Csor.00g279330 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g279330
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transmembrane protein 256 homolog
Location	Csor_Chr19: 10117400 .. 10120000 (+)
RNA-Seq Expression	Csor.00g279330
Synteny	Csor.00g279330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCGATATGTCGGCTGCGGACTGAAAGCAAGGAGAGCGACAGGTCGTTCTAATTTCAAACCATCGTCATCATATGTGGAAATAAAAAAGGGGAAATTAAAAAGCCCTTCACACAAAACTCTTCTTGAAGTCATTCCATTTCAAGCCCAGAAAGCAAAGAACAAGATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGTAATATCACCCCCGATTCTCCTGCTGTAGATTCTTGATTTGGATTTTGATTCGATTTCGGCGTTAAACAGGCGCTGCAGCTCTTGGATTGGGCACGTACGGTGCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTGATTTGCTTCATTTTTCGCTACTTTGATTCGATTTGATTTTGATTGATTTTGATTGTTTTTCTCTGAAATCAATGCTGTGAAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTGTAAGTTTTCCCCCCTTTTTTCATTCCTCGTGTTTGCAGCATCGTTTCTGGATGTAAATTTTCTCCTTCTGATCATTTTGGGCAAAACTTATTGATATCCAAACTTTTATCAAACGATTATTCAACTCGACCTAGCCTGAAATCAAAGCACTAGATGTTGTGTTTGAATGTTTTGAATCCATCCAGATCTTTTTTCTTTCCCTGGTATAAATTCTTCACATGTTAGGTGGATTCAGCTATAACATTCAAGCCCACAAATAAAACTTGCCATATGTGTATACCCAAACTGTCTCGTTTTATTACCATTTGCTATTTTGTTTTTGGAAATTGTGCTTATTTTCTCCAATTTCTTTACGAGGTCTTCATCTTTGCTAATTAAACACTTTAAATCTTAGTCAAATTCCAAATATAAAAACAAGTTTTTACACTATTTTGTGGATTTTAAGAACATATGGCAAAATAAAGCAACTCATAGGTAGAAATTTTATAAACTCACTTTATAAAACTTAAATGGTTACGAAGTAAGACCTGAACTTTTAGTTTTTAGATTTTGCATTGATTTGATGGAAATTAATATTTAAGCTTATCTACAAGTCTAGCTTCTTCCCATCTCTATACATATATATATATATATATATATATATATATATATATATATATATATATATTATATATATATATATATATAAAAAGGGAATGAGAAAGGAGTTCGATAAAAAAGAGTTTGGGAATGTCCCGCTTAGTTAACAAACATCGAGTTTGGAGTCGGGGCAGTATGGATACGAGACGATGGAAGTTCTGTTTGGAATCATTGTGGTTTTCTATCTTCATCTTACCAAATTGGAGAATAACCAAGGCCTTTCAGCGATTTGACACGCCCCCATAAGCTAGACGCTTCACCTACCTGACCTCAGAGAGAATAGAATGAGTTGCCTTAGCCCTAGTCTGACTAAGAGTTTGAATTGCTCTGTAGTCTCGTAGGGCGAATGAATTGCATTAGTGCGATTTGGCTAGCTGAATCGTCCCGCGAACAAATTGCGTCCTTGCTATCTTCAAAAAGAAATATATATATATATATATATATATATATATATATATTTTAAAATATAAAGTTACTCTTCCAAAATTTCCCTAATATTTAAGTTGGTTTTGTGTTTTTCCCCTACTTTGCTGGGTCCTTTGATGCTATCTTTATGTTTTTTCTTTTTTTTGGACAGTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCCGGCACGTAAGATCCATTTTTTGTTTCATCTTTGATGTTTGTTTGGATCTCTCTCTCATTTATTTCTATTTGATTTTGCATTCATGTGTCTAAGTTTCCATGATTTACTTATCACAACATTTCTCAATCTGAAGCTGCATTCATATTCAGTTTTCTTTTGCCCTTTCAACTGATAAGCACAACGTTTAATTGATATGATGAATTGTACAAAAGCGAGAATAAAAATCCCAAAAAACATTTAGCGAGAGAAAAACGTGTACGATGGGAGAACTTAGTGAGAGAAGTGAGAGATTAGATGAAGAAAGTTTGTCCGAAAGAGATCGATTATGAAGTGTTTGAGCCTAATGCATCCGATAAACCACACCCATTAGGGACTTCCTTGCAAATCACATGGTTATTAGTTTTGAGATTCCACATCGGTTGGAGAGGGGAACGAAACATTCCTTATAAGAGTGTGGAAACCTCTGCCTAGTAAACGTGTTTTAAAACCTTGAGGGGAAGCCCTAGAAGGGAAAGTTCAAAGTGGACAATATATGCTAGCTTTGCCTTTTTTTTTCTTCTTCTTTATTGAATCTGATCCAAAGGGCTTAAAAAAAGGCATGTAGGACTGATTGAGCATAGAACAGCTTTGGACTCAATTGAAATCTCTTCCAGTTTCCATTTAGCAGCTCCATATTGAACTCATATGTCTGTTTCAGAGATGTATAAGACCGTGTGCTTCCATTGCAGGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAA

mRNA sequence

ATGGGCCGATATGTCGGCTGCGGACTGAAAGCAAGGAGAGCGACAGGTCGTTCTAATTTCAAACCATCGTCATCATATGTGGAAATAAAAAAGGGGAAATTAAAAAGCCCTTCACACAAAACTCTTCTTGAAGTCATTCCATTTCAAGCCCAGAAAGCAAAGAACAAGATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGCGCTGCAGCTCTTGGATTGGGCACGTACGGTGCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCCGGCACGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAA

Coding sequence (CDS)

ATGGGCCGATATGTCGGCTGCGGACTGAAAGCAAGGAGAGCGACAGGTCGTTCTAATTTCAAACCATCGTCATCATATGTGGAAATAAAAAAGGGGAAATTAAAAAGCCCTTCACACAAAACTCTTCTTGAAGTCATTCCATTTCAAGCCCAGAAAGCAAAGAACAAGATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGCGCTGCAGCTCTTGGATTGGGCACGTACGGTGCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCCGGCACGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAA

Protein sequence

MGRYVGCGLKARRATGRSNFKPSSSYVEIKKGKLKSPSHKTLLEVIPFQAQKAKNKMNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF

Homology

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BLAST of Csor.00g279330 vs. ExPASy Swiss-Prot
Match: A4K526 (Transmembrane protein 256 homolog OS=Bufo gargarizans OX=30331 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16
Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 62  WHKVAGISGAAALGLGTYGAHVFK--PQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPN 121
           W ++  +SGA A+  G YGAH F+   ++   KE+++T + YH +H+ ALLA P  + P 
Sbjct: 7   WGRLGAVSGALAVTAGAYGAHGFRRSDRDEYLKELFETGNRYHFLHSLALLAVPHCRRPL 66

Query: 122 IFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 166
           + G LLT+GI+ FSGT Y  AL  D   +  AP+GG   I  WA++
Sbjct: 67  LAGSLLTSGIVLFSGTFYYQALSGDPTLTKAAPYGGTLLILGWAAM 112

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BLAST of Csor.00g279330 vs. ExPASy Swiss-Prot
Match: Q568J8 (Transmembrane protein 256 OS=Danio rerio OX=7955 GN=tmem256 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.8e-14
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 64  KVAGISGAAALGLGTYGAHVFKPQNPA--YKEVWQTASLYHLVHTAALLAAPSTKNPNIF 123
           +VAGISGA A+  G YGAH F+    +   +E++ TA+ YH  H+ ALL A   + P + 
Sbjct: 9   RVAGISGALAVAAGAYGAHGFRRSEASDYQRELFDTANKYHFYHSLALLGAARCRKPALA 68

Query: 124 GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 166
           G +L  G+  F G  Y   L  D  +S LAP GG   I  WA++
Sbjct: 69  GVILLTGMGCFCGPLYHQPLTNDPSFSKLAPIGGSLLIVGWAAM 112

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BLAST of Csor.00g279330 vs. ExPASy Swiss-Prot
Match: Q5F285 (Transmembrane protein 256 OS=Mus musculus OX=10090 GN=Tmem256 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 9.3e-12
Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 0


Query: 62  WHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNIF 121
           + ++  +SGA ALGL +YGAH  +  +   KE++  A+ +H +H+ ALL  PS + P   
Sbjct: 8   FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPSCRKPVWA 67

Query: 122 GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 168
           G LL +G   F  + Y  AL  D    TL P GG   I  W +L F
Sbjct: 68  GLLLASGTTLFCTSFYYQALSGDTSIQTLGPVGGSLLILGWLALAF 113

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BLAST of Csor.00g279330 vs. ExPASy Swiss-Prot
Match: Q2KI29 (Transmembrane protein 256 OS=Bos taurus OX=9913 GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-11
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 62  WHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNIF 121
           + ++  +SGA ALGL +YGAH  +  +   KE++   + +H +H+ ALLA P  + P   
Sbjct: 8   FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKTNKHHFLHSLALLAVPLCRKPLWA 67

Query: 122 GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 166
           G LL +G   F  T Y  AL  D  +  LAP GG   +  W +L
Sbjct: 68  GLLLASGTTLFCTTFYYQALSGDPSFQNLAPVGGSLLLLGWLAL 111

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BLAST of Csor.00g279330 vs. ExPASy Swiss-Prot
Match: Q8N2U0 (Transmembrane protein 256 OS=Homo sapiens OX=9606 GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.9e-11
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 62  WHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNIF 121
           + ++  +SGAAALG  +YGAH  +  +   KE++  A+ +H +H+ ALL  P  + P   
Sbjct: 8   FRRLGALSGAAALGFASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPHCRKPLWA 67

Query: 122 GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 166
           G LL +G   F  + Y  AL  D    TLAP GG   +  W +L
Sbjct: 68  GLLLASGTTLFCTSFYYQALSGDPSIQTLAPAGGTLLLLGWLAL 111

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BLAST of Csor.00g279330 vs. NCBI nr
Match: KAG6572230.1 (hypothetical protein SDJN03_28958, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 340 bits (873), Expect = 4.52e-118
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGRYVGCGLKARRATGRSNFKPSSSYVEIKKGKLKSPSHKTLLEVIPFQAQKAKNKMNPL 60
           MGRYVGCGLKARRATGRSNFKPSSSYVEIKKGKLKSPSHKTLLEVIPFQAQKAKNKMNPL
Sbjct: 1   MGRYVGCGLKARRATGRSNFKPSSSYVEIKKGKLKSPSHKTLLEVIPFQAQKAKNKMNPL 60

Query: 61  HWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNI 120
           HWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNI
Sbjct: 61  HWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNI 120

Query: 121 FGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 167
           FGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 121 FGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 167

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BLAST of Csor.00g279330 vs. NCBI nr
Match: XP_008462078.1 (PREDICTED: transmembrane protein 256 homolog [Cucumis melo])

HSP 1 Score: 235 bits (600), Expect = 1.27e-76
Identity = 117/135 (86.67%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 33  KLKSPSHKTLLEVIPFQAQKAKNKMNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYK 92
           K K P  K+L+E  P    KAKNKMNPL+WHKVA ISG AALGLGTYGAH FKP+NPAYK
Sbjct: 26  KKKEPFTKSLVEANP----KAKNKMNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYK 85

Query: 93  EVWQTASLYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAP 152
           EVWQTASLYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGTCYTVALLEDRKYS+LAP
Sbjct: 86  EVWQTASLYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAP 145

Query: 153 FGGFAFIGAWASLLF 167
           FGGFAFIGAWASLLF
Sbjct: 146 FGGFAFIGAWASLLF 156

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BLAST of Csor.00g279330 vs. NCBI nr
Match: XP_022953076.1 (transmembrane protein 256 homolog [Cucurbita moschata] >KAG7011866.1 hypothetical protein SDJN02_26773 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230 bits (586), Expect = 3.90e-75
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 57  MNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 116
           MNPLHWHKVAGISG AALGLGTYG+HVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 117 NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 167
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

[Close]

BLAST of Csor.00g279330 vs. NCBI nr
Match: XP_022969303.1 (transmembrane protein 256 homolog [Cucurbita maxima])

HSP 1 Score: 229 bits (583), Expect = 1.12e-74
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 57  MNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 116
           MNPLHWHKVA ISG AALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 117 NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 167
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

[Close]

BLAST of Csor.00g279330 vs. NCBI nr
Match: XP_023554646.1 (transmembrane protein 256 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228 bits (580), Expect = 3.20e-74
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 57  MNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 116
           MNPLHWHKVA ISG +ALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLHWHKVAAISGVSALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 117 NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 167
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

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BLAST of Csor.00g279330 vs. ExPASy TrEMBL
Match: A0A1S3CG60 (transmembrane protein 256 homolog OS=Cucumis melo OX=3656 GN=LOC103500518 PE=4 SV=1)

HSP 1 Score: 235 bits (600), Expect = 6.17e-77
Identity = 117/135 (86.67%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 33  KLKSPSHKTLLEVIPFQAQKAKNKMNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYK 92
           K K P  K+L+E  P    KAKNKMNPL+WHKVA ISG AALGLGTYGAH FKP+NPAYK
Sbjct: 26  KKKEPFTKSLVEANP----KAKNKMNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYK 85

Query: 93  EVWQTASLYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAP 152
           EVWQTASLYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGTCYTVALLEDRKYS+LAP
Sbjct: 86  EVWQTASLYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAP 145

Query: 153 FGGFAFIGAWASLLF 167
           FGGFAFIGAWASLLF
Sbjct: 146 FGGFAFIGAWASLLF 156

[Close]

BLAST of Csor.00g279330 vs. ExPASy TrEMBL
Match: A0A6J1GM00 (transmembrane protein 256 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455589 PE=4 SV=1)

HSP 1 Score: 230 bits (586), Expect = 1.89e-75
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 57  MNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 116
           MNPLHWHKVAGISG AALGLGTYG+HVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 117 NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 167
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

[Close]

BLAST of Csor.00g279330 vs. ExPASy TrEMBL
Match: A0A6J1I0K9 (transmembrane protein 256 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468350 PE=4 SV=1)

HSP 1 Score: 229 bits (583), Expect = 5.40e-75
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 57  MNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 116
           MNPLHWHKVA ISG AALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLHWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 117 NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 167
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

[Close]

BLAST of Csor.00g279330 vs. ExPASy TrEMBL
Match: A0A6J1C1Y8 (transmembrane protein 256 homolog OS=Momordica charantia OX=3673 GN=LOC111007644 PE=4 SV=1)

HSP 1 Score: 223 bits (567), Expect = 1.48e-72
Identity = 106/111 (95.50%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 57  MNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 116
           MNPL WHKVA ISG AALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALL APSTK
Sbjct: 1   MNPLLWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLVAPSTK 60

Query: 117 NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 167
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAF+GAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFVGAWASLLF 111

[Close]

BLAST of Csor.00g279330 vs. ExPASy TrEMBL
Match: A0A0A0K1T6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032280 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 8.57e-72
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 57  MNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 116
           MNPL+WHKVA ISG AALGLGTYGAH FKP+NPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 117 NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 167
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYS+LAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAPFGGFAFIGAWASLLF 111

[Close]

BLAST of Csor.00g279330 vs. TAIR 10
Match: AT2G04900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF423 (InterPro:IPR006696); Has 1824 Blast hits to 1824 proteins in 878 species: Archae - 0; Bacteria - 1498; Metazoa - 118; Fungi - 14; Plants - 58; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). )

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-51
Identity = 94/116 (81.03%), Postives = 105/116 (90.52%), Query Frame = 0


Query: 52  KAKNKMNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLA 111
           + +  M+P  WHKVA ISG AALGLGTYGAHVFKP+NP+YK+VWQTASLYHLVHTAAL++
Sbjct: 13  RGRRSMDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVS 72

Query: 112 APSTKNPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 168
           APSTK PNIFGGLLTAGI+AFSGTCY VAL EDRK+STLAPFGGFAFI AWA+LLF
Sbjct: 73  APSTKYPNIFGGLLTAGIVAFSGTCYMVALREDRKFSTLAPFGGFAFIAAWATLLF 128

[Close]

BLAST of Csor.00g279330 vs. TAIR 10
Match: AT2G04900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF423 (InterPro:IPR006696); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-34
Identity = 66/86 (76.74%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 52  KAKNKMNPLHWHKVAGISGAAALGLGTYGAHVFKPQNPAYKEVWQTASLYHLVHTAALLA 111
           + +  M+P  WHKVA ISG AALGLGTYGAHVFKP+NP+YK+VWQTASLYHLVHTAAL++
Sbjct: 13  RGRRSMDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVS 72

Query: 112 APSTKNPNIFGGLLTAGILAFSGTCY 138
           APSTK PNIFGGLLTAGI+AFSG  +
Sbjct: 73  APSTKYPNIFGGLLTAGIVAFSGVIW 98

The following BLAST results are available for this feature:

BLAST of Csor.00g279330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4K526	1.3e-16	41.51	Transmembrane protein 256 homolog OS=Bufo gargarizans OX=30331 PE=3 SV=1	[more]
Q568J8	5.8e-14	40.38	Transmembrane protein 256 OS=Danio rerio OX=7955 GN=tmem256 PE=3 SV=1	[more]
Q5F285	9.3e-12	37.74	Transmembrane protein 256 OS=Mus musculus OX=10090 GN=Tmem256 PE=1 SV=1	[more]
Q2KI29	3.5e-11	36.54	Transmembrane protein 256 OS=Bos taurus OX=9913 GN=TMEM256 PE=3 SV=1	[more]
Q8N2U0	7.9e-11	36.54	Transmembrane protein 256 OS=Homo sapiens OX=9606 GN=TMEM256 PE=3 SV=1	[more]

BLAST of Csor.00g279330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572230.1	4.52e-118	100.00	hypothetical protein SDJN03_28958, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008462078.1	1.27e-76	86.67	PREDICTED: transmembrane protein 256 homolog [Cucumis melo]	[more]
XP_022953076.1	3.90e-75	98.20	transmembrane protein 256 homolog [Cucurbita moschata] >KAG7011866.1 hypothetica...	[more]
XP_022969303.1	1.12e-74	98.20	transmembrane protein 256 homolog [Cucurbita maxima]	[more]
XP_023554646.1	3.20e-74	97.30	transmembrane protein 256 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g279330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CG60	6.17e-77	86.67	transmembrane protein 256 homolog OS=Cucumis melo OX=3656 GN=LOC103500518 PE=4 S...	[more]
A0A6J1GM00	1.89e-75	98.20	transmembrane protein 256 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455589 ...	[more]
A0A6J1I0K9	5.40e-75	98.20	transmembrane protein 256 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468350 PE...	[more]
A0A6J1C1Y8	1.48e-72	95.50	transmembrane protein 256 homolog OS=Momordica charantia OX=3673 GN=LOC111007644...	[more]
A0A0A0K1T6	8.57e-72	94.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032280 PE=4 SV=1	[more]

BLAST of Csor.00g279330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04900.1	1.2e-51	81.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT2G04900.2	1.8e-34	76.74	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006696	Protein of unknown function DUF423	PFAM	PF04241	DUF423	coord: 76..155 e-value: 5.5E-20 score: 71.4
IPR006696	Protein of unknown function DUF423	PANTHER	PTHR43461	TRANSMEMBRANE PROTEIN 256	coord: 50..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g279330.m01	Csor.00g279330.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane