Csor.00g275050 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g275050
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionmethyltransferase-like protein 17, mitochondrial isoform X1
LocationCsor_Chr15: 10250124 .. 10250613 (+)
RNA-Seq ExpressionCsor.00g275050
SyntenyCsor.00g275050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACGGTGGGAGCTAGTGCGGTGGTGCAAAATGGTCGAAATGTGGGAAAATGTCCAAATTAATAAAACTAATTGCATGGCTAAATTAATAAAAATAATATTAATTTTACATTTTATCCATTTTATCCATTTTTTTTAATAATTATTTAAAAAATAAATTACGTCGTCGAGGTTACACTTCCTCCGTTCGTTTCTTCCTCGGAAATCTGTGCGATTGTGTTTCTCTCTTTGCGTCTCATTCCATGGCGTTTTCTGTGCATTCCAGAGCAAGAAGTACTACACTAAGGTGCTGAGTCTGTCGGAATCATTCAGTGGTATCAAGGATGTTAATCTGCACCTGGCAGCAACCACTTCAAAGGAACTTGTTGAAGATCCTCTGAAATCAGTAGAGCAATCCAAGCGCTGGAAGATTAAGAGTTGCTATGGTGATATTGGCTTTCAGTACAGAGACGATGAGACGATTGCTTACGTCGCCTCCCGTTCTTAA

mRNA sequence

ATGGCGACGGTGGGAGCTAGTGCGGTGGTGCAAAATGGTCGAAATAGCAAGAAGTACTACACTAAGGTGCTGAGTCTGTCGGAATCATTCAGTGGTATCAAGGATGTTAATCTGCACCTGGCAGCAACCACTTCAAAGGAACTTGTTGAAGATCCTCTGAAATCAGTAGAGCAATCCAAGCGCTGGAAGATTAAGAGTTGCTATGGTGATATTGGCTTTCAGTACAGAGACGATGAGACGATTGCTTACGTCGCCTCCCGTTCTTAA

Coding sequence (CDS)

ATGGCGACGGTGGGAGCTAGTGCGGTGGTGCAAAATGGTCGAAATAGCAAGAAGTACTACACTAAGGTGCTGAGTCTGTCGGAATCATTCAGTGGTATCAAGGATGTTAATCTGCACCTGGCAGCAACCACTTCAAAGGAACTTGTTGAAGATCCTCTGAAATCAGTAGAGCAATCCAAGCGCTGGAAGATTAAGAGTTGCTATGGTGATATTGGCTTTCAGTACAGAGACGATGAGACGATTGCTTACGTCGCCTCCCGTTCTTAA

Protein sequence

MATVGASAVVQNGRNSKKYYTKVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETIAYVASRS
Homology
[Close]
BLAST of Csor.00g275050 vs. NCBI nr
Match: KAG6579574.1 (hypothetical protein SDJN03_24022, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174 bits (442), Expect = 7.08e-55
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MATVGASAVVQNGRNSKKYYTKVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSK 60
          MATVGASAVVQNGRNSKKYYTKVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSK
Sbjct: 1  MATVGASAVVQNGRNSKKYYTKVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSK 60

Query: 61 RWKIKSCYGDIGFQYRDDETIAYVASRS 88
          RWKIKSCYGDIGFQYRDDETIAYVASRS
Sbjct: 61 RWKIKSCYGDIGFQYRDDETIAYVASRS 88

[Close]
BLAST of Csor.00g275050 vs. NCBI nr
Match: KAG7017034.1 (hypothetical protein SDJN02_22146, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169 bits (428), Expect = 1.44e-51
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 1   MATVGASAVVQNGRNSKKYYTKVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSK 60
           MATVGASAVVQNGRNSKKYY KVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSK
Sbjct: 18  MATVGASAVVQNGRNSKKYYNKVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSK 77

Query: 61  RWKIKSCYGDIGFQYRDDETIAYVAS 86
           RWKIKSCYGDIGFQYRDDETIAYVAS
Sbjct: 78  RWKIKSCYGDIGFQYRDDETIAYVAS 103

[Close]
BLAST of Csor.00g275050 vs. NCBI nr
Match: XP_022957994.1 (methyltransferase-like protein 17, mitochondrial isoform X2 [Cucurbita moschata])

HSP 1 Score: 127 bits (320), Expect = 1.21e-32
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 22  KVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 81
           KVL LSESFSGIKDVNL LAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI
Sbjct: 54  KVLRLSESFSGIKDVNLQLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 113

Query: 82  AYVASR 87
           AYVASR
Sbjct: 114 AYVASR 119

[Close]
BLAST of Csor.00g275050 vs. NCBI nr
Match: XP_022957993.1 (methyltransferase-like protein 17, mitochondrial isoform X1 [Cucurbita moschata] >KAG6605595.1 Methyltransferase-like protein 17, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127 bits (320), Expect = 2.23e-32
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 22  KVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 81
           KVL LSESFSGIKDVNL LAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI
Sbjct: 54  KVLRLSESFSGIKDVNLQLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 113

Query: 82  AYVASR 87
           AYVASR
Sbjct: 114 AYVASR 119

[Close]
BLAST of Csor.00g275050 vs. NCBI nr
Match: KAG7035505.1 (Methyltransferase-like protein 17, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127 bits (320), Expect = 2.23e-32
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 22  KVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 81
           KVL LSESFSGIKDVNL LAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI
Sbjct: 54  KVLRLSESFSGIKDVNLQLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 113

Query: 82  AYVASR 87
           AYVASR
Sbjct: 114 AYVASR 119

[Close]
BLAST of Csor.00g275050 vs. ExPASy TrEMBL
Match: A0A6J1H3Q3 (methyltransferase-like protein 17, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459357 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 5.84e-33
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 22  KVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 81
           KVL LSESFSGIKDVNL LAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI
Sbjct: 54  KVLRLSESFSGIKDVNLQLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 113

Query: 82  AYVASR 87
           AYVASR
Sbjct: 114 AYVASR 119

[Close]
BLAST of Csor.00g275050 vs. ExPASy TrEMBL
Match: A0A6J1E0U3 (methyltransferase-like protein 17, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026114 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 1.08e-32
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 22  KVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 81
           KVL LSESFSGIKDVNL LAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI
Sbjct: 54  KVLRLSESFSGIKDVNLQLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 113

Query: 82  AYVASR 87
           AYVASR
Sbjct: 114 AYVASR 119

[Close]
BLAST of Csor.00g275050 vs. ExPASy TrEMBL
Match: A0A6J1H1V3 (methyltransferase-like protein 17, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459357 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 1.08e-32
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 22  KVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 81
           KVL LSESFSGIKDVNL LAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI
Sbjct: 54  KVLRLSESFSGIKDVNLQLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 113

Query: 82  AYVASR 87
           AYVASR
Sbjct: 114 AYVASR 119

[Close]
BLAST of Csor.00g275050 vs. ExPASy TrEMBL
Match: A0A6J1E517 (methyltransferase-like protein 17, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026114 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 1.09e-32
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 22  KVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 81
           KVL LSESFSGIKDVNL LAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI
Sbjct: 54  KVLRLSESFSGIKDVNLQLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 113

Query: 82  AYVASR 87
           AYVASR
Sbjct: 114 AYVASR 119

[Close]
BLAST of Csor.00g275050 vs. ExPASy TrEMBL
Match: A0A6J1KA52 (methyltransferase-like protein 17, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111491494 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 2.07e-31
Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 22  KVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 81
           KVL LS+SFSGIKDVNL LAATTSKELVEDPLKSV QSKRWKIKSCYGDIGFQYRDDETI
Sbjct: 54  KVLRLSDSFSGIKDVNLQLAATTSKELVEDPLKSVAQSKRWKIKSCYGDIGFQYRDDETI 113

Query: 82  AYVASR 87
           AYVASR
Sbjct: 114 AYVASR 119

[Close]
BLAST of Csor.00g275050 vs. TAIR 10
Match: AT1G64600.1 (methyltransferases;copper ion binding )

HSP 1 Score: 74.3 bits (181), Expect = 5.4e-14
Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 22  KVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETI 81
           KV  LSESF  IKD NL L  TT+K L  D + S+E +KRWKI++ YGD G QYRD ET 
Sbjct: 49  KVRQLSESFQEIKDTNLQLPETTAKSLA-DSMNSLE-TKRWKIQTVYGDSGLQYRDGETA 108

Query: 82  AYVASR 88
           AY+ASR
Sbjct: 109 AYIASR 112

The following BLAST results are available for this feature:
BLAST of Csor.00g275050 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g275050 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579574.17.08e-55100.00hypothetical protein SDJN03_24022, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7017034.11.44e-5198.84hypothetical protein SDJN02_22146, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022957994.11.21e-3296.97methyltransferase-like protein 17, mitochondrial isoform X2 [Cucurbita moschata][more]
XP_022957993.12.23e-3296.97methyltransferase-like protein 17, mitochondrial isoform X1 [Cucurbita moschata]... [more]
KAG7035505.12.23e-3296.97Methyltransferase-like protein 17, mitochondrial, partial [Cucurbita argyrosperm... [more]
BLAST of Csor.00g275050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H3Q35.84e-3396.97methyltransferase-like protein 17, mitochondrial isoform X2 OS=Cucurbita moschat... [more]
A0A6J1E0U31.08e-3296.97methyltransferase-like protein 17, mitochondrial isoform X2 OS=Momordica charant... [more]
A0A6J1H1V31.08e-3296.97methyltransferase-like protein 17, mitochondrial isoform X1 OS=Cucurbita moschat... [more]
A0A6J1E5171.09e-3296.97methyltransferase-like protein 17, mitochondrial isoform X1 OS=Momordica charant... [more]
A0A6J1KA522.07e-3193.94methyltransferase-like protein 17, mitochondrial OS=Cucurbita maxima OX=3661 GN=... [more]
BLAST of Csor.00g275050 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G64600.15.4e-1460.61methyltransferases;copper ion binding [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g275050.m01Csor.00g275050.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
molecular_function GO:0008168 methyltransferase activity