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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGATCGGTTTCTTACACAAGATCAGACCAAAAGAATTTCAAGAAGAAACTCAAGAAGCTTCCGTGGTTATCATCACCAACACCACAGGATCAGACCCCGCGGAATCCACCACTCCTTCCGTTTCTTACCTCAAGGTCCCAACGTTCTTTCTCAAAAAAAAAAAAAAAACCTTCCGAAAAAAAGATTCGATTACTGCACCGATAACATCAAGGAAAAAGAAAAACTCCATCGAGATCGAGAAGAAGAAGTGGCTCGCTGAAGTTGCCTCCATGTTCTGCAAAATCTTCGGCGGAGGAAAAAACTCTCTGCCTGCGGAATCGGAGGTAAAATCGATGGAGATGATGATGATTTTTGAGCGAATCGGAAGCGGGAGATGA mRNA sequence ATGGAGATCGGTTTCTTACACAAGATCAGACCAAAAGAATTTCAAGAAGAAACTCAAGAAGCTTCCGTGGTTATCATCACCAACACCACAGGATCAGACCCCGCGGAATCCACCACTCCTTCCGTTTCTTACCTCAAGGTCCCAACGTTCTTTCTCAAAAAAAAAAAAAAAACCTTCCGAAAAAAAGATTCGATTACTGCACCGATAACATCAAGGAAAAAGAAAAACTCCATCGAGATCGAGAAGAAGAAGTGGCTCGCTGAAGTTGCCTCCATGTTCTGCAAAATCTTCGGCGGAGGAAAAAACTCTCTGCCTGCGGAATCGGAGGTAAAATCGATGGAGATGATGATGATTTTTGAGCGAATCGGAAGCGGGAGATGA Coding sequence (CDS) ATGGAGATCGGTTTCTTACACAAGATCAGACCAAAAGAATTTCAAGAAGAAACTCAAGAAGCTTCCGTGGTTATCATCACCAACACCACAGGATCAGACCCCGCGGAATCCACCACTCCTTCCGTTTCTTACCTCAAGGTCCCAACGTTCTTTCTCAAAAAAAAAAAAAAAACCTTCCGAAAAAAAGATTCGATTACTGCACCGATAACATCAAGGAAAAAGAAAAACTCCATCGAGATCGAGAAGAAGAAGTGGCTCGCTGAAGTTGCCTCCATGTTCTGCAAAATCTTCGGCGGAGGAAAAAACTCTCTGCCTGCGGAATCGGAGGTAAAATCGATGGAGATGATGATGATTTTTGAGCGAATCGGAAGCGGGAGATGA Protein sequence MEIGFLHKIRPKEFQEETQEASVVIITNTTGSDPAESTTPSVSYLKVPTFFLKKKKKTFRKKDSITAPITSRKKKNSIEIEKKKWLAEVASMFCKIFGGGKNSLPAESEVKSMEMMMIFERIGSGR
Homology
BLAST of Csor.00g276690 vs. NCBI nr
Match: KAG6607704.1 (hypothetical protein SDJN03_01046, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240 bits (613), Expect = 9.37e-80 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query: 1 MEIGFLHKIRPKEFQEETQEASVVIITNTTGSDPAESTTPSVSYLKVPTFFLKKKKKTFR 60
MEIGFLHKIRPKEFQEETQEASVVIITNTTGSDPAESTTPSVSYLKVPTFFLKKKKKTFR
Sbjct: 1 MEIGFLHKIRPKEFQEETQEASVVIITNTTGSDPAESTTPSVSYLKVPTFFLKKKKKTFR 60
Query: 61 KKDSITAPITSRKKKNSIEIEKKKWLAEVASMFCKIFGGGKNSLPAESEVKSMEMMMIFE 120
KKDSITAPITSRKKKNSIEIEKKKWLAEVASMFCKIFGGGKNSLPAESEVKSMEMMMIFE
Sbjct: 61 KKDSITAPITSRKKKNSIEIEKKKWLAEVASMFCKIFGGGKNSLPAESEVKSMEMMMIFE 120
Query: 121 RIGSGR 126
RIGSGR
Sbjct: 121 RIGSGR 126
BLAST of Csor.00g276690 vs. NCBI nr
Match: KAG6592883.1 (hypothetical protein SDJN03_12359, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 151 bits (382), Expect = 1.95e-42 Identity = 86/103 (83.50%), Postives = 90/103 (87.38%), Query Frame = 0
Query: 1 MEIGFLHKIRPKEFQEETQEASVVIITNTTGSDPAESTTPSVSYLKVPTFFLKKKKKTFR 60
MEIGFLHKIRPKEFQEETQEASVVIITNTTGSDPAESTTPSVSYLKVPTFFLK +K F
Sbjct: 1 MEIGFLHKIRPKEFQEETQEASVVIITNTTGSDPAESTTPSVSYLKVPTFFLKPFRKRF- 60
Query: 61 KKDSITAPITSRKKKNSIEIEKKKWLAEVASMFCKIFGGGKNS 103
D T I ++K+NSIEIEKKKWLAEVASMFCKIFGGGK S
Sbjct: 61 --DYCTDNI--KEKENSIEIEKKKWLAEVASMFCKIFGGGKLS 98
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAG6607704.1 | 9.37e-80 | 100.00 | hypothetical protein SDJN03_01046, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6592883.1 | 1.95e-42 | 83.50 | hypothetical protein SDJN03_12359, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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