Csor.00g279010 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g279010
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription termination factor MTERF6, chloroplastic/mitochondrial
Location	Csor_Chr19: 9933943 .. 9936079 (-)
RNA-Seq Expression	Csor.00g279010
Synteny	Csor.00g279010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTAGCGGCAGTGGAAATGGTACTAGTATGCTGTGGTTCTTCAGGGACAAAGGATTTGATGATGGAAGCATCGACAAGATGTTTAAAAAGTGTAGGCGTTTGGAAGGTATGCAGAATGAAAGAGCTGCTGAAAATTGGGAATATTTGGAAGGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGTCCTAAGATTCTAGTTCTTGGTCTTCAAGAGAAAATTGCTCCCATGGTTGAGTGCCTTGCAACACTCAGCACTAAGCCTCGTGAAATTGCTACAGCTATTGCCAAATTTCCTGGCATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCTCTGGGTGTCCCTGAAAAGCAGCTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGCTACAGCATTGAATCGAAGCTCATTGAAACTGTAGATTTTCTTGCTGGGGTTGGGCTAACGAAGGAGGGGATGATTGGAAAAGTTCTAGTAAAGAATCCATTTCTCATTGGATATAGTGTTCATAAAAGGCTCCGTCCTACTTTCGAGTTTCTGAAATCGATCGGTCTCAGTGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACGTTTTGTGTAGGGATGTGGACAAAGTTTTGAGACCCAATTTGGATTATCTGAGGAGACGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTCTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAGAAAACTTGACGAAGTTGCCGAATATCCCGAGTTTTTTAAGCATGGTTTGAAGAAACGACTCGAGTTACGGCACAGATTGTTGAAAGAGAAGACAATGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGAGTTTGTTATGAGGCTATGCTTGGAGATTTAGGTCCTCATATACTGAAAGGATGTTGTTTCTCAGCATCTTTACAAGTTTTGTTGCCTAATAATTCATTTTCCAGGCTTCTAGTTAAAGTTTAGAGCCTTCGTCCTGCCGAGTAATTGTTTTTAGCCCTGGATTACCCTTCCTTCATTCACGGTTCATGCTTTAGGTTCGTTATGGTGTTCCTTGTGTTTTAACAATTCAAATGGAGTGGAGTACATACAGAGTACTCTCATGTAACTCTTTTCCTTATGTTGTATGGGTTGAGATTTGGACCCCTGATCCTCCCTTGTAGTTTTCATCTTTACTGTTGAGAATTTTTGTGCCAGAATTTGTACTCTTCTTCGACCAATTATTATTAACAGTTCCAATGGAATTTTGGGTTTTTGCATCTGGGGGAGTATCTCTTTGAAAATCATAAGATGTTTATTACTTGAATGCTAACCAAAGCCCTGGGATGAAAGTCACTTCTCCTGTGATTACCTTAAACCCCTACAGTAGGGAGTTGAAAACTTGGATTAGCCAGTAGAAATCGTGTTTTTCTGTGCAGTTTATATCGATATTTACATGTTTCTATAGTTTACACTATGCATACAAGAAATTTCTTGAATCTATGCCATGACTGTACCCCACGGCCTATGAATAATGATATGCAAATTTTCACTTGGATGCTTCATTGTTTTCCAAGCCTGCCGGTCTCATCCTGAAATATATTGTCATTCCTATTGCCTAAATCTTGCATCATTATTTTGAGGTCTTCTGTTGTTGCAAGATTAAACATTATTCTCTGTTTCTGTTAAACAGACCGAACATTATTAAAACAACGGTGTAATTGTCGGGATCAGATTGAAGATGATAACAACTTAGAACTTGGACTTGAATTTTTTTCTATTATCTGTAATCTAGGAAGTTCTTAAACCCCTTTTGATTTATAAAGAAAACATGTCAATCTTAACTGTAAAGCGAAAATAATGGTACAACAGACAAGTGCTAGCGCGTTGTGCAGAAGCAACCAGAGGAACATCTCGGGACATTGGCGAGTTTGAGCCCAGGTATACATATCCCCTTGCATGTATCAGAGGAGAATAAATGATGTTTTCTACAATTTGATGACGAGCTACATGTTTTTCAGGTAA

mRNA sequence

ATGGAAATTAGCGGCAGTGGAAATGGTACTAGTATGCTGTGGTTCTTCAGGGACAAAGGATTTGATGATGGAAGCATCGACAAGATGTTTAAAAAGTGTAGGCGTTTGGAAGGTATGCAGAATGAAAGAGCTGCTGAAAATTGGGAATATTTGGAAGGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGTCCTAAGATTCTAGTTCTTGGTCTTCAAGAGAAAATTGCTCCCATGGTTGAGTGCCTTGCAACACTCAGCACTAAGCCTCGTGAAATTGCTACAGCTATTGCCAAATTTCCTGGCATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCTCTGGGTGTCCCTGAAAAGCAGCTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGCTACAGCATTGAATCGAAGCTCATTGAAACTGTAGATTTTCTTGCTGGGGTTGGGCTAACGAAGGAGGGGATGATTGGAAAAGTTCTAGTAAAGAATCCATTTCTCATTGGATATAGTGTTCATAAAAGGCTCCGTCCTACTTTCGAGTTTCTGAAATCGATCGGTCTCAGTGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACGTTTTGTGTAGGGATGTGGACAAAGTTTTGAGACCCAATTTGGATTATCTGAGGAGACGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTCTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAGAAAACTTGACGAAGTTGCCGAATATCCCGAGTTTTTTAAGCATGGTTTGAAGAAACGACTCGAGTTACGGCACAGATTGTTGAAAGAGAAGACAATGGACTTTACCTTGAGTGAATTACAAGTGCTAGCGCGTTGTGCAGAAGCAACCAGAGGAACATCTCGGGACATTGGCGAGTTTGAGCCCAGGTAA

Coding sequence (CDS)

ATGGAAATTAGCGGCAGTGGAAATGGTACTAGTATGCTGTGGTTCTTCAGGGACAAAGGATTTGATGATGGAAGCATCGACAAGATGTTTAAAAAGTGTAGGCGTTTGGAAGGTATGCAGAATGAAAGAGCTGCTGAAAATTGGGAATATTTGGAAGGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGTCCTAAGATTCTAGTTCTTGGTCTTCAAGAGAAAATTGCTCCCATGGTTGAGTGCCTTGCAACACTCAGCACTAAGCCTCGTGAAATTGCTACAGCTATTGCCAAATTTCCTGGCATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCTCTGGGTGTCCCTGAAAAGCAGCTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGCTACAGCATTGAATCGAAGCTCATTGAAACTGTAGATTTTCTTGCTGGGGTTGGGCTAACGAAGGAGGGGATGATTGGAAAAGTTCTAGTAAAGAATCCATTTCTCATTGGATATAGTGTTCATAAAAGGCTCCGTCCTACTTTCGAGTTTCTGAAATCGATCGGTCTCAGTGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACGTTTTGTGTAGGGATGTGGACAAAGTTTTGAGACCCAATTTGGATTATCTGAGGAGACGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTCTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAGAAAACTTGACGAAGTTGCCGAATATCCCGAGTTTTTTAAGCATGGTTTGAAGAAACGACTCGAGTTACGGCACAGATTGTTGAAAGAGAAGACAATGGACTTTACCTTGAGTGAATTACAAGTGCTAGCGCGTTGTGCAGAAGCAACCAGAGGAACATCTCGGGACATTGGCGAGTTTGAGCCCAGGTAA

Protein sequence

MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLSELQVLARCAEATRGTSRDIGEFEPR

Homology

[Close]

BLAST of Csor.00g279010 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.8e-115
Identity = 203/308 (65.91%), Postives = 257/308 (83.44%), Query Frame = 0


Query: 8   NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGI-GIQKRKLPSVVS 67
           N +S++WFFRDKGFDD SIDKM +KC++LE  Q++ A+ENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E++ PMVECL++L   PRE+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVH 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL ++GMIGKVLVKNPFL+GYSV 
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTFEFLK-SIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDGEIVSL 247
           KRLRPT EFLK S+GLSE  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRLLKEKT 307
           VTGYP ILIKS+++SL+PRIRFLV++MGR +DEVA YPEFF HGLKK++E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 MDFTLSEL 314
           +D +L E+
Sbjct: 305 IDCSLREM 312

[Close]

BLAST of Csor.00g279010 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.8e-28
Identity = 75/268 (27.99%), Postives = 144/268 (53.73%), Query Frame = 0


Query: 50  YLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILS 109
           YL  +G+   ++ ++  K        L  KI P+VE L  L     +I T + K P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 110 YSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGM 169
            S+ + L P +AF + LG+ + Q  K+I   P +++YS   KL  TV+FL+  GLT+E  
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-Q 321

Query: 170 IGKVLVKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNL 229
           IG++L + P ++ YSV  +LRPT E+ +S+    +D+  +  + P      ++  L+P  
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVT 381

Query: 230 DYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHG 289
           ++   +GF   EI  +++ Y  +   S++ ++ P+  +  + M     E+ ++P+FF + 
Sbjct: 382 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYS 441

Query: 290 LKKRLELRHRLLKEKTMDFTLSELQVLA 318
           L++R++ R+ L++   +   L+++  L+
Sbjct: 442 LQERIKPRYELVQRSGVRLLLNQVLSLS 463

[Close]

BLAST of Csor.00g279010 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.6e-26
Identity = 72/280 (25.71%), Postives = 142/280 (50.71%), Query Frame = 0


Query: 32  KCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLS 91
           +C  L     E      ++   +G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 92  TKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESK 151
               E+   +A  P ++  S+EE+  PL+ +F  LG+P++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 152 LIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRPTFEFLKS-IGLSEMDLQAVA 211
           +   V FL  +G+  E  IG +LVK P L+  S++K++RP   FL +  G+++ D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNEA-IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 212 LKFPDVLCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVE 271
              P +L   +   L PN+ Y    G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 272 IMGRKLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTL 311
            M R L ++ E+P FF + L++R+  RH ++ E  ++F L
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKL 581

[Close]

BLAST of Csor.00g279010 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-23
Identity = 67/310 (21.61%), Postives = 150/310 (48.39%), Query Frame = 0


Query: 49  EYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGIL 108
           +YL  +G+++  LP ++ + P++L   +   +AP+V+ L  +  +P ++   + ++P +L
Sbjct: 140 DYLGKLGVRRDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPTDVPRVLERYPELL 199

Query: 109 SYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEG 168
            + +E  +   +A+   +GV  +Q+G +I   P ++   +   +   V+ L G+GL +  
Sbjct: 200 GFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLA 259

Query: 169 MIGKVLVKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVL----------- 228
            I +++ K P+++G+ + ++++P  E L  IG+ +  L ++ +++PDVL           
Sbjct: 260 -IARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRKEALASIVMQYPDVLGLELRDKLVAQ 319

Query: 229 -----------CRDVDKVLR--------------PNLDYLRRRGFKDGEIVSLVTGYPPI 288
                        D  +VL                ++++L   GF   ++  +V   P +
Sbjct: 320 QSLFESSILVSREDFGRVLERMPQAISLGRAAVLKHVNFLTACGFMLSQVSKMVVACPQL 379

Query: 289 LIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLSE 323
           L  +I   +     +    M R L+E+ E+P FF +G++  +  RH ++  K +  +L+ 
Sbjct: 380 LALNID-IMRMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHEMVSRKGLTCSLA- 439

[Close]

BLAST of Csor.00g279010 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 8.1e-23
Identity = 67/251 (26.69%), Postives = 129/251 (51.39%), Query Frame = 0


Query: 54  IGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVE 113
           + + +R +PS+     +I V   QE++    + L ++  K R+I   + + P IL Y+VE
Sbjct: 202 VQMYERHMPSL-----QINVFSAQERL----DYLLSVGVKHRDIKRMLLRQPQILQYTVE 261

Query: 114 EKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKV 173
             L   ++F   LG+P  ++G+++   P L SYS+E+ L  T+ +L      KE  +GKV
Sbjct: 262 NNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKV 321

Query: 174 LVKNPFLIGYSVHKRLRPTFEFL-KSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYL 233
           +  +P ++   +       + FL K +G     +  +  K P +L   +D    P +++L
Sbjct: 322 VQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFL 381

Query: 234 RRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKK 293
           R  G  + +I+ ++T    +L  S++ +L+P+  +LV  +  ++  + +YP +    L +
Sbjct: 382 RSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQ 441

Query: 294 RLELRHRLLKE 304
           R+  RHR L E
Sbjct: 442 RIRPRHRFLVE 443

[Close]

BLAST of Csor.00g279010 vs. NCBI nr
Match: KAG6572198.1 (Transcription termination factor MTERF6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 664 bits (1714), Expect = 1.24e-240
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK
Sbjct: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240
           IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKTMDFTLSELQVLARCAEATRGTSRDIGEFEPR 336
           LKEKTMDFTLSELQVLARCAEATRGTSRDIGEFEPR
Sbjct: 301 LKEKTMDFTLSELQVLARCAEATRGTSRDIGEFEPR 336

[Close]

BLAST of Csor.00g279010 vs. NCBI nr
Match: XP_022969173.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucurbita maxima])

HSP 1 Score: 612 bits (1577), Expect = 7.01e-220
Identity = 309/313 (98.72%), Postives = 311/313 (99.36%), Query Frame = 0


Query: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           MEISGS NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILVLGLQEKIAPMVECLATL+TKPREIATAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240
           IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPD+LCRDVDKVLRPNLDYLRRRGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGR LDEVAEYPEFFKHGLKKRLELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKTMDFTLSEL 313
           LKEKTMDFTLSEL
Sbjct: 301 LKEKTMDFTLSEL 313

[Close]

BLAST of Csor.00g279010 vs. NCBI nr
Match: KAG7011838.1 (Transcription termination factor MTERF6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 612 bits (1577), Expect = 7.01e-220
Identity = 310/313 (99.04%), Postives = 310/313 (99.04%), Query Frame = 0


Query: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK
Sbjct: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVV KCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVFKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240
           IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGR LDEVAEYPEFFKHGLKKRLELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKTMDFTLSEL 313
           LKEKT DFTLSEL
Sbjct: 301 LKEKTTDFTLSEL 313

[Close]

BLAST of Csor.00g279010 vs. NCBI nr
Match: XP_022952708.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucurbita moschata])

HSP 1 Score: 608 bits (1568), Expect = 1.65e-218
Identity = 307/313 (98.08%), Postives = 310/313 (99.04%), Query Frame = 0


Query: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           MEISGS NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTK+GMIGKVL KNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240
           IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPD+LCRDVDKVLRPNLDYLRRRGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRI+FLVEIM RKLDEVAEYPEFFKHGLKKRLELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIKFLVEIMERKLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKTMDFTLSEL 313
           LKEKTMDFTLSEL
Sbjct: 301 LKEKTMDFTLSEL 313

[Close]

BLAST of Csor.00g279010 vs. NCBI nr
Match: XP_023554548.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 605 bits (1561), Expect = 1.92e-217
Identity = 306/313 (97.76%), Postives = 308/313 (98.40%), Query Frame = 0


Query: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           MEISGS NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTK+GMIGKVL KNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240
           IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPD+LCRDVDKVLRPNLDYLRR GFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGR LDEVAEYPEFFKHGLKKRLELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKTMDFTLSEL 313
           LKEKT DFTLSEL
Sbjct: 301 LKEKTTDFTLSEL 313

[Close]

BLAST of Csor.00g279010 vs. ExPASy TrEMBL
Match: A0A6J1I081 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111468249 PE=3 SV=1)

HSP 1 Score: 612 bits (1577), Expect = 3.40e-220
Identity = 309/313 (98.72%), Postives = 311/313 (99.36%), Query Frame = 0


Query: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           MEISGS NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILVLGLQEKIAPMVECLATL+TKPREIATAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240
           IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPD+LCRDVDKVLRPNLDYLRRRGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGR LDEVAEYPEFFKHGLKKRLELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKTMDFTLSEL 313
           LKEKTMDFTLSEL
Sbjct: 301 LKEKTMDFTLSEL 313

[Close]

BLAST of Csor.00g279010 vs. ExPASy TrEMBL
Match: A0A6J1GLD3 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455322 PE=3 SV=1)

HSP 1 Score: 608 bits (1568), Expect = 7.99e-219
Identity = 307/313 (98.08%), Postives = 310/313 (99.04%), Query Frame = 0


Query: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           MEISGS NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTK+GMIGKVL KNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240
           IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPD+LCRDVDKVLRPNLDYLRRRGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRI+FLVEIM RKLDEVAEYPEFFKHGLKKRLELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIKFLVEIMERKLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKTMDFTLSEL 313
           LKEKTMDFTLSEL
Sbjct: 301 LKEKTMDFTLSEL 313

[Close]

BLAST of Csor.00g279010 vs. ExPASy TrEMBL
Match: A0A0A0K108 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029940 PE=3 SV=1)

HSP 1 Score: 558 bits (1439), Expect = 3.60e-199
Identity = 280/313 (89.46%), Postives = 294/313 (93.93%), Query Frame = 0


Query: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           ME S S NG  MLWFFRDKGFDD SIDKMF+KCRRLE MQNERA+ENWEYLE IGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATLSTKP EIA AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKL+ETVDFLAGVGLTKEG+IGKVL KNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240
           +GYSV KRLRPT EFLKSIGL++MDLQAVALKFPD+LCRDVDKVLR NLDYLR RGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGRKL+EVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKTMDFTLSEL 313
           LKEK +DF LSEL
Sbjct: 301 LKEKNVDFALSEL 313

[Close]

BLAST of Csor.00g279010 vs. ExPASy TrEMBL
Match: A0A1S3BQA2 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492550 PE=3 SV=1)

HSP 1 Score: 558 bits (1437), Expect = 7.26e-199
Identity = 279/313 (89.14%), Postives = 293/313 (93.61%), Query Frame = 0


Query: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           ME S S NG  MLWFFRDKGFDD SIDKMF+KCRRLE  QNERA+ENWEYLE IGIQKRK
Sbjct: 1   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATLSTKP EIA AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKL+ETVDFLAGVGLTKEG+IGKVL KNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240
           +GYSV KRLRPT EFLKSIGL++MDLQAVALKFPD+LCRDVDKVLR NLDYLR RGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGRKLDEVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKTMDFTLSEL 313
           LKEK +DFTLSEL
Sbjct: 301 LKEKNVDFTLSEL 313

[Close]

BLAST of Csor.00g279010 vs. ExPASy TrEMBL
Match: A0A5A7UUK2 (Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold640G00330 PE=3 SV=1)

HSP 1 Score: 558 bits (1437), Expect = 9.39e-199
Identity = 279/313 (89.14%), Postives = 293/313 (93.61%), Query Frame = 0


Query: 1   MEISGSGNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           ME S S NG  MLWFFRDKGFDD SIDKMF+KCRRLE  QNERA+ENWEYLE IGIQKRK
Sbjct: 8   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 67

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATLSTKP EIA AIAKFPGILSYSVEEKLCPLL
Sbjct: 68  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 127

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKL+ETVDFLAGVGLTKEG+IGKVL KNPFL
Sbjct: 128 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 187

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDG 240
           +GYSV KRLRPT EFLKSIGL++MDLQAVALKFPD+LCRDVDKVLR NLDYLR RGFKDG
Sbjct: 188 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 247

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGRKLDEVAEYP+FFKHGLKK+LELRHRL
Sbjct: 248 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 307

Query: 301 LKEKTMDFTLSEL 313
           LKEK +DFTLSEL
Sbjct: 308 LKEKNVDFTLSEL 320

[Close]

BLAST of Csor.00g279010 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 417.2 bits (1071), Expect = 1.3e-116
Identity = 203/308 (65.91%), Postives = 257/308 (83.44%), Query Frame = 0


Query: 8   NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGI-GIQKRKLPSVVS 67
           N +S++WFFRDKGFDD SIDKM +KC++LE  Q++ A+ENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E++ PMVECL++L   PRE+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVH 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL ++GMIGKVLVKNPFL+GYSV 
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTFEFLK-SIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDGEIVSL 247
           KRLRPT EFLK S+GLSE  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRLLKEKT 307
           VTGYP ILIKS+++SL+PRIRFLV++MGR +DEVA YPEFF HGLKK++E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 MDFTLSEL 314
           +D +L E+
Sbjct: 305 IDCSLREM 312

[Close]

BLAST of Csor.00g279010 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 417.2 bits (1071), Expect = 1.3e-116
Identity = 203/308 (65.91%), Postives = 257/308 (83.44%), Query Frame = 0


Query: 8   NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGI-GIQKRKLPSVVS 67
           N +S++WFFRDKGFDD SIDKM +KC++LE  Q++ A+ENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E++ PMVECL++L   PRE+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVH 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL ++GMIGKVLVKNPFL+GYSV 
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTFEFLK-SIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDGEIVSL 247
           KRLRPT EFLK S+GLSE  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRLLKEKT 307
           VTGYP ILIKS+++SL+PRIRFLV++MGR +DEVA YPEFF HGLKK++E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 MDFTLSEL 314
           +D +L E+
Sbjct: 305 IDCSLREM 312

[Close]

BLAST of Csor.00g279010 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 417.2 bits (1071), Expect = 1.3e-116
Identity = 203/308 (65.91%), Postives = 257/308 (83.44%), Query Frame = 0


Query: 8   NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGI-GIQKRKLPSVVS 67
           N +S++WFFRDKGFDD SIDKM +KC++LE  Q++ A+ENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E++ PMVECL++L   PRE+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVH 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL ++GMIGKVLVKNPFL+GYSV 
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTFEFLK-SIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDGEIVSL 247
           KRLRPT EFLK S+GLSE  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRLLKEKT 307
           VTGYP ILIKS+++SL+PRIRFLV++MGR +DEVA YPEFF HGLKK++E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 MDFTLSEL 314
           +D +L E+
Sbjct: 305 IDCSLREM 312

[Close]

BLAST of Csor.00g279010 vs. TAIR 10
Match: AT1G78930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-30
Identity = 88/300 (29.33%), Postives = 145/300 (48.33%), Query Frame = 0


Query: 49  EYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGIL 108
           E+LE IGI K  L  V+   P I++   +E    +   +  +S   ++    + K+P IL
Sbjct: 269 EFLESIGIPKYCLGKVLLLYPPIMLGKTEEIKRRVATAMEKVSVVNKDSGKLLLKYPWIL 328

Query: 109 SYSVEEKLCPLLAFFQA-----------------------------------LGVPEKQL 168
           S S++E    + +FF +                                   LGV +K++
Sbjct: 329 SPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGCSASNMEMMVKEFDKLGVRDKRM 388

Query: 169 GKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRPTF 228
           GK+I   P+L+      + ++ V FL  +G  KE ++G++L + P + G S+ K L+   
Sbjct: 389 GKVIPKMPQLLLCK-PQEFLKVVCFLEDLGFQKE-IVGQILCRCPEIFGCSIEKTLQKKL 448

Query: 229 EFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPIL 288
            FL   G+S      +  K+P+ L  D DK + P L YL   G  + EI  ++  + PIL
Sbjct: 449 IFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIAFMIRKFSPIL 508

Query: 289 IKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLSEL 314
             SI   L P+  FLV  M + + EV EYP +F + L+KR++ R R+LK + ++ TL E+
Sbjct: 509 GYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSLEKRIKPRFRVLKGRNIECTLQEM 566

[Close]

BLAST of Csor.00g279010 vs. TAIR 10
Match: AT4G14605.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.7e-29
Identity = 75/268 (27.99%), Postives = 144/268 (53.73%), Query Frame = 0


Query: 50  YLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILS 109
           YL  +G+   ++ ++  K        L  KI P+VE L  L     +I T + K P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 110 YSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGM 169
            S+ + L P +AF + LG+ + Q  K+I   P +++YS   KL  TV+FL+  GLT+E  
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-Q 321

Query: 170 IGKVLVKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDVLCRDVDKVLRPNL 229
           IG++L + P ++ YSV  +LRPT E+ +S+    +D+  +  + P      ++  L+P  
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVT 381

Query: 230 DYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPEFFKHG 289
           ++   +GF   EI  +++ Y  +   S++ ++ P+  +  + M     E+ ++P+FF + 
Sbjct: 382 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYS 441

Query: 290 LKKRLELRHRLLKEKTMDFTLSELQVLA 318
           L++R++ R+ L++   +   L+++  L+
Sbjct: 442 LQERIKPRYELVQRSGVRLLLNQVLSLS 463

The following BLAST results are available for this feature:

BLAST of Csor.00g279010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL6	1.8e-115	65.91	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
F4JVI3	3.8e-28	27.99	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	4.6e-26	25.71	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
B6TGN4	1.6e-23	21.61	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
Q9FM80	8.1e-23	26.69	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Csor.00g279010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572198.1	1.24e-240	100.00	Transcription termination factor MTERF6, chloroplastic/mitochondrial, partial [C...	[more]
XP_022969173.1	7.01e-220	98.72	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucurbita ...	[more]
KAG7011838.1	7.01e-220	99.04	Transcription termination factor MTERF6, chloroplastic/mitochondrial, partial [C...	[more]
XP_022952708.1	1.65e-218	98.08	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucurbita ...	[more]
XP_023554548.1	1.92e-217	97.76	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucurbita ...	[more]

BLAST of Csor.00g279010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I081	3.40e-220	98.72	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbit...	[more]
A0A6J1GLD3	7.99e-219	98.08	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbit...	[more]
A0A0A0K108	3.60e-199	89.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029940 PE=3 SV=1	[more]
A0A1S3BQA2	7.26e-199	89.14	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucumis ...	[more]
A0A5A7UUK2	9.39e-199	89.14	Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Csor.00g279010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38160.1	1.3e-116	65.91	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	1.3e-116	65.91	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.3	1.3e-116	65.91	Mitochondrial transcription termination factor family protein	[more]
AT1G78930.1	1.8e-30	29.33	Mitochondrial transcription termination factor family protein	[more]
AT4G14605.1	2.7e-29	27.99	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 134..165 e-value: 3.1E-4 score: 30.1 coord: 276..307 e-value: 19.0 score: 14.2 coord: 27..57 e-value: 390.0 score: 7.1 coord: 98..129 e-value: 5.1E-4 score: 29.4 coord: 207..238 e-value: 0.03 score: 23.5 coord: 62..93 e-value: 20.0 score: 14.1 coord: 171..202 e-value: 1.0E-7 score: 41.6 coord: 243..275 e-value: 0.21 score: 20.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 7..167 e-value: 8.6E-23 score: 80.7 coord: 115..313 e-value: 3.4E-38 score: 131.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 11..313
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 96..322 e-value: 6.2E-50 score: 171.8
None	No IPR available	PANTHER	PTHR13068:SF5	TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 11..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g279010.m01	Csor.00g279010.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding