Csor.00g279960 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g279960
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr19: 10382442 .. 10382702 (-)
RNA-Seq ExpressionCsor.00g279960
SyntenyCsor.00g279960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGAATATTCTCTCACTGACGTGGACAACACGACACCGTTGCGGGACGGTGTAAACATTCAGTCCGAAGTCGAAGCCGAGCTCCAAATGGAAGAAACACGGCAAACGAGAACGGAGGTCAATGAATCAAATGGAACTTCAACTCAAGGTCAAAATCGCTCTATTTTGTTGCATCTTTCGCAGCGCTTACGATTTTATTTACTGTCGGACGGCGCAGGGAGCGAAGGAGCGTTCGTAGTTCGTGTTATTTACGAGTGA

mRNA sequence

ATGCGAGAATATTCTCTCACTGACGTGGACAACACGACACCGTTGCGGGACGGTGTAAACATTCAGTCCGAAGTCGAAGCCGAGCTCCAAATGGAAGAAACACGGCAAACGAGAACGGAGGTCAATGAATCAAATGGAACTTCAACTCAAGGTCAAAATCGCTCTATTTTGTTGCATCTTTCGCAGCGCTTACGATTTTATTTACTGTCGGACGGCGCAGGGAGCGAAGGAGCGTTCGTAGTTCGTGTTATTTACGAGTGA

Coding sequence (CDS)

ATGCGAGAATATTCTCTCACTGACGTGGACAACACGACACCGTTGCGGGACGGTGTAAACATTCAGTCCGAAGTCGAAGCCGAGCTCCAAATGGAAGAAACACGGCAAACGAGAACGGAGGTCAATGAATCAAATGGAACTTCAACTCAAGGTCAAAATCGCTCTATTTTGTTGCATCTTTCGCAGCGCTTACGATTTTATTTACTGTCGGACGGCGCAGGGAGCGAAGGAGCGTTCGTAGTTCGTGTTATTTACGAGTGA

Protein sequence

MREYSLTDVDNTTPLRDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLHLSQRLRFYLLSDGAGSEGAFVVRVIYE
Homology
[Close]
BLAST of Csor.00g279960 vs. NCBI nr
Match: KAG6572293.1 (hypothetical protein SDJN03_29021, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165 bits (418), Expect = 2.82e-51
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MREYSLTDVDNTTPLRDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLHL 60
          MREYSLTDVDNTTPLRDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLHL
Sbjct: 1  MREYSLTDVDNTTPLRDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLHL 60

Query: 61 SQRLRFYLLSDGAGSEGAFVVRVIYE 86
          SQRLRFYLLSDGAGSEGAFVVRVIYE
Sbjct: 61 SQRLRFYLLSDGAGSEGAFVVRVIYE 86

[Close]
BLAST of Csor.00g279960 vs. NCBI nr
Match: XP_022952538.1 (uncharacterized protein LOC111455200 isoform X2 [Cucurbita moschata])

HSP 1 Score: 159 bits (402), Expect = 8.76e-48
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 1   MREYSLTDVDNTTPLRDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLHL 60
           MREYSLTDVDNTTPL+DGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILL L
Sbjct: 30  MREYSLTDVDNTTPLQDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLRL 89

Query: 61  SQRLRFYLLSDGAGSEGAFVVRVIYE 86
           SQRL+FYLLSDGAGSEGAFVVRVIYE
Sbjct: 90  SQRLQFYLLSDGAGSEGAFVVRVIYE 115

[Close]
BLAST of Csor.00g279960 vs. NCBI nr
Match: XP_022952537.1 (uncharacterized protein LOC111455200 isoform X1 [Cucurbita moschata])

HSP 1 Score: 159 bits (402), Expect = 1.19e-47
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 1   MREYSLTDVDNTTPLRDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLHL 60
           MREYSLTDVDNTTPL+DGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILL L
Sbjct: 30  MREYSLTDVDNTTPLQDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLRL 89

Query: 61  SQRLRFYLLSDGAGSEGAFVVRVIYE 86
           SQRL+FYLLSDGAGSEGAFVVRVIYE
Sbjct: 90  SQRLQFYLLSDGAGSEGAFVVRVIYE 115

[Close]
BLAST of Csor.00g279960 vs. ExPASy TrEMBL
Match: A0A6J1GKW6 (uncharacterized protein LOC111455200 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455200 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 4.24e-48
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 1   MREYSLTDVDNTTPLRDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLHL 60
           MREYSLTDVDNTTPL+DGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILL L
Sbjct: 30  MREYSLTDVDNTTPLQDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLRL 89

Query: 61  SQRLRFYLLSDGAGSEGAFVVRVIYE 86
           SQRL+FYLLSDGAGSEGAFVVRVIYE
Sbjct: 90  SQRLQFYLLSDGAGSEGAFVVRVIYE 115

[Close]
BLAST of Csor.00g279960 vs. ExPASy TrEMBL
Match: A0A6J1GKP2 (uncharacterized protein LOC111455200 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455200 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 5.77e-48
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 1   MREYSLTDVDNTTPLRDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLHL 60
           MREYSLTDVDNTTPL+DGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILL L
Sbjct: 30  MREYSLTDVDNTTPLQDGVNIQSEVEAELQMEETRQTRTEVNESNGTSTQGQNRSILLRL 89

Query: 61  SQRLRFYLLSDGAGSEGAFVVRVIYE 86
           SQRL+FYLLSDGAGSEGAFVVRVIYE
Sbjct: 90  SQRLQFYLLSDGAGSEGAFVVRVIYE 115

The following BLAST results are available for this feature:
BLAST of Csor.00g279960 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g279960 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6572293.12.82e-51100.00hypothetical protein SDJN03_29021, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022952538.18.76e-4896.51uncharacterized protein LOC111455200 isoform X2 [Cucurbita moschata][more]
XP_022952537.11.19e-4796.51uncharacterized protein LOC111455200 isoform X1 [Cucurbita moschata][more]
BLAST of Csor.00g279960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GKW64.24e-4896.51uncharacterized protein LOC111455200 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GKP25.77e-4896.51uncharacterized protein LOC111455200 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of Csor.00g279960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g279960.m01Csor.00g279960.m01mRNA