAGLLNE YEL+K MEVEP A+IWAALLSACRLHRNV LAEISAQN
Sbjct: 482 PGFAHYLCLVDLFGRAGLLNETYELIKHMEVEPPAEIWAALLSACRLHRNVELAEISAQN 541

Query: 544 IFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMFFV 603
           IFRTNPTRVSSYICLSNIYAA KQWT VEKVR+TMR +GLKKPAGYSLIELDSQVHMFFV
Sbjct: 542 IFRTNPTRVSSYICLSNIYAAKKQWTDVEKVRATMRRHGLKKPAGYSLIELDSQVHMFFV 601

Query: 604 GDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAFAL 663
           GD+SHQQTKDIYAKLKDISWRLKE+GHKPDTSS+LYDV+EEQKEKMLWDHSERLAIAFAL
Sbjct: 602 GDRSHQQTKDIYAKLKDISWRLKEEGHKPDTSSVLYDVDEEQKEKMLWDHSERLAIAFAL 661

Query: 664 LNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720
           LNTPPGTKIRITKNLRVCADCHTVTKLISKL DREI+MRDNHRFHHFIDGICSCGDFW
Sbjct: 662 LNTPPGTKIRITKNLRVCADCHTVTKLISKLMDREIIMRDNHRFHHFIDGICSCGDFW 719

[Close]

BLAST of Csor.00g280160 vs. ExPASy TrEMBL
Match: A0A6J1C2E2 (pentatricopeptide repeat-containing protein At3g12770-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007757 PE=3 SV=1)

HSP 1 Score: 1181 bits (3054), Expect = 0.0
Identity = 584/718 (81.34%), Postives = 625/718 (87.05%), Query Frame = 0


Query: 4   IATATLKPFILHNANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQGRK 63
           I TA LKPFI HN  I K+SL+T  I++P   LR PL SLQCGAILQSLTN KS+A+GRK
Sbjct: 2   IGTAALKPFIFHNLIIFKRSLNTTAISSPTPPLRVPLNSLQCGAILQSLTNKKSSAEGRK 61

Query: 64  LHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYASGG 123
           LH  MLTCGNLQ+N YL+SKLAAFYA CGRM+EAQVIFDGV LKNSFLWNFMIRGYAS G
Sbjct: 62  LHGYMLTCGNLQDNAYLNSKLAAFYAGCGRMVEAQVIFDGVVLKNSFLWNFMIRGYASDG 121

Query: 124 VIAYEALAMYRKMLRLGI-VDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIYVN 183
             AY+ALA+YRKM+ LG   DNFTFPFVLKACGDLGL+EMG++IH  VEVCGW+SDIYVN
Sbjct: 122 TNAYKALALYRKMVTLGFKADNFTFPFVLKACGDLGLTEMGKKIHGRVEVCGWESDIYVN 181

Query: 184 NSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAELK 243
           NSL+AMY+KFGN+  ARKVFDKMP+RD TSWNT++SGYVRNNNAM+ALMIFY MGKA  K
Sbjct: 182 NSLIAMYVKFGNMGDARKVFDKMPERDLTSWNTMISGYVRNNNAMDALMIFYRMGKAGSK 241

Query: 244 ADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVARQ 303
           ADGTTLLALLS C DLAAIKQGKEIHCYA+RNNY +SNEFLMNSLIDMYSNCNS A AR 
Sbjct: 242 ADGTTLLALLSVCADLAAIKQGKEIHCYAVRNNYFTSNEFLMNSLIDMYSNCNSTAGARL 301

Query: 304 LFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEKIT 363
           LFEELKIKDTVSWNSIIS YQ SGDAFESLRLFCQM +E TAAPDEIT+VAVLGACEKIT
Sbjct: 302 LFEELKIKDTVSWNSIISGYQLSGDAFESLRLFCQMFVERTAAPDEITIVAVLGACEKIT 361

Query: 364 ALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAMIA 423
           ALQFGKSVHSY  K G FLNSFLGTALIDMYAKCGELSCS+HVFCEMTQKNMVAWSA+IA
Sbjct: 362 ALQFGKSVHSYFAKIGFFLNSFLGTALIDMYAKCGELSCSHHVFCEMTQKNMVAWSALIA 421

Query: 424 AYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYDIK 483
           AYGIHGRGKEAIS+FN+MTANGI PDEG+LTSVLSACSHSGL                  
Sbjct: 422 AYGIHGRGKEAISIFNKMTANGIVPDEGILTSVLSACSHSGL------------------ 481

Query: 484 PGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISAQN 543
                             LNE YEL+K MEVEP A+IWAALLSACRLHRNV LAEISAQN
Sbjct: 482 ------------------LNETYELIKHMEVEPPAEIWAALLSACRLHRNVELAEISAQN 541

Query: 544 IFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMFFV 603
           IFRTNPTRVSSYICLSNIYAA KQWT VEKVR+TMR +GLKKPAGYSLIELDSQVHMFFV
Sbjct: 542 IFRTNPTRVSSYICLSNIYAAKKQWTDVEKVRATMRRHGLKKPAGYSLIELDSQVHMFFV 601

Query: 604 GDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAFAL 663
           GD+SHQQTKDIYAKLKDISWRLKE+GHKPDTSS+LYDV+EEQKEKMLWDHSERLAIAFAL
Sbjct: 602 GDRSHQQTKDIYAKLKDISWRLKEEGHKPDTSSVLYDVDEEQKEKMLWDHSERLAIAFAL 661

Query: 664 LNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720
           LNTPPGTKIRITKNLRVCADCHTVTKLISKL DREI+MRDNHRFHHFIDGICSCGDFW
Sbjct: 662 LNTPPGTKIRITKNLRVCADCHTVTKLISKLMDREIIMRDNHRFHHFIDGICSCGDFW 683

[Close]

BLAST of Csor.00g280160 vs. ExPASy TrEMBL
Match: A0A5E4G1W2 (PREDICTED: pentatricopeptide OS=Prunus dulcis OX=3755 GN=ALMOND_2B007928 PE=3 SV=1)

HSP 1 Score: 952 bits (2460), Expect = 0.0
Identity = 465/706 (65.86%), Postives = 566/706 (80.17%), Query Frame = 0


Query: 16  NANICKKSLHTNTITNPKSSLRFPLTSLQCGAILQSLTNTKSTAQGRKLHACMLTCGNLQ 75
           N  + KKSL T T+   +  L  PLTSLQCG ILQSLTNTKS  +G+KLHA M+T GNL 
Sbjct: 7   NLKLLKKSLCTTTVHFKEQPLSPPLTSLQCGKILQSLTNTKSFPKGQKLHALMVTSGNLL 66

Query: 76  NNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRGYASGGVIAYEALAMYRK 135
           NNTYLS+KLAAFYA CGRM +AQ+IFDG+ LKNSFLWNFMIRGYA     + +AL +YR+
Sbjct: 67  NNTYLSTKLAAFYANCGRMAQAQMIFDGILLKNSFLWNFMIRGYACNEC-SLKALVLYRE 126

Query: 136 MLRLGI-VDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIYVNNSLLAMYLKFGN 195
           ML  G   DNFT+PFVLKACGDL L E GR +H+ V V G +SDIYV N+LLAMY KFG+
Sbjct: 127 MLSFGQKADNFTYPFVLKACGDLLLGETGRRVHSEVVVSGLESDIYVANALLAMYSKFGD 186

Query: 196 LDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYLMGKAELKADGTTLLALLSA 255
           + +AR +FD+M +RD  SWNT++SGYV+NNN  +AL +F  MGKA LKADGTTLL +LSA
Sbjct: 187 MGLARMLFDRMLERDLISWNTMISGYVKNNNPRKALEVFEEMGKAGLKADGTTLLGILSA 246

Query: 256 CVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCNSVAVARQLFEELKIKDTVS 315
           C +L A+K GKEIH Y +R +    NEFL NSLI+MY NC S+A +R+LF+ +K+KDTVS
Sbjct: 247 CAELLALKLGKEIHAYVVRKSVEIHNEFLTNSLIEMYCNCKSLAYSRRLFDGVKLKDTVS 306

Query: 316 WNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVLGACEKITALQFGKSVHSYL 375
           WNS+I  Y+++GDAFESLRLFC+M++E  A  DE+T++ +LGAC++I ALQFG SVHS L
Sbjct: 307 WNSMIRGYEQNGDAFESLRLFCRMIMEG-AEVDEVTIITILGACDQINALQFGMSVHSCL 366

Query: 376 TKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMVAWSAMIAAYGIHGRGKEAI 435
            K G   N  +GTALIDMY+KCG LSCS  VF E+ +KN+VAWSAMI+ YG HGRG+EAI
Sbjct: 367 VKKGFGANIIVGTALIDMYSKCGSLSCSRRVFDEIPRKNLVAWSAMISGYGAHGRGEEAI 426

Query: 436 SVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEMTIKYDIKPGPAHYLCLVDL 495
           S ++E+ AN  +PDEGVLTSVLSACSH+GLV+EGK IFN MTI+Y++KPG AHY CLVDL
Sbjct: 427 SCYHELVANNFTPDEGVLTSVLSACSHAGLVNEGKHIFNRMTIEYNVKPGLAHYSCLVDL 486

Query: 496 LGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVLAEISAQNIFRTNPTRVSSY 555
           LGRAG ++EAYEL+K MEV+PS+DIWAA LSACRLH+NV LAE+SAQ +F  +P  V SY
Sbjct: 487 LGRAGHVDEAYELIKTMEVKPSSDIWAAFLSACRLHKNVKLAEVSAQKVFEMHPKGVGSY 546

Query: 556 ICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIY 615
           ICLSNIYA+ K+W  VE+VR+ +R+ GLKKP G S +E+D  VH F VGDKSH QT D+Y
Sbjct: 547 ICLSNIYASEKRWDDVERVRAMVRSKGLKKPPGCSFVEVDKMVHRFLVGDKSHPQTHDVY 606

Query: 616 AKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSERLAIAFALLNTPPGTKIRIT 675
           AKLK+++ RL E G+KPDT+S+ YDV EE KEKMLWDHSERLAIAFAL+NT PGT IRIT
Sbjct: 607 AKLKELNLRLTEAGYKPDTTSVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTTIRIT 666

Query: 676 KNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICSCGDFW 720
           KNLRVC DCHTVTK+IS+L +REI+MRD HRFHHF  G CSCGD+W
Sbjct: 667 KNLRVCDDCHTVTKMISELMNREIIMRDIHRFHHFRHGFCSCGDYW 710

[Close]

BLAST of Csor.00g280160 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 540.4 bits (1391), Expect = 2.2e-153
Identity = 296/743 (39.84%), Postives = 427/743 (57.47%), Query Frame = 0


Query: 24  LHTNTITNPKSSLRF---------PLTSLQCGAILQSLTNTKSTAQGRKLHACMLTCGNL 83
           L  + +T P SS  F         P  S++    L  L N K+    R +HA M+  G L
Sbjct: 3   LSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG-L 62

Query: 84  QNNTYLSSKLAAFYAACGR---MIEAQVIFDGVALKNSFLWNFMIRGYASGGVIAYEALA 143
            N  Y  SKL  F         +  A  +F  +   N  +WN M RG+A        AL 
Sbjct: 63  HNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSS-DPVSALK 122

Query: 144 MYRKMLRLGIVDN-FTFPFVLKACGDLGLSEMGREIHTHVEVCGWDSDIYVNNSLLAMYL 203
           +Y  M+ LG++ N +TFPFVLK+C      + G++IH HV   G D D+YV+ SL++MY+
Sbjct: 123 LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV 182

Query: 204 KFGNLDVARKVFDKMPDR-------------------------------DTTSWNTLLSG 263
           + G L+ A KVFDK P R                               D  SWN ++SG
Sbjct: 183 QNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG 242

Query: 264 YVRNNNAMEALMIFYLMGKAELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSS 323
           Y    N  EAL +F  M K  ++ D +T++ ++SAC    +I+ G+++H + I ++   S
Sbjct: 243 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW-IDDHGFGS 302

Query: 324 NEFLMNSLIDMYSNCNSVAVARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQML 383
           N  ++N+LID+YS C  +  A  LFE L  KD +SWN++I  Y       E+L LF +ML
Sbjct: 303 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 362

Query: 384 IEETAAPDEITLVAVLGACEKITALQFGKSVHSYLTK--TGIFLNSFLGTALIDMYAKCG 443
                 P+++T++++L AC  + A+  G+ +H Y+ K   G+   S L T+LIDMYAKCG
Sbjct: 363 -RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 422

Query: 444 ELSCSYHVFCEMTQKNMVAWSAMIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLS 503
           ++  ++ VF  +  K++ +W+AMI  + +HGR   +  +F+ M   GI PD+     +LS
Sbjct: 423 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 482

Query: 504 ACSHSGLVDEGKKIFNEMTIKYDIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSA 563
           ACSHSG++D G+ IF  MT  Y + P   HY C++DLLG +GL  EA E++  ME+EP  
Sbjct: 483 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 542

Query: 564 DIWAALLSACRLHRNVVLAEISAQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTM 623
            IW +LL AC++H NV L E  A+N+ +  P    SY+ LSNIYA+  +W  V K R+ +
Sbjct: 543 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 602

Query: 624 RNYGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSIL 683
            + G+KK  G S IE+DS VH F +GDK H + ++IY  L+++   L++ G  PDTS +L
Sbjct: 603 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVL 662

Query: 684 YDVNEEQKEKMLWDHSERLAIAFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDRE 721
            ++ EE KE  L  HSE+LAIAF L++T PGTK+ I KNLRVC +CH  TKLISK+  RE
Sbjct: 663 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKRE 722

[Close]

BLAST of Csor.00g280160 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 536.6 bits (1381), Expect = 3.1e-152
Identity = 279/665 (41.95%), Postives = 419/665 (63.01%), Query Frame = 0


Query: 59  AQGRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFMIRG 118
           AQ +++HA +L  G LQ + +L +KL    ++ G +  A+ +FD +     F WN +IRG
Sbjct: 35  AQLKQIHARLLVLG-LQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 94

Query: 119 YASGGVIAYEALAMYRKM-LRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGWDS 178
           Y+       +AL MY  M L     D+FTFP +LKAC  L   +MGR +H  V   G+D+
Sbjct: 95  YSRNNHF-QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 154

Query: 179 DIYVNNSLLAMYLKFGNLDVARKVFD--KMPDRDTTSWNTLLSGYVRNNNAMEALMIFYL 238
           D++V N L+A+Y K   L  AR VF+   +P+R   SW  ++S Y +N   MEAL IF  
Sbjct: 155 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 214

Query: 239 MGKAELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCN 298
           M K ++K D   L+++L+A   L  +KQG+ IH   ++       + L+ SL  MY+ C 
Sbjct: 215 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI-SLNTMYAKCG 274

Query: 299 SVAVARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVL 358
            VA A+ LF+++K  + + WN++IS Y ++G A E++ +F +M I +   PD I++ + +
Sbjct: 275 QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAI 334

Query: 359 GACEKITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMV 418
            AC ++ +L+  +S++ Y+ ++    + F+ +ALIDM+AKCG +  +  VF     +++V
Sbjct: 335 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 394

Query: 419 AWSAMIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEM 478
            WSAMI  YG+HGR +EAIS++  M   G+ P++     +L AC+HSG+V EG   FN M
Sbjct: 395 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 454

Query: 479 TIKYDIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVL 538
              + I P   HY C++DLLGRAG L++AYE++K M V+P   +W ALLSAC+ HR+V L
Sbjct: 455 A-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 514

Query: 539 AEISAQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDS 598
            E +AQ +F  +P+    Y+ LSN+YAA + W  V +VR  M+  GL K  G S +E+  
Sbjct: 515 GEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 574

Query: 599 QVHMFFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSER 658
           ++  F VGDKSH + ++I  +++ I  RLKE G   +  + L+D+N+E+ E+ L  HSER
Sbjct: 575 RLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSER 634

Query: 659 LAIAFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICS 718
           +AIA+ L++TP GT +RITKNLR C +CH  TKLISKL DREIV+RD +RFHHF DG+CS
Sbjct: 635 IAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCS 694

Query: 719 CGDFW 721
           CGD+W
Sbjct: 695 CGDYW 694

[Close]

BLAST of Csor.00g280160 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 515.0 bits (1325), Expect = 9.7e-146
Identity = 271/683 (39.68%), Postives = 417/683 (61.05%), Query Frame = 0


Query: 40  LTSLQCGAILQSLTNTKSTAQGRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQV 99
           + S     + +S ++ +S   G +LH  +L  G  + N+ + + L AFY    R+  A+ 
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS-VGNSLVAFYLKNQRVDSARK 252

Query: 100 IFDGVALKNSFLWNFMIRGYASGGVIAYEALAMYRKMLRLGI-VDNFTFPFVLKACGDLG 159
           +FD +  ++   WN +I GY S G +A + L+++ +ML  GI +D  T   V   C D  
Sbjct: 253 VFDEMTERDVISWNSIINGYVSNG-LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR 312

Query: 160 LSEMGREIHT-HVEVCGWDSDIYVNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLL 219
           L  +GR +H+  V+ C    D +  N+LL MY K G+LD A+ VF +M DR   S+ +++
Sbjct: 313 LISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 372

Query: 220 SGYVRNNNAMEALMIFYLMGKAELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYV 279
           +GY R   A EA+ +F  M +  +  D  T+ A+L+ C     + +GK +H + I+ N +
Sbjct: 373 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDL 432

Query: 280 SSNEFLMNSLIDMYSNCNSVAVARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQ 339
             + F+ N+L+DMY+ C S+  A  +F E+++KD +SWN+II  Y ++  A E+L LF  
Sbjct: 433 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 492

Query: 340 MLIEETAAPDEITLVAVLGACEKITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCG 399
           +L E+  +PDE T+  VL AC  ++A   G+ +H Y+ + G F +  +  +L+DMYAKCG
Sbjct: 493 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 552

Query: 400 ELSCSYHVFCEMTQKNMVAWSAMIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLS 459
            L  ++ +F ++  K++V+W+ MIA YG+HG GKEAI++FN+M   GI  DE    S+L 
Sbjct: 553 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLY 612

Query: 460 ACSHSGLVDEGKKIFNEMTIKYDIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSA 519
           ACSHSGLVDEG + FN M  +  I+P   HY C+VD+L R G L +AY  ++ M + P A
Sbjct: 613 ACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDA 672

Query: 520 DIWAALLSACRLHRNVVLAEISAQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTM 579
            IW ALL  CR+H +V LAE  A+ +F   P     Y+ ++NIYA  ++W  V+++R  +
Sbjct: 673 TIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRI 732

Query: 580 RNYGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSIL 639
              GL+K  G S IE+  +V++F  GD S+ +T++I A L+ +  R+ E+G+ P T   L
Sbjct: 733 GQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYAL 792

Query: 640 YDVNEEQKEKMLWDHSERLAIAFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDRE 699
            D  E +KE+ L  HSE+LA+A  ++++  G  IR+TKNLRVC DCH + K +SKLT RE
Sbjct: 793 IDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRRE 852

Query: 700 IVMRDNHRFHHFIDGICSCGDFW 721
           IV+RD++RFH F DG CSC  FW
Sbjct: 853 IVLRDSNRFHQFKDGHCSCRGFW 871

[Close]

BLAST of Csor.00g280160 vs. TAIR 10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 511.9 bits (1317), Expect = 8.2e-145
Identity = 260/665 (39.10%), Postives = 408/665 (61.35%), Query Frame = 0


Query: 56  KSTAQGRKLHACMLTCGNLQNNTYLSSKLAAFYAACGRMIEAQVIFDGVALKNSFLWNFM 115
           ++   G K+H   L  G +  + Y+++ L   Y+    +  A+++FD + +++   WN M
Sbjct: 164 RTVIDGNKIHCLALKFGFMW-DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAM 223

Query: 116 IRGYASGGVIAYEALAMYRKMLRLGIVDNFTFPFVLKACGDLGLSEMGREIHTHVEVCGW 175
           I GY   G  A EAL +      L  +D+ T   +L AC + G    G  IH++    G 
Sbjct: 224 ISGYCQSG-NAKEALTLSN---GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 283

Query: 176 DSDIYVNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAMEALMIFYL 235
           +S+++V+N L+ +Y +FG L   +KVFD+M  RD  SWN+++  Y  N   + A+ +F  
Sbjct: 284 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 343

Query: 236 MGKAELKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEFLMNSLIDMYSNCN 295
           M  + ++ D  TL++L S    L  I+  + +  + +R  +   +  + N+++ MY+   
Sbjct: 344 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 403

Query: 296 SVAVARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLIEETAAPDEITLVAVL 355
            V  AR +F  L   D +SWN+IIS Y ++G A E++ ++  M  E   A ++ T V+VL
Sbjct: 404 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 463

Query: 356 GACEKITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELSCSYHVFCEMTQKNMV 415
            AC +  AL+ G  +H  L K G++L+ F+ T+L DMY KCG L  +  +F ++ + N V
Sbjct: 464 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 523

Query: 416 AWSAMIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACSHSGLVDEGKKIFNEM 475
            W+ +IA +G HG G++A+ +F EM   G+ PD     ++LSACSHSGLVDEG+  F  M
Sbjct: 524 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 583

Query: 476 TIKYDIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIWAALLSACRLHRNVVL 535
              Y I P   HY C+VD+ GRAG L  A + +K M ++P A IW ALLSACR+H NV L
Sbjct: 584 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDL 643

Query: 536 AEISAQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNYGLKKPAGYSLIELDS 595
            +I+++++F   P  V  ++ LSN+YA+  +W  V+++RS     GL+K  G+S +E+D+
Sbjct: 644 GKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDN 703

Query: 596 QVHMFFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDVNEEQKEKMLWDHSER 655
           +V +F+ G+++H   +++Y +L  +  +LK  G+ PD   +L DV +++KE +L  HSER
Sbjct: 704 KVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSER 763

Query: 656 LAIAFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVMRDNHRFHHFIDGICS 715
           LAIAFAL+ TP  T IRI KNLRVC DCH+VTK ISK+T+REI++RD++RFHHF +G+CS
Sbjct: 764 LAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCS 823

Query: 716 CGDFW 721
           CGD+W
Sbjct: 824 CGDYW 823

[Close]

BLAST of Csor.00g280160 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 504.6 bits (1298), Expect = 1.3e-142
Identity = 261/620 (42.10%), Postives = 397/620 (64.03%), Query Frame = 0


Query: 110 FLWNFMIRGYASGGVIAYEALAMYRKMLRLGIV-DNFTFPFVLKACGDLGLSEMGREIHT 169
           F WN +I   A  G  A EAL  +  M +L +     +FP  +KAC  L     G++ H 
Sbjct: 42  FSWNSVIADLARSGDSA-EALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 101

Query: 170 HVEVCGWDSDIYVNNSLLAMYLKFGNLDVARKVFDKMPDRDTTSWNTLLSGYVRNNNAME 229
              V G+ SDI+V+++L+ MY   G L+ ARKVFD++P R+  SW +++ GY  N NA++
Sbjct: 102 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 161

Query: 230 ALMIF--YLMGKAE----LKADGTTLLALLSACVDLAAIKQGKEIHCYAIRNNYVSSNEF 289
           A+ +F   L+ + +    +  D   L++++SAC  + A    + IH + I+  +      
Sbjct: 162 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF-DRGVS 221

Query: 290 LMNSLIDMYSNC--NSVAVARQLFEELKIKDTVSWNSIISCYQRSGDAFESLRLFCQMLI 349
           + N+L+D Y+      VAVAR++F+++  KD VS+NSI+S Y +SG + E+  +F +++ 
Sbjct: 222 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 281

Query: 350 EETAAPDEITLVAVLGACEKITALQFGKSVHSYLTKTGIFLNSFLGTALIDMYAKCGELS 409
            +    + ITL  VL A     AL+ GK +H  + + G+  +  +GT++IDMY KCG + 
Sbjct: 282 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 341

Query: 410 CSYHVFCEMTQKNMVAWSAMIAAYGIHGRGKEAISVFNEMTANGISPDEGVLTSVLSACS 469
            +   F  M  KN+ +W+AMIA YG+HG   +A+ +F  M  +G+ P+     SVL+ACS
Sbjct: 342 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 401

Query: 470 HSGLVDEGKKIFNEMTIKYDIKPGPAHYLCLVDLLGRAGLLNEAYELVKRMEVEPSADIW 529
           H+GL  EG + FN M  ++ ++PG  HY C+VDLLGRAG L +AY+L++RM+++P + IW
Sbjct: 402 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 461

Query: 530 AALLSACRLHRNVVLAEISAQNIFRTNPTRVSSYICLSNIYAAMKQWTAVEKVRSTMRNY 589
           ++LL+ACR+H+NV LAEIS   +F  + +    Y+ LS+IYA   +W  VE+VR  M+N 
Sbjct: 462 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 521

Query: 590 GLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISWRLKEKGHKPDTSSILYDV 649
           GL KP G+SL+EL+ +VH+F +GD+ H Q + IY  L +++ +L E G+  +TSS+ +DV
Sbjct: 522 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDV 581

Query: 650 NEEQKEKMLWDHSERLAIAFALLNTPPGTKIRITKNLRVCADCHTVTKLISKLTDREIVM 709
           +EE+KE  L  HSE+LAIAF ++NT PG+ + + KNLRVC+DCH V KLISK+ DRE V+
Sbjct: 582 DEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVV 641

Query: 710 RDNHRFHHFIDGICSCGDFW 721
           RD  RFHHF DG CSCGD+W
Sbjct: 642 RDAKRFHHFKDGGCSCGDYW 659

The following BLAST results are available for this feature:

BLAST of Csor.00g280160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN01	3.0e-152	39.84	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9LTV8	4.4e-151	41.95	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]
Q9SN39	1.4e-144	39.68	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q9M1V3	5.2e-144	39.43	Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop...	[more]
O81767	1.2e-143	39.10	Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX...	[more]

BLAST of Csor.00g280160 vs. NCBI nr


Match Name	Identity	Description
KAG6572313.1	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022953113.1	98.33	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [C...	[more]
XP_023554404.1	97.36	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [C...	[more]
XP_022968999.1	96.81	pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucur...	[more]
XP_038887372.1	88.07	pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benin...	[more]

BLAST of Csor.00g280160 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1GMH0	98.33	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS...	[more]
A0A6J1I1A3	96.81	pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cuc...	[more]
A0A6J1C2U5	85.52	pentatricopeptide repeat-containing protein At3g12770-like isoform X1 OS=Momordi...	[more]
A0A6J1C2E2	81.34	pentatricopeptide repeat-containing protein At3g12770-like isoform X2 OS=Momordi...	[more]
A0A5E4G1W2	65.86	PREDICTED: pentatricopeptide OS=Prunus dulcis OX=3755 GN=ALMOND_2B007928 PE=3 SV...	[more]

BLAST of Csor.00g280160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08070.1	2.2e-153	39.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G12770.1	3.1e-152	41.95	mitochondrial editing factor 22	[more]
AT4G18750.1	9.7e-146	39.68	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G33990.1	8.2e-145	39.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G26782.1	1.3e-142	42.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 34..144 e-value: 9.0E-6 score: 27.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 365..464 e-value: 3.7E-21 score: 77.3 coord: 265..364 e-value: 8.8E-17 score: 63.0 coord: 150..264 e-value: 6.9E-20 score: 73.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 465..658 e-value: 3.1E-13 score: 51.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 186..568
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 587..709 e-value: 3.9E-43 score: 146.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 453..483 e-value: 4.7E-4 score: 18.1 coord: 313..339 e-value: 4.6E-4 score: 18.2 coord: 212..243 e-value: 7.7E-5 score: 20.6 coord: 415..449 e-value: 4.3E-8 score: 30.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 488..512 e-value: 0.019 score: 15.2 coord: 284..308 e-value: 0.73 score: 10.2 coord: 313..339 e-value: 1.2E-4 score: 22.1 coord: 183..208 e-value: 0.015 score: 15.5 coord: 212..238 e-value: 5.8E-5 score: 23.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 412..459 e-value: 1.1E-8 score: 35.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 108..143 score: 9.97484
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 413..447 score: 11.8273
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 311..346 score: 9.602157
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 178..208 score: 8.61564
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 209..243 score: 9.667924
None	No IPR available	PANTHER	PTHR47928:SF41	SUBFAMILY NOT NAMED	coord: 55..120 coord: 126..694
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 126..694
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 55..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g280160.m01	Csor.00g280160.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding