Csor.00g277860 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTCCGTTTGCCTAGAATTGTTCATGCTAAGAGAAGTTTTCAAGGATCTTCATCAACAGGGAACGGAGCATCGTCAAAGGCCGTCGATGTTCCAAAGGGCTACTTTACCGTTTATGTTGGTGAAGCACAAAAGAAGCGTTTTGTCATTCCACTATCTTACTTGAACCGGCCTTCTTTTCAAGATTTGTTGAGTCGAGCAGAAGAAGAATTTGGATATGATCACCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGAAGAGTTCCTCCTCGATCTCACTCGGAGTTTGAATGACTCGTGA ATGGGTTTCCGTTTGCCTAGAATTGTTCATGCTAAGAGAAGTTTTCAAGGATCTTCATCAACAGGGAACGGAGCATCGTCAAAGGCCGTCGATGTTCCAAAGGGCTACTTTACCGTTTATGTTGGTGAAGCACAAAAGAAGCGTTTTGTCATTCCACTATCTTACTTGAACCGGCCTTCTTTTCAAGATTTGTTGAGTCGAGCAGAAGAAGAATTTGGATATGATCACCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGAAGAGTTCCTCCTCGATCTCACTCGGAGTTTGAATGACTCGTGA ATGGGTTTCCGTTTGCCTAGAATTGTTCATGCTAAGAGAAGTTTTCAAGGATCTTCATCAACAGGGAACGGAGCATCGTCAAAGGCCGTCGATGTTCCAAAGGGCTACTTTACCGTTTATGTTGGTGAAGCACAAAAGAAGCGTTTTGTCATTCCACTATCTTACTTGAACCGGCCTTCTTTTCAAGATTTGTTGAGTCGAGCAGAAGAAGAATTTGGATATGATCACCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGAAGAGTTCCTCCTCGATCTCACTCGGAGTTTGAATGACTCGTGA MGFRLPRIVHAKRSFQGSSSTGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNRPSFQDLLSRAEEEFGYDHPMGGITIPCSEEEFLLDLTRSLNDS Homology
BLAST of Csor.00g277860 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.6e-27 Identity = 63/100 (63.00%), Postives = 78/100 (78.00%), Query Frame = 0
BLAST of Csor.00g277860 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.2e-25 Identity = 62/100 (62.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of Csor.00g277860 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.6e-25 Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of Csor.00g277860 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 5.8e-25 Identity = 59/90 (65.56%), Postives = 68/90 (75.56%), Query Frame = 0
BLAST of Csor.00g277860 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 7.6e-25 Identity = 59/90 (65.56%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of Csor.00g277860 vs. NCBI nr
Match: KAG6572083.1 (hypothetical protein SDJN03_28811, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 206 bits (523), Expect = 7.95e-67 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Csor.00g277860 vs. NCBI nr
Match: KAG6572086.1 (hypothetical protein SDJN03_28814, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202 bits (515), Expect = 1.32e-65 Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Csor.00g277860 vs. NCBI nr
Match: XP_022952254.1 (auxin-induced protein X10A-like [Cucurbita moschata]) HSP 1 Score: 194 bits (494), Expect = 2.12e-62 Identity = 95/101 (94.06%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of Csor.00g277860 vs. NCBI nr
Match: XP_022969518.1 (auxin-induced protein X10A-like [Cucurbita maxima]) HSP 1 Score: 184 bits (466), Expect = 3.83e-58 Identity = 90/101 (89.11%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Csor.00g277860 vs. NCBI nr
Match: XP_022952258.1 (auxin-induced protein X15-like [Cucurbita moschata]) HSP 1 Score: 182 bits (462), Expect = 1.51e-57 Identity = 89/101 (88.12%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Csor.00g277860 vs. ExPASy TrEMBL
Match: A0A6J1GL57 (auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454983 PE=3 SV=1) HSP 1 Score: 194 bits (494), Expect = 1.02e-62 Identity = 95/101 (94.06%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of Csor.00g277860 vs. ExPASy TrEMBL
Match: A0A6J1I180 (auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468494 PE=3 SV=1) HSP 1 Score: 184 bits (466), Expect = 1.86e-58 Identity = 90/101 (89.11%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Csor.00g277860 vs. ExPASy TrEMBL
Match: A0A6J1GK20 (auxin-induced protein X15-like OS=Cucurbita moschata OX=3662 GN=LOC111454988 PE=3 SV=1) HSP 1 Score: 182 bits (462), Expect = 7.33e-58 Identity = 89/101 (88.12%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Csor.00g277860 vs. ExPASy TrEMBL
Match: A0A6J1GL91 (auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE=3 SV=1) HSP 1 Score: 178 bits (452), Expect = 2.54e-56 Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 0
BLAST of Csor.00g277860 vs. ExPASy TrEMBL
Match: A0A6J1GJW5 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=3 SV=1) HSP 1 Score: 177 bits (450), Expect = 5.12e-56 Identity = 89/101 (88.12%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Csor.00g277860 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 119.4 bits (298), Expect = 1.7e-27 Identity = 56/100 (56.00%), Postives = 75/100 (75.00%), Query Frame = 0
BLAST of Csor.00g277860 vs. TAIR 10
Match: AT2G21200.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 105.1 bits (261), Expect = 3.3e-23 Identity = 44/66 (66.67%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Csor.00g277860 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 104.8 bits (260), Expect = 4.3e-23 Identity = 45/79 (56.96%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of Csor.00g277860 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 104.0 bits (258), Expect = 7.3e-23 Identity = 46/74 (62.16%), Postives = 62/74 (83.78%), Query Frame = 0
BLAST of Csor.00g277860 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 102.8 bits (255), Expect = 1.6e-22 Identity = 44/79 (55.70%), Postives = 62/79 (78.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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