Csor.00g279620 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g279620
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Location	Csor_Chr19: 10220557 .. 10222104 (-)
RNA-Seq Expression	Csor.00g279620
Synteny	Csor.00g279620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTTTGCCGCCAGGGCCATTTCCCGATCCTCCTTCGGCAAGGCTGCGACTCTTCTGAGCGTCGGATCCAGAGCAGCTCCGGCTCGTTCATCATTTCGCATTGCTGCTAAACGACCTTTCTCTCAGTGTGCTGTAAGGTAAATTCCTCACAAGCATTCGATTTCGACGAAACGTGCTCGATGTAAATTAATTATGAAAACTCTGTGAGTTGAGTTATGATGCGTAGACAAATATGCTGAGTTGTTCCATATGTTGTGATGTTTTTCTTTTTCTCTTTTTCTATTTAGGCTTCCAGTTGAAATTAGCTGCTGTGTGGAGTCCATGCTTCCCTTCCATTCTGCTACTTCTTCGGCATTAATGACTTCGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGGTACTTTCTGTCTCTTCTAATTCTTCTAGTAGTTTCTATGGATGGGACTAAGTTATGAGCCAAGAGTTGTTGCCTCCCTGTTCTGCATCTACACTAGAGTGAATTTTACTTTTTCCAATGTTCTCGTTGTACGATATTTGATGAAAAGTTGCAAGAAACCAAACTCTATATAACAAGCCTAACAGGGAGGGTAATTATAAGGGAAGAACAAAGAGGTTAGGATTTATAATTCGTTCCATCACGATTTGAACTGTTTGAAATAAGAAATAGACAATAATTCTCCAAATAGTCTCAAACTAGTTCAAACCAATACCAGTGTTTTGGGTCAAATATATTTCCCTACTGCTTTTATAATCTCAAATGCTCTTTCAGCTTGGTAGAGCAATGTCTTATCTGGCCCCTTCTTTCTCACTACTTTTTTTCGGATCAATGAATTGAGAATTCAGTCCATCGTCCAAAGATAGAGATTAAATGCTGTATTCTGGATTAGGGTCTTCTAACTTCTTCAAAGCTAAAAAATACAGTTCGTTGTTTGTAACGAATCATTTCCCTCCTGCTGTGACGTGTGATTTAGCTGTTTATATGTGATGCTTGTATGTTACTCAATCACAACGATTTCATCCACGTACTTGATATTAAATGTGAGGATACTAATTATAACGTTTAACCAGTGTTCAATGATGATGTGTGATGATGAATTGTCAAAGAGGCAGAAAGTCTTGTTTGCAGAGTTCTACATTGTGACAGTGCCCGCTGCTAAAATACTCGTGCTGATCTGCAGGAATTTGGTTTTCCATGGCTCGAATCTCGGTCTAGCAAGCATGTCTTAGATTCTAAATTTGTGCAACTACGGACTACTAGAATGTATAGGAAGAGATACACATTAGACAGGAAGGCTTCAATAAATTGTCTCGTTATGTTTTAACTCCTTAAAGGATTGTCTTGCAATTATGAAATAGAAAATCTTACCAAGATAAGAGGAAGGATTCTTCGGCTAGCAGTCTTTATATATCTATTATATTACTCTATCATGGATGCTTATCAAACTTCATGACCTCTATTAATAGATGTATCGCACAATGTTAACGCCATTTAATATCTATTTGGCAGTGACTGGCTTGCAAACTTCATGA

mRNA sequence

ATGGCTTCCTTTGCCGCCAGGGCCATTTCCCGATCCTCCTTCGGCAAGGCTGCGACTCTTCTGAGCGTCGGATCCAGAGCAGCTCCGGCTCGTTCATCATTTCGCATTGCTGCTAAACGACCTTTCTCTCAGTGTGCTGTAAGGCTTCCAGTTGAAATTAGCTGCTGTGTGGAGTCCATGCTTCCCTTCCATTCTGCTACTTCTTCGGCATTAATGACTTCGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGTGACTGGCTTGCAAACTTCATGA

Coding sequence (CDS)

ATGGCTTCCTTTGCCGCCAGGGCCATTTCCCGATCCTCCTTCGGCAAGGCTGCGACTCTTCTGAGCGTCGGATCCAGAGCAGCTCCGGCTCGTTCATCATTTCGCATTGCTGCTAAACGACCTTTCTCTCAGTGTGCTGTAAGGCTTCCAGTTGAAATTAGCTGCTGTGTGGAGTCCATGCTTCCCTTCCATTCTGCTACTTCTTCGGCATTAATGACTTCGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGTGACTGGCTTGCAAACTTCATGA

Protein sequence

MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS

Homology

[Close]

BLAST of Csor.00g279620 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-10
Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 6  ARAISRSSFGKAATLLSVGSRAAPARSS---FRIAAKRPFSQCAVRLPVEISCCVESMLP 65
          AR++ R++  ++A   S G  A+ A+S+   FR  A+R      +R PVE+S CVES+LP
Sbjct: 10 ARSMLRAASSRSAA-ASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESLLP 69

Query: 66 FHSATSSALMTSMLSVSRHSYGWLSE 89
          +HSAT+SALMTS LS+S  +YGWLS+
Sbjct: 70 YHSATASALMTSKLSISGQTYGWLSD 94

[Close]

BLAST of Csor.00g279620 vs. NCBI nr
Match: KAG6572259.1 (Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011888.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 175 bits (443), Expect = 8.26e-55
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60
          MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM
Sbjct: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95
          LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Sbjct: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95

[Close]

BLAST of Csor.00g279620 vs. NCBI nr
Match: XP_022952574.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 174 bits (440), Expect = 2.37e-54
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60
          MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVE+SCCVESM
Sbjct: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95
          LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Sbjct: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95

[Close]

BLAST of Csor.00g279620 vs. NCBI nr
Match: XP_022969309.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 167 bits (423), Expect = 9.30e-52
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60
          MASFAARAISRSSFG+AATLLSVGSRAAPARSSFRIA+KRPFSQCAVRLPVE+S CVESM
Sbjct: 1  MASFAARAISRSSFGRAATLLSVGSRAAPARSSFRIASKRPFSQCAVRLPVEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95
          LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Sbjct: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95

[Close]

BLAST of Csor.00g279620 vs. NCBI nr
Match: XP_023554650.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163 bits (412), Expect = 4.43e-50
Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60
          MASFAARAISRSSFGKAATLLSVG+RAAPARS FRIA+KRP SQCAVRLPVE+S CVESM
Sbjct: 1  MASFAARAISRSSFGKAATLLSVGARAAPARSPFRIASKRPISQCAVRLPVEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95
          LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Sbjct: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95

[Close]

BLAST of Csor.00g279620 vs. NCBI nr
Match: XP_022952575.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 162 bits (411), Expect = 6.10e-50
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60
          MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVE+SCCVESM
Sbjct: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEV 89
          LPFHSATSSALMTSMLSVSRHSYGWLSEV
Sbjct: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEV 89

[Close]

BLAST of Csor.00g279620 vs. ExPASy TrEMBL
Match: A0A6J1GM36 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455225 PE=4 SV=1)

HSP 1 Score: 174 bits (440), Expect = 1.15e-54
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60
          MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVE+SCCVESM
Sbjct: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95
          LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Sbjct: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95

[Close]

BLAST of Csor.00g279620 vs. ExPASy TrEMBL
Match: A0A6J1I278 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468354 PE=4 SV=1)

HSP 1 Score: 167 bits (423), Expect = 4.50e-52
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60
          MASFAARAISRSSFG+AATLLSVGSRAAPARSSFRIA+KRPFSQCAVRLPVE+S CVESM
Sbjct: 1  MASFAARAISRSSFGRAATLLSVGSRAAPARSSFRIASKRPFSQCAVRLPVEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95
          LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Sbjct: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95

[Close]

BLAST of Csor.00g279620 vs. ExPASy TrEMBL
Match: A0A6J1GM60 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455225 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 2.95e-50
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60
          MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVE+SCCVESM
Sbjct: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEV 89
          LPFHSATSSALMTSMLSVSRHSYGWLSEV
Sbjct: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEV 89

[Close]

BLAST of Csor.00g279620 vs. ExPASy TrEMBL
Match: A0A6J1HZK6 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468354 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 1.16e-47
Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60
          MASFAARAISRSSFG+AATLLSVGSRAAPARSSFRIA+KRPFSQCAVRLPVE+S CVESM
Sbjct: 1  MASFAARAISRSSFGRAATLLSVGSRAAPARSSFRIASKRPFSQCAVRLPVEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEV 89
          LPFHSATSSALMTSMLSVSRHSYGWLSEV
Sbjct: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEV 89

[Close]

BLAST of Csor.00g279620 vs. ExPASy TrEMBL
Match: A0A1S3CB40 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498488 PE=4 SV=1)

HSP 1 Score: 142 bits (359), Expect = 2.59e-42
Identity = 78/95 (82.11%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESM 60
          MASFAARAI RSS GK ATLLS G+RAAPARS FRIA+KRPFS  + R+P+E+S CVESM
Sbjct: 1  MASFAARAIFRSSSGKTATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS 95
          LPFHSATSSALMTSMLSVS HSYGWLSEV+GLQTS
Sbjct: 61 LPFHSATSSALMTSMLSVSPHSYGWLSEVSGLQTS 95

[Close]

BLAST of Csor.00g279620 vs. TAIR 10
Match: AT2G33847.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.4); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 5  AARAISRSSFGKA--ATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLP 64
          AAR++ RS  G+A  A L S     + ARSSF++  + P S    R PVE+SCCVE+MLP
Sbjct: 3  AARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLP 62

Query: 65 FHSATSSALMTSMLSVSRHS 83
          +H+AT+SAL+ SMLSVS  S
Sbjct: 63 YHTATASALLNSMLSVSGRS 82

[Close]

BLAST of Csor.00g279620 vs. TAIR 10
Match: AT2G33847.2 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.3); Has 71 Blast hits to 71 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 5  AARAISRSSFGKA--ATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLP 64
          AAR++ RS  G+A  A L S     + ARSSF++  + P S    R PVE+SCCVE+MLP
Sbjct: 3  AARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLP 62

Query: 65 FHSATSSALMTSMLSVSRHS 83
          +H+AT+SAL+ SMLSVS  S
Sbjct: 63 YHTATASALLNSMLSVSGRS 82

[Close]

BLAST of Csor.00g279620 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 7.1e-12
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 5  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEISCCVES 64
          AAR++ RS+  +A++     S G +  P  AR++FR+  + P +    R PVE+SCCVE+
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVET 62

Query: 65 MLPFHSATSSALMTSMLSVSRHSYGWL 87
          MLP+H+AT+SAL+ SMLSVSR   GW+
Sbjct: 63 MLPYHTATASALLNSMLSVSRR--GWI 87

[Close]

BLAST of Csor.00g279620 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 7.1e-12
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 5  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEISCCVES 64
          AAR++ RS+  +A++     S G +  P  AR++FR+  + P +    R PVE+SCCVE+
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVET 62

Query: 65 MLPFHSATSSALMTSMLSVSRHSYGWL 87
          MLP+H+AT+SAL+ SMLSVSR   GW+
Sbjct: 63 MLPYHTATASALLNSMLSVSRR--GWI 87

[Close]

BLAST of Csor.00g279620 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 7.1e-12
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 5  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEISCCVES 64
          AAR++ RS+  +A++     S G +  P  AR++FR+  + P +    R PVE+SCCVE+
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVET 62

Query: 65 MLPFHSATSSALMTSMLSVSRHSYGWL 87
          MLP+H+AT+SAL+ SMLSVSR   GW+
Sbjct: 63 MLPYHTATASALLNSMLSVSRR--GWI 87

The following BLAST results are available for this feature:

BLAST of Csor.00g279620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZJ3	2.2e-10	48.84	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Csor.00g279620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572259.1	8.26e-55	100.00	Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurb...	[more]
XP_022952574.1	2.37e-54	98.95	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
XP_022969309.1	9.30e-52	95.79	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
XP_023554650.1	4.43e-50	93.68	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
XP_022952575.1	6.10e-50	98.88	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]

BLAST of Csor.00g279620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GM36	1.15e-54	98.95	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
A0A6J1I278	4.50e-52	95.79	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
A0A6J1GM60	2.95e-50	98.88	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
A0A6J1HZK6	1.16e-47	95.51	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
A0A1S3CB40	2.59e-42	82.11	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]

BLAST of Csor.00g279620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33847.1	1.9e-12	52.50	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]
AT2G33847.2	1.9e-12	52.50	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]
AT1G28395.2	7.1e-12	47.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.1	7.1e-12	47.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.3	7.1e-12	47.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 3..88
IPR033251	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial	PANTHER	PTHR33156:SF48	PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 3..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g279620.m01	Csor.00g279620.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000741	karyogamy
cellular_component	GO:0016021	integral component of membrane