Csor.00g276680 (gene) Silver-seed gourd (wild; sororia) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGAAGACATCAATTCAAATCCGGTGCTTAATTCTATAGAAGGAGAGTTGTGGAGTAAATGGTCGCACCGTGAAGATATCTTATGGAGGGCTATCAGTTCTTTTTCTGGCTGGGGCAGGGTCATTATGAGGACTTTAAAGGGTAAAGTCCATTGGAAAAATTACTCTTCAACAGATATGACGAAGAGTAGGACCAAGCTCTGTAGGGGTTTTTTGCCTTCTAGACATCATGCTGCTTTGTTGGCATGGCCTGTACTATCCCAATTTTGTTAGAGAGTTACTAGATTCGGATTGAAACAGATCTGTGGTGGTGTTATTAGCACTGGCATTCTCAAGGGAAGCTGAAGTCCTGTGATCACGTCGATTGTGGGTTCGCAGGGACGAACCGGTAGTTCGTATGCTGGCAGAATTAGGAACAATGCAAGTCTCTGAGCAAACAGACATGCTAAGAGTCCTTGGGATTGCGAACCCTGTCGATTATCTCGTCACGCCAAAGAGTTATAGCATCCTGCATTGCCTCTTCCCAATTCTAACTCTAATGTGTTTCACAGTTTGGATGGCATCAAGTGCCCCTTTTGGCTGGACAGCGTTTATTGGTTGTTAGTATCAAAATTATCTTTTGATTCAGCTCTGAGAGCTCTAAAGTCATGGGATATTATCAGCTCGATGATCAAAATCGCAGGTTTTCGGAGCTAATCATATCGATTGTAAGCTGTGCCTGGGGTTATTACGACTTCCGGGGGCGCTAAGTGTGAGTCGGGGAGTCCACAACTTCGGCCCGTAGTCATCTCTCTTGTAGCATATTATTGCTGATTTCACCCTACTCTTGTTGCTTCTTCCAGGGAGCTGGAGATTCCCTGAAAGTAACTGTATGTAAACTCATTGATCACATCTCATACTTCTGAATGTCAGAAGACATCAATTCAAATCCGGTGCTTAATTCTATAGAAGGAGAGTTGTGGAGTAAATGGTCGCACCGTGAAGATATCTTATGGAGGGCTATCAGTTCTTTTTCTGGCTGGGGCAGGGTCATTATGAGGACTTTAAAGGGTAAAGTCCATTGGAAAAATTACTCTTCAACAGATATGACGAAGAGTAGGACCAAGCTCTGTAGGGGTTTTTTGCCTTCTAGACATCATGCTGCTTTGTTGGCATGGCCTCACTGGCATTCTCAAGGGAAGCTGAAGTCCTGTGATCACGTCGATTGTGGGTTCGCAGGGACGAACCGCTCTGAGAGCTCTAAAGTCATGGGATATTATCAGCTCGATGATCAAAATCGCAGGTTTTCGGAGCTAATCATATCGATTGGAGCTGGAGATTCCCTGAAAGTAACTGTATGTAAACTCATTGATCACATCTCATACTTCTGA ATGTCAGAAGACATCAATTCAAATCCGGTGCTTAATTCTATAGAAGGAGAGTTGTGGAGTAAATGGTCGCACCGTGAAGATATCTTATGGAGGGCTATCAGTTCTTTTTCTGGCTGGGGCAGGGTCATTATGAGGACTTTAAAGGGTAAAGTCCATTGGAAAAATTACTCTTCAACAGATATGACGAAGAGTAGGACCAAGCTCTGTAGGGGTTTTTTGCCTTCTAGACATCATGCTGCTTTGTTGGCATGGCCTCACTGGCATTCTCAAGGGAAGCTGAAGTCCTGTGATCACGTCGATTGTGGGTTCGCAGGGACGAACCGCTCTGAGAGCTCTAAAGTCATGGGATATTATCAGCTCGATGATCAAAATCGCAGGTTTTCGGAGCTAATCATATCGATTGGAGCTGGAGATTCCCTGAAAGTAACTGTATGTAAACTCATTGATCACATCTCATACTTCTGA MSEDINSNPVLNSIEGELWSKWSHREDILWRAISSFSGWGRVIMRTLKGKVHWKNYSSTDMTKSRTKLCRGFLPSRHHAALLAWPHWHSQGKLKSCDHVDCGFAGTNRSESSKVMGYYQLDDQNRRFSELIISIGAGDSLKVTVCKLIDHISYF Homology
BLAST of Csor.00g276680 vs. NCBI nr
Match: KAG6607705.1 (hypothetical protein SDJN03_01047, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 328 bits (842), Expect = 9.00e-114 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Csor.00g276680 vs. NCBI nr
Match: KAG7025289.1 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 83.6 bits (205), Expect = 1.25e-15 Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Csor.00g276680 vs. NCBI nr
Match: KAG6592884.1 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 83.6 bits (205), Expect = 1.25e-15 Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Csor.00g276680 vs. NCBI nr
Match: XP_023514306.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023514307.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023514308.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023514309.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 83.6 bits (205), Expect = 1.25e-15 Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Csor.00g276680 vs. NCBI nr
Match: XP_023005041.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita maxima] >XP_023005042.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 83.6 bits (205), Expect = 1.25e-15 Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Csor.00g276680 vs. ExPASy TrEMBL
Match: A0A6J1KS35 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111498151 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 6.06e-16 Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Csor.00g276680 vs. ExPASy TrEMBL
Match: A0A6J1HAJ7 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461075 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 5.80e-15 Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 0
BLAST of Csor.00g276680 vs. ExPASy TrEMBL
Match: A0A1S3BCN2 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488585 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.07e-14 Identity = 40/55 (72.73%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of Csor.00g276680 vs. ExPASy TrEMBL
Match: A0A1S3BD54 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488585 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.10e-14 Identity = 40/55 (72.73%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of Csor.00g276680 vs. ExPASy TrEMBL
Match: A0A5D3D286 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3919G00030 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.10e-14 Identity = 40/55 (72.73%), Postives = 43/55 (78.18%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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