Csor.00g276810 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g276810
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	small RNA degrading nuclease 5-like
Location	Csor_Chr01: 8627302 .. 8634614 (-)
RNA-Seq Expression	Csor.00g276810
Synteny	Csor.00g276810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTCTTCCGGTGTTTCAGCCTTGGATTCAGAAGAAGAAGGCAGGTCGAATGTGGGTAAAACAAAGGAGAACCCCAGCTTCTTCGATATATATGGAACCGATGTATGTATTGTTAGTTCATCATTCAGCTATTCCATTTGCTTTTTTCAAATTCTTCAAGCCGTTGCCTCTTATTTTTTCCCGTTATTTTCATCTTCTTTATATTTATTGATTACTGTTGTTGTTATTTTGCTTGAATTTTATGTTCTGAAACAATATAGAAACGGATGACATGGTGCATTCTGCTACTTTGATTCCTCTTGTAGGCCAAAGCTGAGATTCTTTTCAAAACTCCTGAGTCTAATTCAACTTTAAGTCTGCAAGTGAGTTTACTTGGTTGCTAAGATTCTTGTGATTTGAAGACAGAATTGGTTATGAGATTTTTTTTTGAGTATCACTTATGTTTTTCTGCAGGATGTTCAAGGGCTTGTAACTTGGGTGCTTGCTGAGGGTTTCATGCCATCATGGGTTTTCATTAAGGTCGATACTTTTCCTAACTTTAGGTTATTTATATGTCTTACTTGAATTTTGTGTGAGCAATAAAAATCTGATCATGAACGTATTGTTATTCAATAGAAATCAAAATTTGGTGATATTTGTCAATTTAAAGGTCTATGACCTAAATATTTTTGAGCTATATTCATCATTTGTTTCCTACTTCCCTTCTTCAATTGTTGAGCTATATCTCCATAGGAATGTGACCAGGAGGTAAACCTTACTGGGATCTTGGTGTTCTATTGTTTCTCTCGAAAATTTACGTGCATGCTTATTTTTTTAAACTTTGATTGTTAGTTATCTAAGGTTGTTAATTTGATGGCTTACTTTTGCTCCAAATGTTTCCTGGAAGTACTTACAGAGTTAAATATATGCAGAATAAACCCCTGATCCCCAAAGTGGTTATGGTTTATCTCCCTGGCCTGGATGCTGCTCTGTACATGTCACAGACCAAGATACTTCCTACGTTTAAAAAATTGTGCGGCAATCCGAGGGCAGTTTTAGCTCTTAGGTGCTCATTCTTTCATTGAAGTTTGGAAGTTTTTATTCTATTTACCTTTTAGAATGTTTCTGGGATTTTCTTAATGCTACAGTTCTCATGTTGTTATTTTTTATTTTTTTGCTAGCTGTATATCAGATAGAATGCAAACAATTGATGCACTTTTGACATGTAAGGTAAAGAGAAAGAGGGATGCAAATAGTGTAGACTTAAAGAATAATTTGACGTCTGAACAAGGTTTGTAAACCATTTGGCAAACTTTAGTTTTGGTCTAGTTGTCCAGTTAATTAATTTTCTTGTTGTGCTGTTTTAGAATTCTTTTTACTTCCTTGTAGGAGTAGGGAATTAATGTACTTTATTATAACTATTATTGTTATCCTGCTTACAAATATCTTCGATTTCTTTTATTTCATTTGTTTTTGACATCTTACTGCTCATATTTGTATTATTGTTGATAAGATACTTTGTGGCCCTTCAAAAATCATGAAAAGGTTCTTTAAAATTTCACATATCTAGCTTTTTTTTTTTTTTTTTTTTTTGTGGAACTTGGAGCCCAAGAGAAATATAGACGTAATTAACAACTTTTTTTTGTAGGAAACATTGAATATTAAAAAGGAAAGAAAGCAAAACCTCAAACTAAGAAAGATTAGAGAAGTTTCTTCCAGGCTTAAGGACCATTTAAACTATTGTTGTTAGAAAGCAACATAAATTTTACATCAAAATAGAGCCGCAAAATAAATGGTATCAAAGAAACTATCAATAGTCTTTTCTATATTGTTAAATGTCCTATTCTTCCTCTCAAGCCACGGAAACTCCTTTAACTTTTTGGAAGGATAGCTAGCCATGGTAGTGGAGAGCAGGTCGTTTAAGCTGTAAGGTAGAGCCATACGCCAATTGAAGGAAGAAAGTAAGAAGGTCCAAGACTTACATACAACGCTTGAAGGTGCATTTAAGGAAAGCATGTTTTTGCGATTCTACCTCCTCCTTGCACAAAAATGTTAAGCTGATTTGTTTATATGTGGAATGCTTATGTTGCATCTATTCAATTCATATGCTTTATCGGCTGCTTAGTCTGTAAAGGCTCAATAATTCTCTTAATTATTTGATACAATGCATTACTAATAGTTTCTTTGTAGAATTTTATCTGACGACCTGCCTCATATTTGATTGAGTTAATCATTTAATTTTTTTGACTTTTATTAGTGTGTGACCTGTGAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGATATGGAAGGACAGGTATGCACTTTATCTCTGCTTCAGTTAATTGCCTTAATGAAAGCATTGAATTTTTGTGAGGAAACTTAACTGGTGCTTTGAAGACTTTAAATCAAGTACTTGATAATTCTTATCTGAAAAAAATAATCAAGAACCGTATAGTTAATATGGCGACCATCTTGCTAAGTTAATTTAGTTATCCATATCTTTATCCTTTCTCAGGTTATGCTTCTTTTTAATGTTAAAATGTGTATTTAATAAACTAAAGTCACTGTATTTTACCTCAGAGGCATACAGGTCCTGTTTGTTTAACTGAAGTTTTAGACCAGCTATTTTCAGTTTTGGGTTAACAAAGTATTATCAACTTTTATTTTTGTGATTTCTGTATTTGATTTTGTTTTTAGACCACTGTGTTTTACTTCTACATGTCCCATTCTTTTTGATTTATTACCTTTTTATCTCAGGTTGTCCTTGACAAATTGGTAAAACCATCAAATGCAATTGTTGATTACAATACGAGGTAAGATAGTCGAGCTTTTAGTATCAATTCACAAAAGGCTTTTAATATCAATTCTCATAAAAAGAATATGTCACCAAGAAAAGTTGATGTGAAAATCTTAGTTTCCTGTATTTGATTGATAGTGATGATTTATGAAGCCACTTTAGTTATATTGCATGGTTTACTCTTCTTTAAATTGCTTGCATTTGGTAATTATGCTTGTTTTTCTTATTAGTGGGCAAGTGGCTATGCTTTTCAATCTGGCGATTTCTCTATTCTTTTTTCTCCCTCGTTTTTTTTTTCTTTTTATAATTCTTTTTCCTCTGATAGGAAAAAGACTTGTTATTCATAGTGAAAAGAACACCACTGGCTGAAGGAGATTAGAAAGTACTGCCCTCAGTTGGAAAGTAATCGGAAAGAGTTGGTAAAGGCTAAAGAGTACATCATTGAGAAAATAACTAGTAAAAGCTTTATGGTACACCATTGAGATGCTGCTGAGTTTAGCAAACTCCCAGAGCTCGTACCCTTTTGTGGCAATGTTCCGTCTAAGGATCTTGTCTTCCCATCTAAATTTTCCCAAGGTTGGACATCACGACATTGACCCAGAGTGATATGAACCAAGGCATCTGTAATGGCCTAAGCCCACTGCTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTTAAGGCTTTAAAACGCGTCTGCTAAGGAAAAGTTTCCACACCCTTATAAAGAGTATTTCGTTCTCCTCCCCAACCAATGTGGGATTCTCACAATTCACCCCCCTTCAGGGCCCAGCGTCCTCGCTGGCACTCGTTCATTTCTCCAATTGATGTGGGACCCCACCAAATCCACTCTCCTCTTTGGGCTCAGCGTCCTTGCTGGCACATCATCTCGTGCTTAAGAAACAACTTCTTCGCTGGTACATCGTCTAGTGTCTGGCTCTGATATCATTTGTAACACCCCTAATTTTTTTAACCTACATAGTGACGTCACCCATGCATACGTAAATCATAAAGCGGGAATTCATAATAAATAGTTTTGGAAACAACACCAAGGTCTTACATAAAAGTTCAAAAACTCGAAATGAACATATCTCAGAATAAGAAAACATTCGTTAACTGAAAACAGAAAATTTAAATAAAACAAACATTCATTGATTTGACTTAAAAAACCAATTAAAACATGAGCGACCCAAGAATGCCCTTTCATCAACTTCCATGGTATCCTTAGCCTCCTCCGTCACCCGTGCATAGGTGCCTTGCCTTTACCTGAAAAATTTAGGTAGCACGTAGCTTGAGTATTATATGAAATACTTAGTAAGTCACCCCACTATTGAGGTTAGATATGCAAACACATGTAACATATGAGTGGGACCTATCTTTCATCAATCATGGCCTAGGGCTATTTTCTTTTCTGGGTAGGGTTGGATGTATGCTACTCCTCCATACACGGCCCTTGTATGCGCACATGGGTCCACTAGGCGGGCTCGTATACATGCTCCCTGGGTCTGGCTTGGTCGGGCACAACATATTACACGTTACTGAATGCCACATAACAGAAAAAGCTCGCATGATATCGTGGCGAAACATAGATATCGAATTCTTAGTTTCATGACATAAAAAGGAAGTATCCCGATGCAAATGACATACAAATATGCATGAGGTCCCATGACTTTACGTTTCTTAACATAACATGTAATACAAAATACGTTTAATTTCCTTCATGCATTTCATAACATAGCTCAACAACGCTAAGTGTATGCATGACTATGTTCATCATATTCATAGTATGTAATACTAACATAACATCCATTACATTTCAGTTCATTTCATAACATTATCAGAAAACATAATTGATGCATAACATGGACATTTCTCATAAAATATGGTGCATGCAAAAGCCATAGGACACGCACCAACATACAACATATATTAGGTTAACTCTAACAGTAAAGTCACTTACCTCGTTGGCTTTGGCCAAAGTTTACTCATAGTATTAGCATATGAAGGGTATATTAGTAATTAGATTGGAAAGTCGTTATGGAGATATAGTTATAAATATAGTCTAAATGTTTGTCTTTTGTGGCTTAACAGGTTTAGTGGAATTACATTTGAGATGTTACGTCAGGTGACCACTAGTCTGGAAGATGTTCAGGTTCTCTATTTGACACTGCACTCACTGATGTTATCTACTTGCAGTAATCAGTTTCTGATGGAACTTTCTAATGCACTGTGGTAAATGTACACCGCAGAAAGTTTTTTTGAATCTAGTTCACAAGGAGACCGTTCTAATTGGTCATTCACTGGAGAATGACCTGATGGCATTAAAGATCTCTCATGATCTGGTGATTGATACTGCAGTACTGTATAAGCATCCCCGTGGCGGCTCTCATAAATCTGCCCTTCGAATCCTTACCAAAAAATTTCTTTCCAGGGAGATACAACAATCTGGCAATGGCCATGATAGTATTGAAGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGTAAGTGACATTCTACTGGCAATATATTTATGGAGAACACAGTTTGATTGTTCTCTCTGAAGTTCCTCAGGAATATTTCTGGTTACAGTTCATGACGGGTCTTCAGAATAACTTAATGTGAAAGTAGCATTTGTTTCAAGTAATTTAGTGTTTAATTTAATATGCAATCTTGCAACTTCATTTATTGCTGCGAAAAAGCCTAATTGAGTTTCATGTTTGATGTACTCATTAGTTGTGCTGCATGTAAGTGCCATGGTATTGCTGTGAGGATAAAAATCGACCTATTCGTACGTAAAATACTGAATAGAGTTTGGTCCTTCAAAATCACCTTACGTTGTGTTATATATAAATCGCCAAATTCTGCAGAGTTCTTATTGAATGCCTTCTCTCTTGTTTTCTATCAGGACCCGAGTTCGGTTCACCTCCATCATTAATCCGTGAAAAAACTACTTACTGTACTTGGTGAGAGTGGAAAGATGTCTTCTTTCATCGACGATGTTTCAACGGTGAAGCGATATTCCTCGGAATCATCGCATGCATTTCCTGTAACTTCTGATGATGAAGCTCTTTCAAGGGCGAAAAAAGAGGTTGGCATGGCGCTGATGGTATTTGACTGAAATTTCTTTTATAAACTGATATCTAACTAGTTTGTTTGTGGCTATTAGGTAATGAATGAAAGAGTACACTTCATATGGACACAATTTTCGGAATTGAATTCTTACCATAAGAAGCAAGTAGATGATGAAGAAAGATTGAATGTCAAGCTTGCAGAGTTATTGTCATTACTTACATGTGATTCAAAATCTGTAAACAAGAAAAGGAACAGCCGCAAAATCTCTGTTGAACTACGGGAAATTTTGAGCCGCATGGATTCCAGAATCAAGGACCTTTATACCTCGTTACCTACTAATGCTATGCTTATTGTTTGCACTGGTCACGGTGACATAGCACTTGTACAGAGGTATGTGCTTTCCTTTCCATTTATCATGGTAAATTCTTACTGCTTCCAAATATCAGAGTTTCTGGTTGATAGAATGACAAATGATAGCAAAGAATCTAGCAATTATTAGAACATGGATGATAGCAATAAATTGTGATGAACTCCTTAAGTGGGCTAACGTCCCTCTTGGCTTTCATTTTCACCATAACCCCAAATCCAAATCTTTTGGGATTTGATCGCAGAAAAGATGAGCAAAAGATTGGGTTGTTGAAGGAACATTAGTAGTGGTGGGAATCCACAACCTTTAGTTGGTTATAACTCTCCATATAATAAGAAGAGTAGCATTCTTTTACACAGTCTTCAAATTTAGAGTGCCACAACTGGAGGATTTAGTAGTAGCCTATGATAACCACACGGAGAGTTTGCCATATATCGGGGTGGAAGATGGAGTCGGGGCGGTTTGCTGCGGAGCCTGATGCAAGCCTTCCTTAGACGGAATTCATATTTCAGTAGAACACGGGAGAGCTTTGACTATTCCAAATTCACTGTTTTGAGGTGTTGGTCGAGATAGGTTGGGTAGGGCCCCAAAGGTAGTTGCCCCATCTATCTCTCCTCCACCCTTTCCCGTAATATAGAGTTCCACAGTTTTTATGGAAAGTCACTAAGGTGGAGTCATTTTGGGTCTGTTTGACATGACATTTTAAATATTTAAAAAAGTGTTTTCAAGCGCTTGAAAAGTCATTCCATGCCCAAAGCATGCGTGGTTTGGTACAATCATCTACAATATCTCGTGTAGGTCATCAATGCCATAAAGTTTGAATCTATCCTCCCGACATACTTTATAGCTTTCATTTCAAATCATAATGATTTTGCTATTGTTTTTCTGGGAACAATATTAAACGTTTTGACATTTGTGTATGGAGACAGATTGAGGAAAATGCTAAAGGAGCAAAGTGAAACAATGATATGCCGTGAGAAGATTGTCAAAATCTTGGAAGAGCTCCATGCCCAAGCTGAAGTAGCTCTCTGTTTTGCTTCTATAAAGCATTCATCGTTACTCTAA

mRNA sequence

ATGCCGTCTTCCGGTGTTTCAGCCTTGGATTCAGAAGAAGAAGGCAGGTCGAATGTGGGTAAAACAAAGGAGAACCCCAGCTTCTTCGATATATATGGAACCGATGCCAAAGCTGAGATTCTTTTCAAAACTCCTGAGTCTAATTCAACTTTAAGTCTGCAAGATGTTCAAGGGCTTGTAACTTGGGTGCTTGCTGAGGGTTTCATGCCATCATGGGTTTTCATTAAGAATAAACCCCTGATCCCCAAAGTGGTTATGGTTTATCTCCCTGGCCTGGATGCTGCTCTGTACATGTCACAGACCAAGATACTTCCTACGTTTAAAAAATTGTGCGGCAATCCGAGGGCAGTTTTAGCTCTTAGCTGTATATCAGATAGAATGCAAACAATTGATGCACTTTTGACATGTAAGGTAAAGAGAAAGAGGGATGCAAATAGTGTAGACTTAAAGAATAATTTGACGTCTGAACAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGATATGGAAGGACAGGTTGTCCTTGACAAATTGGTAAAACCATCAAATGCAATTGTTGATTACAATACGAGGTTTAGTGGAATTACATTTGAGATGTTACGTCAGGTGACCACTAGTCTGGAAGATGTTCAGAAAGTTTTTTTGAATCTAGTTCACAAGGAGACCGTTCTAATTGGTCATTCACTGGAGAATGACCTGATGGCATTAAAGATCTCTCATGATCTGGTGATTGATACTGCAGTACTGTATAAGCATCCCCGTGGCGGCTCTCATAAATCTGCCCTTCGAATCCTTACCAAAAAATTTCTTTCCAGGGAGATACAACAATCTGGCAATGGCCATGATAGTATTGAAGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGACCCGAGTTCGGTTCACCTCCATCATTAATCCGTGAAAAAACTACTTACTGTACTTGGGCGAAAAAAGAGGTAATGAATGAAAGAGTACACTTCATATGGACACAATTTTCGGAATTGAATTCTTACCATAAGAAGCAAGTAGATGATGAAGAAAGATTGAATGTCAAGCTTGCAGAGTTATTGTCATTACTTACATGTGATTCAAAATCTGTAAACAAGAAAAGGAACAGCCGCAAAATCTCTGTTGAACTACGGGAAATTTTGAGCCGCATGGATTCCAGAATCAAGGACCTTTATACCTCGTTACCTACTAATGCTATGCTTATTGTTTGCACTGGTCACGGTGACATAGCACTTGTACAGAGATTGAGGAAAATGCTAAAGGAGCAAAGTGAAACAATGATATGCCGTGAGAAGATTGTCAAAATCTTGGAAGAGCTCCATGCCCAAGCTGAAGTAGCTCTCTGTTTTGCTTCTATAAAGCATTCATCGTTACTCTAA

Coding sequence (CDS)

ATGCCGTCTTCCGGTGTTTCAGCCTTGGATTCAGAAGAAGAAGGCAGGTCGAATGTGGGTAAAACAAAGGAGAACCCCAGCTTCTTCGATATATATGGAACCGATGCCAAAGCTGAGATTCTTTTCAAAACTCCTGAGTCTAATTCAACTTTAAGTCTGCAAGATGTTCAAGGGCTTGTAACTTGGGTGCTTGCTGAGGGTTTCATGCCATCATGGGTTTTCATTAAGAATAAACCCCTGATCCCCAAAGTGGTTATGGTTTATCTCCCTGGCCTGGATGCTGCTCTGTACATGTCACAGACCAAGATACTTCCTACGTTTAAAAAATTGTGCGGCAATCCGAGGGCAGTTTTAGCTCTTAGCTGTATATCAGATAGAATGCAAACAATTGATGCACTTTTGACATGTAAGGTAAAGAGAAAGAGGGATGCAAATAGTGTAGACTTAAAGAATAATTTGACGTCTGAACAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGATATGGAAGGACAGGTTGTCCTTGACAAATTGGTAAAACCATCAAATGCAATTGTTGATTACAATACGAGGTTTAGTGGAATTACATTTGAGATGTTACGTCAGGTGACCACTAGTCTGGAAGATGTTCAGAAAGTTTTTTTGAATCTAGTTCACAAGGAGACCGTTCTAATTGGTCATTCACTGGAGAATGACCTGATGGCATTAAAGATCTCTCATGATCTGGTGATTGATACTGCAGTACTGTATAAGCATCCCCGTGGCGGCTCTCATAAATCTGCCCTTCGAATCCTTACCAAAAAATTTCTTTCCAGGGAGATACAACAATCTGGCAATGGCCATGATAGTATTGAAGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGACCCGAGTTCGGTTCACCTCCATCATTAATCCGTGAAAAAACTACTTACTGTACTTGGGCGAAAAAAGAGGTAATGAATGAAAGAGTACACTTCATATGGACACAATTTTCGGAATTGAATTCTTACCATAAGAAGCAAGTAGATGATGAAGAAAGATTGAATGTCAAGCTTGCAGAGTTATTGTCATTACTTACATGTGATTCAAAATCTGTAAACAAGAAAAGGAACAGCCGCAAAATCTCTGTTGAACTACGGGAAATTTTGAGCCGCATGGATTCCAGAATCAAGGACCTTTATACCTCGTTACCTACTAATGCTATGCTTATTGTTTGCACTGGTCACGGTGACATAGCACTTGTACAGAGATTGAGGAAAATGCTAAAGGAGCAAAGTGAAACAATGATATGCCGTGAGAAGATTGTCAAAATCTTGGAAGAGCTCCATGCCCAAGCTGAAGTAGCTCTCTGTTTTGCTTCTATAAAGCATTCATCGTTACTCTAA

Protein sequence

MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQGFELTRITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHSLENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDARATMELALLKIKHGPEFGSPPSLIREKTTYCTWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKSVNKKRNSRKISVELREILSRMDSRIKDLYTSLPTNAMLIVCTGHGDIALVQRLRKMLKEQSETMICREKIVKILEELHAQAEVALCFASIKHSSLL

Homology

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BLAST of Csor.00g276810 vs. ExPASy Swiss-Prot
Match: Q8L7M4 (Small RNA degrading nuclease 5 OS=Arabidopsis thaliana OX=3702 GN=SDN5 PE=2 SV=2)

HSP 1 Score: 517.7 bits (1332), Expect = 1.4e-145
Identity = 286/557 (51.35%), Postives = 364/557 (65.35%), Query Frame = 0


Query: 13  EEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLVTWVLAEGFMPSW 72
           E+      K+    SFFDIYG +AKAE+ FK+PE  +TL+LQDVQGLVTWVLAEGFMPSW
Sbjct: 15  EDCDDGTDKSNTGNSFFDIYGPEAKAELDFKSPE--TTLNLQDVQGLVTWVLAEGFMPSW 74

Query: 73  VFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLALSCISDRMQTIDA 132
           VFIKNKPLIPKVV++YLPGLDAALY+S +K L + K  CGNP A+LALSC+ D M+TID 
Sbjct: 75  VFIKNKPLIPKVVLLYLPGLDAALYLSHSKTLSSLKSCCGNPMALLALSCVVDEMRTIDT 134

Query: 133 LLTCKVKRKRDANS---------------------VDLKNNL------------------ 192
           +LTCK ++K+   S                     V+L  ++                  
Sbjct: 135 ILTCKGRKKKTVTSSVEPPPLVSSPEACNLMGKSFVELTKDIPFPVSYYTLSQKEMEQNG 194

Query: 193 -------------------------------TSEQGFELTRITLVDMEGQVVLDKLVKPS 252
                                           +++G ELTR+TLVD++GQV+LDKLV P+
Sbjct: 195 YTFEKLELTPTLPAPSGSCPPEIVALDCEMCITKEGLELTRVTLVDIQGQVLLDKLVMPT 254

Query: 253 NAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHSLENDLMALKISHDL 312
           N I DYNTR+SGIT  M+  VTT+L+D+Q+ FL LV KET+L+GHSLENDL++LKISH+L
Sbjct: 255 NPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKISHNL 314

Query: 313 VIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDARATMELALLKIKHGP 372
           VIDTAVLYKHP G S+K+ LRIL KKFL+REIQ+S +GHDS EDA+A M+LALLKIKHGP
Sbjct: 315 VIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKIKHGP 374

Query: 373 EFGSPPSLIRE----------KTT---------------------------YCTWAKKEV 432
           +FGSPP +IR+          KTT                             + A KEV
Sbjct: 375 DFGSPPEVIRKKLLAVLNESGKTTSIIDNINIVKRYASESSNAIPVSSDDEALSKAVKEV 434

Query: 433 MNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKSVNKKRNSRKISVEL 463
            N+R  F+WTQFSELN++ + + DD ++LN +LAE++SLLTC+ KS  KK N   +S E 
Sbjct: 435 KNKRSQFVWTQFSELNAHFQSRADDPQKLNSRLAEMISLLTCNKKSGLKKSN---VSPET 494

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BLAST of Csor.00g276810 vs. ExPASy Swiss-Prot
Match: O94443 (Uncharacterized exonuclease C637.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC637.09 PE=3 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 1.8e-41
Identity = 147/536 (27.43%), Postives = 236/536 (44.03%), Query Frame = 0


Query: 43  KTPESN--STLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ 102
           +T E+N    L + D+Q LV W LA+G  PSWV ++NK +I + V++ +PGL+ + +  Q
Sbjct: 90  QTTENNLQKPLKISDLQELVFWCLADGQAPSWVLVRNKQMIHRAVILLVPGLEPSQFGFQ 149

Query: 103 -------TKILPTF---------------------------------------------- 162
                  + +LP                                                
Sbjct: 150 PVRGNKHSFLLPNLLNENGPIQLPDFCEVFDRAWPTRSPGDRFRVFSPVNAFLQSPLSNE 209

Query: 163 --KKLCGNPRAVLALSCISDRMQTIDALLTCK-------------------VKRKRDANS 222
             KK     RA+ + S  SD + + ++ +  +                   V    D +S
Sbjct: 210 QKKKRDKETRAMASFSKPSDYLMSYESFIEDEYPLHPTVMKGEEVTQPSGWVASAGDFHS 269

Query: 223 VDLKNNL--------TSEQGFELTRITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFE 282
             +   +         +E G E+ R+T+VDM+ +V+ D+ VKP + + DY T++SGIT E
Sbjct: 270 PPINPKILAIDCEMVRTENGLEIARVTIVDMKSEVIYDEFVKPESPVTDYVTQYSGITEE 329

Query: 283 MLRQVTTSLEDVQKVFLNLVHKETVLIGHSLENDLMALKISHDLVIDTAVLYKHPRGGSH 342
            LR VTT L DVQ      V   TVL+GHSL +DL  LK +H  +IDTA +Y H RG   
Sbjct: 330 KLRNVTTVLSDVQSYLKKTVDNNTVLLGHSLNSDLNCLKFTHPHIIDTANIYNHTRGPPS 389

Query: 343 KSALRILTKKFLSREIQQSGN-GHDSIEDARATMELALLKIKHGP--------------- 402
           K +L+ L  K+L REIQ++G  GHDS EDA A ++L  LK+K+GP               
Sbjct: 390 KPSLKWLATKWLRREIQKAGALGHDSAEDALACVDLLKLKVKNGPAFGLFNQDFESIFHR 449

Query: 403 --------------EFGSPPSLI---REKTTYCTWAKKEV-----MNERVHFIWTQFSEL 448
                         ++G+P S I     K+  C    + V     +++  +F+W +F EL
Sbjct: 450 LSRQQPTPLIGAIADYGNPESCIGKAAHKSVSCANDDEVVSAVVSLSDMHNFVWGRFREL 509

[Close]

BLAST of Csor.00g276810 vs. ExPASy Swiss-Prot
Match: P53331 (RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RNH70 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-34
Identity = 124/444 (27.93%), Postives = 203/444 (45.72%), Query Frame = 0


Query: 51  LSLQDVQGLVTWVL-AEGFMPSWVFIKNKPLIPKVVMVYLPGLDA-----------ALYM 110
           + ++DV+ +  ++L AE   P W+ I N+  + K++++++PGL              +  
Sbjct: 65  IGIKDVRDMTQYLLQAENNSPKWIDICNRSSLQKMIVLFIPGLQPDDFENGKNTFNEISD 124

Query: 111 SQTKILP--------TFKKLCGNPRAVL------ALSCISDRMQTIDALLTCKVKRKRDA 170
              K +P        TF  +    +  L       ++    +M+ I+ L   + K+K   
Sbjct: 125 DNFKYIPGEIASTFHTFPVMAPGSKMTLFSPYNSFINVGLSKMEKINKLKELQKKKKITI 184

Query: 171 NSVDLKNN----------------------------------------LTSEQGFELTRI 230
           N + L                                             SEQG  LTRI
Sbjct: 185 NDLVLSEQQLVANDYPLDSGDTNFDTDWVQTVDFTHGGSHIFALDCEMCLSEQGLVLTRI 244

Query: 231 TLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLR-QVTTSLEDVQKVFLNLVHKETV 290
           +LV+ + +V+ ++LVKP   IVDY TR+SGIT E L      +L +VQK  L ++ +  +
Sbjct: 245 SLVNFDNEVIYEELVKPDVPIVDYLTRYSGITEEKLTVGAKKTLREVQKDLLKIISRSDI 304

Query: 291 LIGHSLENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNG-HD 350
           LIGHSL+NDL  +K+ H LV+DTA++Y H  G   K +L+ L++ FL++ IQ   NG HD
Sbjct: 305 LIGHSLQNDLKVMKLKHPLVVDTAIIYHHKAGDPFKPSLKYLSETFLNKSIQ---NGEHD 364

Query: 351 SIEDARATMELALLKIKHGPEFGSPPSLIREKTTYCTWAKKEV-MNERVHFIWTQFSELN 410
           S+EDARA +EL  LKI +G  FG   +     T    +  K V +N+ +    T+     
Sbjct: 365 SVEDARACLELTKLKILNGLAFGIGINTENLFTKLHRFEVKTVLLNDMIIKNHTEDDSKG 424

Query: 411 SYHKKQVDDE------ERLNVKLAELLSLLTC--DSKSVNKKRNSRKISVELREILSRMD 418
              +   DDE      E LN  +  ++  +     S++ NKK      S +   +L  + 
Sbjct: 425 QLIRCVEDDETWTHIHENLNKDVKLIVGRIKNLERSRNYNKKPRKETPSFDASMVLHDIG 484

[Close]

BLAST of Csor.00g276810 vs. ExPASy Swiss-Prot
Match: Q7TT28 (RNA exonuclease 1 homolog OS=Mus musculus OX=10090 GN=Rexo1 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.0e-32
Identity = 72/142 (50.70%), Postives = 97/142 (68.31%), Query Frame = 0


Query: 158  GFELTRITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNL 217
            G ELTR+T+VD + QVV D  VKP N +VDYNTRFSG+T   L   + +L DVQ V L++
Sbjct: 1065 GLELTRVTVVDTDMQVVYDTFVKPDNEVVDYNTRFSGVTEADLVDTSITLRDVQAVLLSM 1124

Query: 218  VHKETVLIGHSLENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQS 277
               +T+LIGHSLE+DL+ALK+ H  V+DT+VL+ H  G  +K +LR L   +L + IQ +
Sbjct: 1125 FSADTILIGHSLESDLLALKVIHGTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDN 1184

Query: 278  GNGHDSIEDARATMELALLKIK 300
             +GH S EDA A M L + KI+
Sbjct: 1185 VDGHSSSEDASACMHLVIWKIR 1206

[Close]

BLAST of Csor.00g276810 vs. ExPASy Swiss-Prot
Match: Q8N1G1 (RNA exonuclease 1 homolog OS=Homo sapiens OX=9606 GN=REXO1 PE=1 SV=3)

HSP 1 Score: 141.0 bits (354), Expect = 3.5e-32
Identity = 71/142 (50.00%), Postives = 96/142 (67.61%), Query Frame = 0


Query: 158  GFELTRITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNL 217
            G ELTR+T+VD +  VV D  VKP N IVDYNTRFSG+T   L   + +L DVQ V L++
Sbjct: 1073 GLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSVTLRDVQAVLLSM 1132

Query: 218  VHKETVLIGHSLENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQS 277
               +T+LIGHSLE+DL+ALK+ H  V+DT+VL+ H  G  +K +LR L   +L + IQ +
Sbjct: 1133 FSADTILIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDN 1192

Query: 278  GNGHDSIEDARATMELALLKIK 300
             +GH S EDA A M L + K++
Sbjct: 1193 VDGHSSSEDAGACMHLVIWKVR 1214

[Close]

BLAST of Csor.00g276810 vs. NCBI nr
Match: KAG6607692.1 (Small RNA degrading nuclease 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 907 bits (2345), Expect = 0.0
Identity = 467/467 (100.00%), Postives = 467/467 (100.00%), Query Frame = 0


Query: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60
           MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV
Sbjct: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60

Query: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120
           TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL
Sbjct: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQGFELTRITLVDMEGQVVLDKLVK 180
           SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQGFELTRITLVDMEGQVVLDKLVK
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQGFELTRITLVDMEGQVVLDKLVK 180

Query: 181 PSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHSLENDLMALKISH 240
           PSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHSLENDLMALKISH
Sbjct: 181 PSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHSLENDLMALKISH 240

Query: 241 DLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDARATMELALLKIKH 300
           DLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDARATMELALLKIKH
Sbjct: 241 DLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDARATMELALLKIKH 300

Query: 301 GPEFGSPPSLIREKTTYCTWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAE 360
           GPEFGSPPSLIREKTTYCTWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAE
Sbjct: 301 GPEFGSPPSLIREKTTYCTWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAE 360

Query: 361 LLSLLTCDSKSVNKKRNSRKISVELREILSRMDSRIKDLYTSLPTNAMLIVCTGHGDIAL 420
           LLSLLTCDSKSVNKKRNSRKISVELREILSRMDSRIKDLYTSLPTNAMLIVCTGHGDIAL
Sbjct: 361 LLSLLTCDSKSVNKKRNSRKISVELREILSRMDSRIKDLYTSLPTNAMLIVCTGHGDIAL 420

Query: 421 VQRLRKMLKEQSETMICREKIVKILEELHAQAEVALCFASIKHSSLL 467
           VQRLRKMLKEQSETMICREKIVKILEELHAQAEVALCFASIKHSSLL
Sbjct: 421 VQRLRKMLKEQSETMICREKIVKILEELHAQAEVALCFASIKHSSLL 467

[Close]

BLAST of Csor.00g276810 vs. NCBI nr
Match: XP_022981433.1 (small RNA degrading nuclease 5-like [Cucurbita maxima])

HSP 1 Score: 828 bits (2139), Expect = 3.31e-299
Identity = 456/576 (79.17%), Postives = 460/576 (79.86%), Query Frame = 0


Query: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60
           MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV
Sbjct: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60

Query: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120
           TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL
Sbjct: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ----------------------- 180
           SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ                       
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERFGPEKETPISIKLPKELPFPV 180

Query: 181 -------------------------------------------------GFELTRITLVD 240
                                                            GFELTRITLVD
Sbjct: 181 TYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHS 300
           MEGQVVLDKLVKPSNAIVDYNTRFSGITFEML QVTTSLEDVQKVFLNLVHKETVLIGHS
Sbjct: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLSQVTTSLEDVQKVFLNLVHKETVLIGHS 300

Query: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360
           LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR
Sbjct: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGPEFGSPPSLIREKTTYC------------------------------ 420
           ATMELALLKIKHGPEFGSPPSLIR+K                                  
Sbjct: 361 ATMELALLKIKHGPEFGSPPSLIRKKLLTILGENGKTSSFIDDVSTVKRYSSESSHAFPV 420

Query: 421 -------TWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 467
                  + AKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS
Sbjct: 421 TSDDEALSRAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 480

[Close]

BLAST of Csor.00g276810 vs. NCBI nr
Match: XP_023525579.1 (small RNA degrading nuclease 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 827 bits (2137), Expect = 6.68e-299
Identity = 455/576 (78.99%), Postives = 459/576 (79.69%), Query Frame = 0


Query: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60
           MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV
Sbjct: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60

Query: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120
           TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKIL TFKKLCGNPRAVLAL
Sbjct: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILSTFKKLCGNPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ----------------------- 180
           SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ                       
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERLDPEKETPISIKLPKELPFPV 180

Query: 181 -------------------------------------------------GFELTRITLVD 240
                                                            GFELTRITLVD
Sbjct: 181 TYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHS 300
           MEGQVVLDKLVKPSNAIVDYNTRFSGITFE+L QVTTSLEDVQKVFLNLVHKETVLIGHS
Sbjct: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFELLSQVTTSLEDVQKVFLNLVHKETVLIGHS 300

Query: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360
           LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR
Sbjct: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGPEFGSPPSLIREKTTYC------------------------------ 420
           ATMELALLKIKHGPEFGSPPSLIR+K                                  
Sbjct: 361 ATMELALLKIKHGPEFGSPPSLIRKKLLTILGENGKTSSFIDDVSTVKRYSSESSHAFPV 420

Query: 421 -------TWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 467
                  + AKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS
Sbjct: 421 TSDDEALSRAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 480

[Close]

BLAST of Csor.00g276810 vs. NCBI nr
Match: XP_022926206.1 (small RNA degrading nuclease 5-like [Cucurbita moschata])

HSP 1 Score: 827 bits (2136), Expect = 9.48e-299
Identity = 456/576 (79.17%), Postives = 459/576 (79.69%), Query Frame = 0


Query: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60
           MPSSGVSALDSEEEGRS+VGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV
Sbjct: 1   MPSSGVSALDSEEEGRSDVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60

Query: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120
           TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL
Sbjct: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ----------------------- 180
           SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ                       
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERLGPEKETPISIKLPKELPFPV 180

Query: 181 -------------------------------------------------GFELTRITLVD 240
                                                            GFELTRITLVD
Sbjct: 181 TYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHS 300
           MEGQVVLDKLVKPSNAIVDYNTRFSGIT EML QVTTSLEDVQKVFLNLVHKETVLIGHS
Sbjct: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITSEMLSQVTTSLEDVQKVFLNLVHKETVLIGHS 300

Query: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360
           LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR
Sbjct: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGPEFGSPPSLIREKTTYC------------------------------ 420
           ATMELALLKIKHGPEFGSPPSLIR+K                                  
Sbjct: 361 ATMELALLKIKHGPEFGSPPSLIRKKLLTVLGENGKTSSFIDDVSTVKRYSSESSHAFPV 420

Query: 421 -------TWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 467
                  + AKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS
Sbjct: 421 TSDDEALSRAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 480

[Close]

BLAST of Csor.00g276810 vs. NCBI nr
Match: XP_004146782.1 (small RNA degrading nuclease 5 [Cucumis sativus] >KAE8647276.1 hypothetical protein Csa_003184 [Cucumis sativus])

HSP 1 Score: 758 bits (1958), Expect = 1.00e-271
Identity = 411/572 (71.85%), Postives = 437/572 (76.40%), Query Frame = 0


Query: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60
           MPSS VS LDSE++G+SNVGKT+E PSFFDIYG DAKAEILFKTPESNSTLSLQDVQ LV
Sbjct: 1   MPSSSVSGLDSEDDGQSNVGKTQEKPSFFDIYGADAKAEILFKTPESNSTLSLQDVQELV 60

Query: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120
            WVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQ+KILPTFKK CG+PRAVLAL
Sbjct: 61  NWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSE------------------------ 180
           SCISDRMQTIDALLTCKVKRKRDAN VDLKN LTSE                        
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANKVDLKNKLTSEPEISGLEKEAPISIKLPKELPFPV 180

Query: 181 ------------------------------------------------QGFELTRITLVD 240
                                                           +GFELTRITLVD
Sbjct: 181 TYYTLTAKALEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHS 300
           MEG+V+LDKLVKPSNAIVDYNTR+SGIT EML  VTTSLEDVQ++FLNLVHKETVL+GHS
Sbjct: 241 MEGRVLLDKLVKPSNAIVDYNTRYSGITCEMLSGVTTSLEDVQRIFLNLVHKETVLVGHS 300

Query: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360
           LENDLMAL+ISHDLV+DTAVLYKHPRGGSHKSALRIL K+FLSREIQQSGNGHDSIEDAR
Sbjct: 301 LENDLMALRISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGPEFGSPPSLIREKTT---------------------YCTW------- 420
           ATMELALLKIKHGP+FGSPPSLIR+K                       YC+        
Sbjct: 361 ATMELALLKIKHGPDFGSPPSLIRKKLLNILGESGKTSSFIDDIATVKRYCSESSHAFPV 420

Query: 421 ---------AKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 463
                    AKKE MNE+VHFIWTQFSELNSYHKKQVDDEE+LNVKLAELLSLLTCD+KS
Sbjct: 421 TSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQVDDEEKLNVKLAELLSLLTCDTKS 480

[Close]

BLAST of Csor.00g276810 vs. ExPASy TrEMBL
Match: A0A6J1J229 (small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111480556 PE=4 SV=1)

HSP 1 Score: 828 bits (2139), Expect = 1.60e-299
Identity = 456/576 (79.17%), Postives = 460/576 (79.86%), Query Frame = 0


Query: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60
           MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV
Sbjct: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60

Query: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120
           TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL
Sbjct: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ----------------------- 180
           SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ                       
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERFGPEKETPISIKLPKELPFPV 180

Query: 181 -------------------------------------------------GFELTRITLVD 240
                                                            GFELTRITLVD
Sbjct: 181 TYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHS 300
           MEGQVVLDKLVKPSNAIVDYNTRFSGITFEML QVTTSLEDVQKVFLNLVHKETVLIGHS
Sbjct: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLSQVTTSLEDVQKVFLNLVHKETVLIGHS 300

Query: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360
           LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR
Sbjct: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGPEFGSPPSLIREKTTYC------------------------------ 420
           ATMELALLKIKHGPEFGSPPSLIR+K                                  
Sbjct: 361 ATMELALLKIKHGPEFGSPPSLIRKKLLTILGENGKTSSFIDDVSTVKRYSSESSHAFPV 420

Query: 421 -------TWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 467
                  + AKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS
Sbjct: 421 TSDDEALSRAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 480

[Close]

BLAST of Csor.00g276810 vs. ExPASy TrEMBL
Match: A0A6J1EE80 (small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC111433387 PE=4 SV=1)

HSP 1 Score: 827 bits (2136), Expect = 4.59e-299
Identity = 456/576 (79.17%), Postives = 459/576 (79.69%), Query Frame = 0


Query: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60
           MPSSGVSALDSEEEGRS+VGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV
Sbjct: 1   MPSSGVSALDSEEEGRSDVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60

Query: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120
           TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL
Sbjct: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ----------------------- 180
           SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ                       
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERLGPEKETPISIKLPKELPFPV 180

Query: 181 -------------------------------------------------GFELTRITLVD 240
                                                            GFELTRITLVD
Sbjct: 181 TYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHS 300
           MEGQVVLDKLVKPSNAIVDYNTRFSGIT EML QVTTSLEDVQKVFLNLVHKETVLIGHS
Sbjct: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITSEMLSQVTTSLEDVQKVFLNLVHKETVLIGHS 300

Query: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360
           LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR
Sbjct: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGPEFGSPPSLIREKTTYC------------------------------ 420
           ATMELALLKIKHGPEFGSPPSLIR+K                                  
Sbjct: 361 ATMELALLKIKHGPEFGSPPSLIRKKLLTVLGENGKTSSFIDDVSTVKRYSSESSHAFPV 420

Query: 421 -------TWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 467
                  + AKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS
Sbjct: 421 TSDDEALSRAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 480

[Close]

BLAST of Csor.00g276810 vs. ExPASy TrEMBL
Match: A0A5D3DMF7 (Small RNA degrading nuclease 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00380 PE=4 SV=1)

HSP 1 Score: 756 bits (1951), Expect = 5.62e-271
Identity = 410/572 (71.68%), Postives = 434/572 (75.87%), Query Frame = 0


Query: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60
           MPSS VS LDSE+EG+SNVGKT+E P FFDIYG DAKAE+LFKTPESNSTLSLQDVQ LV
Sbjct: 1   MPSSSVSGLDSEDEGKSNVGKTQEKPCFFDIYGADAKAEVLFKTPESNSTLSLQDVQQLV 60

Query: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120
           TWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQ+KILPTFKK CG+PRAVLAL
Sbjct: 61  TWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSE------------------------ 180
           SCISDRMQTIDALLTCKVKRKRDAN VDL N LTSE                        
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANKVDLNNKLTSEPEISGLEKEAPISIQLPKELPFPV 180

Query: 181 ------------------------------------------------QGFELTRITLVD 240
                                                           +GFELTRITLVD
Sbjct: 181 TYYTLTAKQLEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHS 300
           MEGQV+LDKLVKPSNAIVDYNTRFSGIT EML  VTTSLEDVQ+ FLNLVHKETVL+GHS
Sbjct: 241 MEGQVLLDKLVKPSNAIVDYNTRFSGITCEMLSGVTTSLEDVQRDFLNLVHKETVLVGHS 300

Query: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360
           LENDL+ALKISHDLV+DTAVLYKHPRGGSHKSALRIL K+FLSREIQQSGNGHDSIEDAR
Sbjct: 301 LENDLIALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGPEFGSPPSLIREKTTYC------------------------------ 420
           ATMELALLKIKHGP+FGSPPSLIR+K                                  
Sbjct: 361 ATMELALLKIKHGPDFGSPPSLIRKKLLNILGECGKTSSFIDDISTVKRYSSESSHAFPV 420

Query: 421 -------TWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 463
                  + AKKE MNE+VHFIWTQFSELNSYHKKQVDDEE+LNVKLAELLSLLTCD+KS
Sbjct: 421 TSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQVDDEEKLNVKLAELLSLLTCDTKS 480

[Close]

BLAST of Csor.00g276810 vs. ExPASy TrEMBL
Match: A0A1S3CT45 (small RNA degrading nuclease 5 OS=Cucumis melo OX=3656 GN=LOC103504042 PE=4 SV=1)

HSP 1 Score: 756 bits (1951), Expect = 5.62e-271
Identity = 410/572 (71.68%), Postives = 434/572 (75.87%), Query Frame = 0


Query: 1   MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60
           MPSS VS LDSE+EG+SNVGKT+E P FFDIYG DAKAE+LFKTPESNSTLSLQDVQ LV
Sbjct: 1   MPSSSVSGLDSEDEGKSNVGKTQEKPCFFDIYGADAKAEVLFKTPESNSTLSLQDVQQLV 60

Query: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120
           TWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQ+KILPTFKK CG+PRAVLAL
Sbjct: 61  TWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSE------------------------ 180
           SCISDRMQTIDALLTCKVKRKRDAN VDL N LTSE                        
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANKVDLNNKLTSEPEISGLEKEAPISIQLPKELPFPV 180

Query: 181 ------------------------------------------------QGFELTRITLVD 240
                                                           +GFELTRITLVD
Sbjct: 181 TYYTLTAKQLEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHS 300
           MEGQV+LDKLVKPSNAIVDYNTRFSGIT EML  VTTSLEDVQ+ FLNLVHKETVL+GHS
Sbjct: 241 MEGQVLLDKLVKPSNAIVDYNTRFSGITCEMLSGVTTSLEDVQRDFLNLVHKETVLVGHS 300

Query: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360
           LENDL+ALKISHDLV+DTAVLYKHPRGGSHKSALRIL K+FLSREIQQSGNGHDSIEDAR
Sbjct: 301 LENDLIALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGPEFGSPPSLIREKTTYC------------------------------ 420
           ATMELALLKIKHGP+FGSPPSLIR+K                                  
Sbjct: 361 ATMELALLKIKHGPDFGSPPSLIRKKLLNILGECGKTSSFIDDISTVKRYSSESSHAFPV 420

Query: 421 -------TWAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS 463
                  + AKKE MNE+VHFIWTQFSELNSYHKKQVDDEE+LNVKLAELLSLLTCD+KS
Sbjct: 421 TSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQVDDEEKLNVKLAELLSLLTCDTKS 480

[Close]

BLAST of Csor.00g276810 vs. ExPASy TrEMBL
Match: A0A6J1FAZ1 (small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC111443672 PE=4 SV=1)

HSP 1 Score: 746 bits (1925), Expect = 5.65e-267
Identity = 407/575 (70.78%), Postives = 436/575 (75.83%), Query Frame = 0


Query: 1   MPSSGVSALDSEEEGRSNVGKTKEN---PSFFDIYGTDAKAEILFKTPESNSTLSLQDVQ 60
           MPSS VSALD++EEG+SNVG T+E    PSFFDIYGTDAKAE+LFKTPESNSTLSLQDVQ
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAV 120
           GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ+KILPTFK+ CG+PR V
Sbjct: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQ-------------------- 180
           LALSCISDRMQTIDALLTCKVKRKRDANSVDLKN LTSEQ                    
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180

Query: 181 ----------------------------------------------------GFELTRIT 240
                                                               GFELTRIT
Sbjct: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTRIT 240

Query: 241 LVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLI 300
           LVDM GQ+VLDKLVKPSNAIVDYNTRFSGIT EML +VTTSLEDVQK FLNLVHKETVL+
Sbjct: 241 LVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300

Query: 301 GHSLENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIE 360
           GHSLENDLMALKISHDLV+DTAVLYKHPRGGSHKSALRIL K+FLSREIQQS NGH+S+E
Sbjct: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHNSVE 360

Query: 361 DARATMELALLKIKHGPEFGSPPSLIREK------------------TTYCTW------- 420
           DARATMELALLKIKHGPEFGSPPSL+R+K                  +T   +       
Sbjct: 361 DARATMELALLKIKHGPEFGSPPSLVRKKLLNILGESGKTSSFIDDVSTVKRYSSESSHA 420

Query: 421 ------------AKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCD 463
                       AKKE MNERVHF+WTQFSELNSYHKKQ DD+ERLNVKLAELLSL+TCD
Sbjct: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDDERLNVKLAELLSLVTCD 480

[Close]

BLAST of Csor.00g276810 vs. TAIR 10
Match: AT5G25800.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 517.7 bits (1332), Expect = 9.7e-147
Identity = 286/557 (51.35%), Postives = 364/557 (65.35%), Query Frame = 0


Query: 13  EEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLVTWVLAEGFMPSW 72
           E+      K+    SFFDIYG +AKAE+ FK+PE  +TL+LQDVQGLVTWVLAEGFMPSW
Sbjct: 15  EDCDDGTDKSNTGNSFFDIYGPEAKAELDFKSPE--TTLNLQDVQGLVTWVLAEGFMPSW 74

Query: 73  VFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLALSCISDRMQTIDA 132
           VFIKNKPLIPKVV++YLPGLDAALY+S +K L + K  CGNP A+LALSC+ D M+TID 
Sbjct: 75  VFIKNKPLIPKVVLLYLPGLDAALYLSHSKTLSSLKSCCGNPMALLALSCVVDEMRTIDT 134

Query: 133 LLTCKVKRKRDANS---------------------VDLKNNL------------------ 192
           +LTCK ++K+   S                     V+L  ++                  
Sbjct: 135 ILTCKGRKKKTVTSSVEPPPLVSSPEACNLMGKSFVELTKDIPFPVSYYTLSQKEMEQNG 194

Query: 193 -------------------------------TSEQGFELTRITLVDMEGQVVLDKLVKPS 252
                                           +++G ELTR+TLVD++GQV+LDKLV P+
Sbjct: 195 YTFEKLELTPTLPAPSGSCPPEIVALDCEMCITKEGLELTRVTLVDIQGQVLLDKLVMPT 254

Query: 253 NAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHSLENDLMALKISHDL 312
           N I DYNTR+SGIT  M+  VTT+L+D+Q+ FL LV KET+L+GHSLENDL++LKISH+L
Sbjct: 255 NPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKISHNL 314

Query: 313 VIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDARATMELALLKIKHGP 372
           VIDTAVLYKHP G S+K+ LRIL KKFL+REIQ+S +GHDS EDA+A M+LALLKIKHGP
Sbjct: 315 VIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKIKHGP 374

Query: 373 EFGSPPSLIRE----------KTT---------------------------YCTWAKKEV 432
           +FGSPP +IR+          KTT                             + A KEV
Sbjct: 375 DFGSPPEVIRKKLLAVLNESGKTTSIIDNINIVKRYASESSNAIPVSSDDEALSKAVKEV 434

Query: 433 MNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKSVNKKRNSRKISVEL 463
            N+R  F+WTQFSELN++ + + DD ++LN +LAE++SLLTC+ KS  KK N   +S E 
Sbjct: 435 KNKRSQFVWTQFSELNAHFQSRADDPQKLNSRLAEMISLLTCNKKSGLKKSN---VSPET 494

[Close]

BLAST of Csor.00g276810 vs. TAIR 10
Match: AT3G50100.1 (small RNA degrading nuclease 1 )

HSP 1 Score: 110.9 bits (276), Expect = 2.7e-24
Identity = 62/174 (35.63%), Postives = 98/174 (56.32%), Query Frame = 0


Query: 137 KVKRKRDANSVDLKNNLTSEQGFELTRITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGIT 196
           KV    +  +VD +  L  +    L R+ +VD + +V+LD+ VKP+  +VDY T  +GIT
Sbjct: 133 KVMESTNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGIT 192

Query: 197 FEMLRQVTTSLEDVQKVFLNLVHKETVLIGHSLENDLMALKISHDLVIDTAVLYKHPRGG 256
            E +   + S+ D+Q+     +   T+L+GHSL  DL  LKI H  VIDTA+++K+P   
Sbjct: 193 AEDIENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKYPNTR 252

Query: 257 S-HKSALRILTKKFLSREIQQSGNGHDSIEDARATMELALLKIKHGPEFGSPPS 310
              + +L  L K  L  E++++G  HD + DA A M+LAL  ++   +    PS
Sbjct: 253 KLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVEKRVDTTIKPS 306

[Close]

BLAST of Csor.00g276810 vs. TAIR 10
Match: AT5G05540.1 (small RNA degrading nuclease 2 )

HSP 1 Score: 109.4 bits (272), Expect = 8.0e-24
Identity = 57/170 (33.53%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 146 SVDLKNNLTSEQGFELTRITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTT 205
           ++D +  L  +    + R+  VD + +V+LD+ VKP+  +VDY T  +G+T + L + T 
Sbjct: 144 AIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKATI 203

Query: 206 SLEDVQKVFLNLVHKETVLIGHSLENDLMALKISHDLVIDTAVLYKHPRGGSH------K 265
           S+ D+Q+  L  + ++T+L+G SL +DL  LK+ H  VIDT++++K+   G+       +
Sbjct: 204 SVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKR 263

Query: 266 SALRILTKKFLSREIQQSGNGHDSIEDARATMELALLKIKHGPEFGSPPS 310
            +L  L K  L  E+Q+ G  H+ + DA A M+L L  + +G E   P S
Sbjct: 264 PSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILDNGAETSVPLS 313

[Close]

BLAST of Csor.00g276810 vs. TAIR 10
Match: AT5G05540.2 (small RNA degrading nuclease 2 )

HSP 1 Score: 109.4 bits (272), Expect = 8.0e-24
Identity = 57/170 (33.53%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 146 SVDLKNNLTSEQGFELTRITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTT 205
           ++D +  L  +    + R+  VD + +V+LD+ VKP+  +VDY T  +G+T + L + T 
Sbjct: 144 AIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKATI 203

Query: 206 SLEDVQKVFLNLVHKETVLIGHSLENDLMALKISHDLVIDTAVLYKHPRGGSH------K 265
           S+ D+Q+  L  + ++T+L+G SL +DL  LK+ H  VIDT++++K+   G+       +
Sbjct: 204 SVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKR 263

Query: 266 SALRILTKKFLSREIQQSGNGHDSIEDARATMELALLKIKHGPEFGSPPS 310
            +L  L K  L  E+Q+ G  H+ + DA A M+L L  + +G E   P S
Sbjct: 264 PSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILDNGAETSVPLS 313

[Close]

BLAST of Csor.00g276810 vs. TAIR 10
Match: AT5G67240.1 (small RNA degrading nuclease 3 )

HSP 1 Score: 106.7 bits (265), Expect = 5.2e-23
Identity = 56/151 (37.09%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 153 LTSEQGFE-LTRITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQ 212
           +T E G + L R+  VD + +VVLDK VKP   ++DY T  +G+T E L + T S+ D+Q
Sbjct: 153 VTCEDGSQALVRVGAVDRDLKVVLDKFVKPDKPVIDYKTDITGVTAEDLERATLSVADIQ 212

Query: 213 KVFLNLVHKETVLIGHSLENDLMALKISHDLVIDTAVLYKH-PRGGSHKSALRILTKKFL 272
           K     +   T+L+GH L NDL  L+I H  VIDT+ +++      + + +L  L K  L
Sbjct: 213 KKLRRFLSVGTILVGHGLHNDLQVLRIDHARVIDTSYVFEFVDAPKTQRPSLNNLCKSVL 272

Query: 273 SREIQQSGNGHDSIEDARATMELALLKIKHG 302
            +E++  G  H+ + DA A M+L L  ++ G
Sbjct: 273 GQEVRMDGAAHNCVHDAAAAMKLVLAAVEKG 303

The following BLAST results are available for this feature:

BLAST of Csor.00g276810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7M4	1.4e-145	51.35	Small RNA degrading nuclease 5 OS=Arabidopsis thaliana OX=3702 GN=SDN5 PE=2 SV=2	[more]
O94443	1.8e-41	27.43	Uncharacterized exonuclease C637.09 OS=Schizosaccharomyces pombe (strain 972 / A...	[more]
P53331	1.3e-34	27.93	RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=55...	[more]
Q7TT28	2.0e-32	50.70	RNA exonuclease 1 homolog OS=Mus musculus OX=10090 GN=Rexo1 PE=1 SV=1	[more]
Q8N1G1	3.5e-32	50.00	RNA exonuclease 1 homolog OS=Homo sapiens OX=9606 GN=REXO1 PE=1 SV=3	[more]

BLAST of Csor.00g276810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607692.1	0.0	100.00	Small RNA degrading nuclease 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022981433.1	3.31e-299	79.17	small RNA degrading nuclease 5-like [Cucurbita maxima]	[more]
XP_023525579.1	6.68e-299	78.99	small RNA degrading nuclease 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022926206.1	9.48e-299	79.17	small RNA degrading nuclease 5-like [Cucurbita moschata]	[more]
XP_004146782.1	1.00e-271	71.85	small RNA degrading nuclease 5 [Cucumis sativus] >KAE8647276.1 hypothetical prot...	[more]

BLAST of Csor.00g276810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J229	1.60e-299	79.17	small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111480556 ...	[more]
A0A6J1EE80	4.59e-299	79.17	small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC11143338...	[more]
A0A5D3DMF7	5.62e-271	71.68	Small RNA degrading nuclease 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CT45	5.62e-271	71.68	small RNA degrading nuclease 5 OS=Cucumis melo OX=3656 GN=LOC103504042 PE=4 SV=1	[more]
A0A6J1FAZ1	5.65e-267	70.78	small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC11144367...	[more]

BLAST of Csor.00g276810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25800.1	9.7e-147	51.35	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G50100.1	2.7e-24	35.63	small RNA degrading nuclease 1	[more]
AT5G05540.1	8.0e-24	33.53	small RNA degrading nuclease 2	[more]
AT5G05540.2	8.0e-24	33.53	small RNA degrading nuclease 2	[more]
AT5G67240.1	5.2e-23	37.09	small RNA degrading nuclease 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 143..303 e-value: 2.1E-33 score: 127.0
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 160..293 e-value: 3.7E-8 score: 34.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 142..303 e-value: 2.2E-49 score: 169.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR12801:SF115	LD29573P	coord: 20..152 coord: 156..448
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 20..152 coord: 156..448
IPR034922	RNA exonuclease 1-like, exonuclease domain	CDD	cd06145	REX1_like	coord: 156..295 e-value: 1.00338E-82 score: 250.095
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 155..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g276810.m01	Csor.00g276810.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0003676	nucleic acid binding