Csor.00g277990 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAAGATCACCATGACTCTTCCCCAGGACATTCAGAGCTCTGCAGAGGATTACATGGATTCTCAGACTCACAGCAACCGCCCAATTTCATCTATTCTCATCATAATCGGTAATCCATCTTCGTATTTCAATGTTTTTTTTTTGTATGTACTTTATGTTTACTTTCTTAGTTGGGATTTCGACTGTTGGGTTGTGATTTGGCGATTCAGCTATGCAGACCGAAGCGCTTCCTTTGGTGGAGAAGTTTCAGCTCTCCGAAGATCATAACTCTGTGTAAGTTTTTTTTGTTCAACCTTGATGCTCTGACTTGCTAGTCTTGCTGATGTTCTATCCATTTGAGGATTGTTGGGAGAGGAGTCTCGACTAACTAAGGGAGTGATCATGAGTTTATAAGCATCAGAGTCATGCCCTTAACTAATAGAATTTTTAAATGTCGAACAAAGTTATGAGCCTCAAAGGTGTAGTAAAAAATGACCAAAGTGTTGAACGAAGGGTGTACTTTGATCGAGGGCTCTATAGAAGGAGTCGAGCTTGATTAAGGGGAGGCTTCGAGGGCTCCGTAGGCCTCAGGAGAGGCTCTATAGTATACTTTGTTCGAGGGGAGGATTGTTGAAGATTGTTGGGAGAGGAATCTTACCTCGGCTAATTAAGGGGTTGATCATGAGTTTATAAGTAAGGAATACATTTCCATTGGTACGAGGCCGTTTGGGGAAACCAAAAGCAAAACCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTAGAGAGTCGTGATTCCTACCTGAAGATTTTTCTTGATTCTTGGTATGATTTCGTTTTTCTTTTTATATCAAGTGCTTGATTGTGCAGGTTTCCAAAGGAGGTTCCGTGGGTTCGTTATCATGGGATGTACAAAGATCTTCAAATTAATTTAATGTGGCCTGGAAAGGATTCAGCATTGGGTATGGATAATTTATCACTAATCACCTTGTTTTCTTTGATTCATATCTGTCAGTGGAGGATCTCCATGGACTACTAATGTTAACGACTTGTAATGCATTTCATAAACTGAGCTTTACCATCCCCACAGGTTCTGTTCAAGCTCTGTTTGATACACCTGATTCCATTTAATCTCTGGCATGCCTTCTTTCTTTAGATAGTTGAGCTAGGTTTCTTTTTGTTTCCCTTTATTACATGATCTGGTTCAGACTGGCTAGCTATGGCTGCAACTTAGGTGCTTTTTATGATCTTACCTATGAAGTATAGATATCAAGTTTAGTTTTTATGACGTCTTTGTGTACTCAACACTCCTTTACGTGCTGGATACTTGAACTATATCTTTAGTACTAGAGCGTTAACTTTTTAAAAAATAACGGTTCAAGCCTACCGCTAGTAGATATTGTCCTCTTTAGGCTTTCCCTTTCAGGCTTCCCCTCAAGGTTTTTAAAACGTGTCTGTTAGGGAGAGGTTTCCCTACACCCTTTTAAAGAATGCTTTGTTTCCCTCTCCAACCAATATGGGACCTCACAATCCATTCCCCTTTGGGGCCAGCATTTTTGCTGGCACTTGTTCCCCTTTCCAATCGACGTGGATCTTACAATCACTTGGATATAATTGTTGAATTGTTAACTTGGTTTTGGGTGTTTTTAGACATTGCTTCATTAGCATCATACAACCAGATTCGTTTCTTTCATCATTTTGGAATAATCATCTGTTGCTATATCCTTGTGTTTTGTGTGTTCCTGTAAGTTCCATGTTCTTCTTTGTTCTGCACTTTTTTTGATAATGTGTTCAAAATAGAAGTTACAATGTAAGCTATCTGTTTCTGAAGTTCAAGTTACCTCTCAGGAGTTGATAGTGTCGGCACGATTTCTGCTTCGCTTGTAACCTATGCTTCTATCCAAGCATTGCAACCAGACCTGATCATCAATGCAGGCACTGCTGGTGGTTTTAAGGTATGTGTATATCTTTGATAGCAATCTACTTTTAAGGTTTCAGTGTTATAACCTTTTTTCTTCGTCAAGCATACATTGTTGCCTTGCTACACAGATTTGTTCTTTTAACCTTGATTCAAAGTTAAAAAAGAGCATCAAACTAGCATTTCCTTCATGGGACATGTTAATCTCTTTTTGGGGTTTTCATCGTTTTTCCTTTTGATCTTCTTTTTCTCCCCCTTGAATACTATTTGTGACATTCAGCCAACTTAGTGATGTTGGTTGATGTTGTAACAACCAAAGCCCACCGCTAGCTGACTCTTTGGGCTCTCCCTTTCGAACTTTCTCTCAAGGTTTTTAAAACACGTCTGCTAGGGAAAAGTTTCCACACTCTTATAAAGAATGTTTCGTTCCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCCTCATTTTGGCTGGCACTCGTTCTTCTCTCCAATCAACGTGGGATCTCACAGTTGTCCTCTCCCTCTCCTTATATATGTTTCCAAAACATTGAATAGTGGCTGTGTTCCTCAATCCAACAATTGTTGAATCTTTTTAAAATTCTGGGATTTATTTTGTAGTTTGGCCTACTAACAATTATGAAGGATTAAGGTCACTCTTATTTGCGTTTGACTGATGATTGGGTTGCATGCTATCAGGCCAAAGGAGCTAGCATTGGCGATGTGTTTCTGGTATCTGAGTGTGCCTTCCATGACAGACGTATACCTATTCCAGTAAGTATTATTTTCTAGAGCTGAAGAGCATAATGTATGCTTCAATTTGCAATTATCGTTGAACTTAACGGGTCGATCGTCTTTTCTTGTACGTCGTAATGGCATGTTTGTCTGTACAAGTTGAGCACTTTGTGCTGTGATTTGTGATAGTCTGATAGAGTATTAACAGCTTCAATTTTCCTGCTGCTTAATTCTGCCTCAAAGGATTCTTTCATCAGTATATGATGTACTTTACAGGTTTTTGATTTATATGGTGTCGGATTGAAGCAAACACTGAAAACACCGAATCTTCTCGCGGGACTCGACCTAAAGGTGAACTTCTTTCAGAAAGTATTAAATAGAGTTAACATTATGGTATATTTATTCTCTCTAAGTTGGATAATCCACAGCATTAGTTTGTTTTGGTACTGCGATGTTATTAGGTAGTCACTTCTGACCTTCAATGTGATGTAAGGGCTCCTAGTTTTCTTTGAAACGTATTTGAAGTTCCCGTTTCGAATAGCTTTCACGTCGATGATGAACCTGAAATGTTTCACCCATATGCATCATTACATGAATATAGATGTAAAGCAGAGCCAAGAAGTTAAATTTAAATTTGAAACTGCATGAAATCTTCCTGCTGTTTGAAACATTAGTTGAACATGTGCTACAAGAAGCATGTCACTGGCTTGATATGTTTGTTTTTATTACAAATTCTCAGTTTTCAATGTTATCAACTTCTATCTAAGTTGGAAAGAAGTCACTTTCATTGTCCATGAAGTGAAGCACTCTGAAAATGTCATGATGATCGAGTTTGCAGAATAATATATATTTGATCAGCTAAGTCATTTTGTTTCTTCTATCAGGTCGGAAAATTATCAACTGGTGACTCGCTGGACATGTCCGTGCAGGATGAAGCATCGATTATAGCTAACGATGCCACAGTAAAAGATATGGAGGTAGGTACCTGGAGTTAGCAAAGGCTGACACTGGCATAGATTTCTTTCGCTTCAAAATTCCATCAAAGTCTCTAACTCATTGATTTTGAATTTCAGGGAGCAGCAGTTGCCTATGTTGCAGATATGTTCAAAGTTCCTGCAATATTTGTAAAAGCTGTAACTGATATCGTTGATGGCGAAAAACCAACTGCAGAAGAATTCTTGCAGAATTTAGCTACAGTTTCTGCTGCATTGGATGAAGCAGTGACACAAGTTATACATTTCATCAGTGGAAAGTGCATTCATGAACTGTAA ATGGCCAAGATCACCATGACTCTTCCCCAGGACATTCAGAGCTCTGCAGAGGATTACATGGATTCTCAGACTCACAGCAACCGCCCAATTTCATCTATTCTCATCATAATCGCTATGCAGACCGAAGCGCTTCCTTTGGTGGAGAAGTTTCAGCTCTCCGAAGATCATAACTCTGTGTTTCCAAAGGAGGTTCCGTGGGTTCGTTATCATGGGATGTACAAAGATCTTCAAATTAATTTAATGTGGCCTGGAAAGGATTCAGCATTGGGAGTTGATAGTGTCGGCACGATTTCTGCTTCGCTTGTAACCTATGCTTCTATCCAAGCATTGCAACCAGACCTGATCATCAATGCAGGCACTGCTGGTGGTTTTAAGGCCAAAGGAGCTAGCATTGGCGATGTGTTTCTGGTATCTGAGTGTGCCTTCCATGACAGACGTATACCTATTCCAGTTTTTGATTTATATGGTGTCGGATTGAAGCAAACACTGAAAACACCGAATCTTCTCGCGGGACTCGACCTAAAGGTCGGAAAATTATCAACTGGTGACTCGCTGGACATGTCCGTGCAGGATGAAGCATCGATTATAGCTAACGATGCCACAGTAAAAGATATGGAGGGAGCAGCAGTTGCCTATGTTGCAGATATGTTCAAAGTTCCTGCAATATTTGTAAAAGCTGTAACTGATATCGTTGATGGCGAAAAACCAACTGCAGAAGAATTCTTGCAGAATTTAGCTACAGTTTCTGCTGCATTGGATGAAGCAGTGACACAAGTTATACATTTCATCAGTGGAAAGTGCATTCATGAACTGTAA ATGGCCAAGATCACCATGACTCTTCCCCAGGACATTCAGAGCTCTGCAGAGGATTACATGGATTCTCAGACTCACAGCAACCGCCCAATTTCATCTATTCTCATCATAATCGCTATGCAGACCGAAGCGCTTCCTTTGGTGGAGAAGTTTCAGCTCTCCGAAGATCATAACTCTGTGTTTCCAAAGGAGGTTCCGTGGGTTCGTTATCATGGGATGTACAAAGATCTTCAAATTAATTTAATGTGGCCTGGAAAGGATTCAGCATTGGGAGTTGATAGTGTCGGCACGATTTCTGCTTCGCTTGTAACCTATGCTTCTATCCAAGCATTGCAACCAGACCTGATCATCAATGCAGGCACTGCTGGTGGTTTTAAGGCCAAAGGAGCTAGCATTGGCGATGTGTTTCTGGTATCTGAGTGTGCCTTCCATGACAGACGTATACCTATTCCAGTTTTTGATTTATATGGTGTCGGATTGAAGCAAACACTGAAAACACCGAATCTTCTCGCGGGACTCGACCTAAAGGTCGGAAAATTATCAACTGGTGACTCGCTGGACATGTCCGTGCAGGATGAAGCATCGATTATAGCTAACGATGCCACAGTAAAAGATATGGAGGGAGCAGCAGTTGCCTATGTTGCAGATATGTTCAAAGTTCCTGCAATATTTGTAAAAGCTGTAACTGATATCGTTGATGGCGAAAAACCAACTGCAGAAGAATTCTTGCAGAATTTAGCTACAGTTTCTGCTGCATTGGATGAAGCAGTGACACAAGTTATACATTTCATCAGTGGAAAGTGCATTCATGAACTGTAA MAKITMTLPQDIQSSAEDYMDSQTHSNRPISSILIIIAMQTEALPLVEKFQLSEDHNSVFPKEVPWVRYHGMYKDLQINLMWPGKDSALGVDSVGTISASLVTYASIQALQPDLIINAGTAGGFKAKGASIGDVFLVSECAFHDRRIPIPVFDLYGVGLKQTLKTPNLLAGLDLKVGKLSTGDSLDMSVQDEASIIANDATVKDMEGAAVAYVADMFKVPAIFVKAVTDIVDGEKPTAEEFLQNLATVSAALDEAVTQVIHFISGKCIHEL Homology
BLAST of Csor.00g277990 vs. ExPASy Swiss-Prot
Match: Q9T0I8 (5'-methylthioadenosine nucleosidase OS=Arabidopsis thaliana OX=3702 GN=MTN1 PE=1 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 2.6e-96 Identity = 173/255 (67.84%), Postives = 216/255 (84.71%), Query Frame = 0
BLAST of Csor.00g277990 vs. ExPASy Swiss-Prot
Match: Q7XA67 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Arabidopsis thaliana OX=3702 GN=MTN2 PE=1 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 2.4e-94 Identity = 170/244 (69.67%), Postives = 206/244 (84.43%), Query Frame = 0
BLAST of Csor.00g277990 vs. ExPASy Swiss-Prot
Match: Q65SB6 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Mannheimia succiniciproducens (strain MBEL55E) OX=221988 GN=mtnN PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.2e-14 Identity = 58/183 (31.69%), Postives = 95/183 (51.91%), Query Frame = 0
BLAST of Csor.00g277990 vs. ExPASy Swiss-Prot
Match: Q6LUR4 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=mtnN PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 6.1e-13 Identity = 55/198 (27.78%), Postives = 97/198 (48.99%), Query Frame = 0
BLAST of Csor.00g277990 vs. ExPASy Swiss-Prot
Match: A5UCP4 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Haemophilus influenzae (strain PittEE) OX=374930 GN=mtnN PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 8.0e-13 Identity = 60/183 (32.79%), Postives = 92/183 (50.27%), Query Frame = 0
BLAST of Csor.00g277990 vs. NCBI nr
Match: KAG6572096.1 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 529 bits (1362), Expect = 3.65e-189 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of Csor.00g277990 vs. NCBI nr
Match: XP_023553717.1 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 516 bits (1329), Expect = 3.26e-184 Identity = 264/266 (99.25%), Postives = 265/266 (99.62%), Query Frame = 0
BLAST of Csor.00g277990 vs. NCBI nr
Match: XP_022952472.1 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [Cucurbita moschata]) HSP 1 Score: 516 bits (1328), Expect = 4.63e-184 Identity = 263/266 (98.87%), Postives = 266/266 (100.00%), Query Frame = 0
BLAST of Csor.00g277990 vs. NCBI nr
Match: XP_022969508.1 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [Cucurbita maxima]) HSP 1 Score: 514 bits (1324), Expect = 1.88e-183 Identity = 263/266 (98.87%), Postives = 264/266 (99.25%), Query Frame = 0
BLAST of Csor.00g277990 vs. NCBI nr
Match: XP_038888840.1 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Benincasa hispida]) HSP 1 Score: 469 bits (1207), Expect = 1.28e-165 Identity = 240/266 (90.23%), Postives = 251/266 (94.36%), Query Frame = 0
BLAST of Csor.00g277990 vs. ExPASy TrEMBL
Match: A0A6J1GKI2 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455148 PE=4 SV=1) HSP 1 Score: 516 bits (1328), Expect = 2.24e-184 Identity = 263/266 (98.87%), Postives = 266/266 (100.00%), Query Frame = 0
BLAST of Csor.00g277990 vs. ExPASy TrEMBL
Match: A0A6J1I168 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468484 PE=4 SV=1) HSP 1 Score: 514 bits (1324), Expect = 9.12e-184 Identity = 263/266 (98.87%), Postives = 264/266 (99.25%), Query Frame = 0
BLAST of Csor.00g277990 vs. ExPASy TrEMBL
Match: A0A5A7U1R1 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00910 PE=4 SV=1) HSP 1 Score: 460 bits (1184), Expect = 1.98e-162 Identity = 237/266 (89.10%), Postives = 249/266 (93.61%), Query Frame = 0
BLAST of Csor.00g277990 vs. ExPASy TrEMBL
Match: A0A1S3BI48 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 OS=Cucumis melo OX=3656 GN=LOC103490311 PE=4 SV=1) HSP 1 Score: 460 bits (1184), Expect = 1.98e-162 Identity = 237/266 (89.10%), Postives = 249/266 (93.61%), Query Frame = 0
BLAST of Csor.00g277990 vs. ExPASy TrEMBL
Match: A0A6J1C3K0 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 OS=Momordica charantia OX=3673 GN=LOC111008032 PE=4 SV=1) HSP 1 Score: 460 bits (1183), Expect = 2.81e-162 Identity = 234/266 (87.97%), Postives = 249/266 (93.61%), Query Frame = 0
BLAST of Csor.00g277990 vs. TAIR 10
Match: AT4G38800.1 (methylthioadenosine nucleosidase 1 ) HSP 1 Score: 353.2 bits (905), Expect = 1.8e-97 Identity = 173/255 (67.84%), Postives = 216/255 (84.71%), Query Frame = 0
BLAST of Csor.00g277990 vs. TAIR 10
Match: AT4G34840.1 (Phosphorylase superfamily protein ) HSP 1 Score: 346.7 bits (888), Expect = 1.7e-95 Identity = 170/244 (69.67%), Postives = 206/244 (84.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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