Csor.00g274810 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g274810
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	50S ribosomal protein L11
Location	Csor_Chr15: 10388409 .. 10391999 (+)
RNA-Seq Expression	Csor.00g274810
Synteny	Csor.00g274810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCTCCCTCTCCATCTATCATCCATTTTCTTCTAAACTTACTGCTAATTCCAAGCATCTTTCCTCTTCCTTTCTTGCTTCACCCTCTTCAGGGTTGTCTTCAAAGTTCAATTTCTCGCTTCGATTCTTCAGCCATGGCCAATCTTCGTCGCTAATCTCTCCCACTCCAAGGCGTCTCAGTGTTGTCTCAATGGCGCCTCCTAAAGCCAAGCCTGGTGGAAAAGCCAAGAAGGGTAAATTTCTTATTCGCATAAACCCTTAATTTTTTTCCACATTGTTCTTGATTGAGCTCTGGTTTTCTTTAATTTGGTTTTGGGGGTTGCAGTAATTGGGGTGATTAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCTAAGGGTGTTAATATTATGGCTTTCTGTAAGGATTACAATGCCAAGACAGCCGACAAGGCTGGCTACGTTATTCCAGTTGAAATTACTGTTTACGATGTGGGTTTGTTCTTCCTTTCTCTGTTGTTGTCTGTGAATGATTTGCTATGCTTTCCTTTGGGAATTTCTTGATTGTTTGATTTGGAACAGGATAAAAGTTTTACTTTCGTGCTCAAGACTCCCCCTGCTTCAGTTCTTCTTCTCAAGGCTGCTGGTATTTCCCTTTTGAACTGTTTGATGTTCCTTTTGGCTGTTTTATTTTCTTATTTTGTGTGTTTATCTGCTGATATGTCTATCCAACAGTAACTTGTTTAGATTGGCTTAGAGTGGATTTAGATAAAATTGTAGTGGCAGAGATCAGTGTCTTTAATAAGCATGAATTTGAGGTCTGAGGTGGGAAATGGCCCTTGAATTACCTTGATATGTAGTTATAATCATAGAAATATTAGTATTTTGCATTCCTTAGTTGAAGGAATTGATGAGAGGATTGAGAAATGGAAGAAGTCCTACATCCTATGAGTCATCTTCCTCACCCTAGCCTAGGTTGGGAGGTTGTATTATCTAACAGGCGCATTTTAAAACCTTGAGGGGAAGCCCGGAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGAGTTGTTACAAATGGTATTAGAGTCAGTCATCGAGCAGTGTACCAGCGAGGACGTTGGGCCTCCAAGGGGGGTGGAATGTGAGATCTCATATCGGTTGGAGTGGGTAATGAAGCATTTCTTATAAGGGTGTGGAAACCTCACCCTATGCGTTTTAAAACCTTAAGGGGAAGCCTAGAAGAGAAACCCCAAAGAGGACAATATTTGCTAGCGGTGAGCCTGGGCTGTTACAGAGATGACGTCCTATCTTAAATAGATCAAAGGCTTCTTCGGGGGTGGTATGAACATCCATAATAAAATCTGAAAAGATTGCCAGTGATCTTCTTGTCTCGAGCTGATATGTCTGGTGCAAGCAATATTGGAAGGATATTATCCTCCTCTTCAACAAATTGCAGCTTACTACCCATCTCTCTTAGAGGCTGTTGGAAACCATGTTTTTGTGTCTCCTTCAAATTTCAGGCCTTCGTGTATCATTCCATTTTCAACCGGGATCTATTCCGTAGCTTGATGCTATTATTAGGAATCACGGATCTCCACCGATCCGTGGTTTGATATTGTCCACTTTGAGCCTAAGCTCTCATAGCTTTGCTTTTGGCTTCTCCAAAACGCCTCATCCTAATGGAGACAGTATTTCTTTACTTATAAATCCATGATCAACCCCTTGAATCACTACCAATGGACACGTTTCGACTTGGCAAATTGTTCAGTAAATACTTAAGTAGCATGTTGCAGTGAATCCATAGTTCCTCAATGGCTATCAATGTTTGGGCACAAATCCTCCAAGGGGTGGAGGGACTGTTGCAGCTTGAGCATTGTGGCTGGGCGGCATACTCACCTCCCATCACAGCTCGAGTATGCGTTAGGTACCCAAACACAAGATCAAAAGAAATTACAATATTACAATAGCCTTTCAAGAGCGCTATCGTCGAACTGTTGCATCTCGAGAATCTGCTTCTTCTCTCTTTTATGATACAATACATGTCGTTTTGTTACGAGATCATACGCAAAAACGATCATCAAACTTTCGTTTTAATCAGTATGAACTGGTTATGCAGGAGTTGAAAAGGGATCAAAAGATCCACAGGCACAAAAAGTGGGAAAGATAACCATTGAACAGCTGCGTGTGATTGCTGCAGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCAGCAATGAGGGTCATAGCAGGGACAGCAGCCAATATGGGAATTGAGGTCGATCCTCCTGTTCTTGAACCTAAAAAGAAGGAACTTGTGTAGCCATTTGTGAGAAATTGGTTTATTCTTTACCTTTTTTGTATGCTTTGATCTATTTGAGGTATCTTAATGTAACATTTACAAGTCCACAATCAAGCTTCCTACTTTCTATATGGTTCCTGTTCTTGATTTTACTTAGCTTTCTTCTTTGTTTATCGTGAATAGCATTCCATTTCGAGCCTCGGTTTCGAGCATGGGCTCGGAATCAACAATTTTATCCACTATGGTTTCTTGTTCTCTCCTATTTTTTATGGTCTCATGCCCATGATTCGGAATCTGGATATGGCCTTTGATGACCTCGACATTTCTTTGCATCCCCTGATCACGTTACAGTTCGTTTTTAAGAGTAAAGATTATCCCCACAAACCAATCCAATCCCTTCCAAAATGTTTTGTTCTTATTTACATGCATCAGGTGAAAACTTTCAAGAGGTCGTACAATATAGAGTAGCTCTAGGAAAAACACACTTAACCATGAGGTTTCTATGATCGAATCACTGAAAATGAAGGTGTATGGTGTATGTTTTGGTTCCCATGAGAATTTGGAAGAACAACACTAAGTTGTAGGTCTAGTTAAATGGGTTGAACGGTACGAGTTTGTGTCAATAGAGGTTAATGACACATTGATGAGTTCCCATGAGGTCTAGTCAATGAACGACATATTGATGTTTGACGATCAGTTTTGGAGAAATTGTCACACTGACCGACCAACTACAATGATGGTGAGTTGGTTTTGGTCGATTTCGCGATTTTGGATATATCAGTTGTATCATAGATATACAGCTTTTATACTGAACATCAAATATATCATTTATATATTTAATATTATATATTCAACCACACATGTTTTATGTTGGTTGAGTCATACAACCTTCTATTTTATATGTTAATGCAATCCTTGACAGCAAAAAGAACGAAATCGAAACAAAAGAAATCAAGAGAAGATCAAGGATGATGTCAATGAACGATTGCATTTTGTGCACTTTATCGATTCACCGATCGTCATCAAATCAAATAAAGATATCATATGACATAATATACTTTTTTTTTTTTTTGAAATAAGAACATTATGGATAAACTATGATGATAAACATCTCAGCTGGCCAGTCTTCAAGCCATACGCTGTCAACTTGTCATCCCATGTCAAGCTTGGCAGTTGGTCGTTGATGGAGGAGGCCATTGTGCGGCCCGACATCAGCTCAACCAGCTCAGAAAGCTCCTCTGTCGGAGATGCGAGCAGCCCTTAA

mRNA sequence

ATGGCGTCCTCCCTCTCCATCTATCATCCATTTTCTTCTAAACTTACTGCTAATTCCAAGCATCTTTCCTCTTCCTTTCTTGCTTCACCCTCTTCAGGGTTGTCTTCAAAGTTCAATTTCTCGCTTCGATTCTTCAGCCATGGCCAATCTTCGTCGCTAATCTCTCCCACTCCAAGGCGTCTCAGTGTTGTCTCAATGGCGCCTCCTAAAGCCAAGCCTGGTGGAAAAGCCAAGAAGGTAATTGGGGTGATTAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCTAAGGGTGTTAATATTATGGCTTTCTGTAAGGATTACAATGCCAAGACAGCCGACAAGGCTGGCTACGTTATTCCAGTTGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTCAAGACTCCCCCTGCTTCAGTTCTTCTTCTCAAGGCTGCTGGAGTTGAAAAGGGATCAAAAGATCCACAGGCACAAAAAGTGGGAAAGATAACCATTGAACAGCTGCGTGTGATTGCTGCAGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCAGCAATGAGGGTCATAGCAGGGACAGCAGCCAATATGGGAATTGAGGTCGATCCTCCTGTTCTTGAACCTAAAAAGAAGGAACTTGTCTGGCCAGTCTTCAAGCCATACGCTGTCAACTTGTCATCCCATGTCAAGCTTGGCAGTTGGTCGTTGATGGAGGAGGCCATTGTGCGGCCCGACATCAGCTCAACCAGCTCAGAAAGCTCCTCTGTCGGAGATGCGAGCAGCCCTTAA

Coding sequence (CDS)

ATGGCGTCCTCCCTCTCCATCTATCATCCATTTTCTTCTAAACTTACTGCTAATTCCAAGCATCTTTCCTCTTCCTTTCTTGCTTCACCCTCTTCAGGGTTGTCTTCAAAGTTCAATTTCTCGCTTCGATTCTTCAGCCATGGCCAATCTTCGTCGCTAATCTCTCCCACTCCAAGGCGTCTCAGTGTTGTCTCAATGGCGCCTCCTAAAGCCAAGCCTGGTGGAAAAGCCAAGAAGGTAATTGGGGTGATTAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCTAAGGGTGTTAATATTATGGCTTTCTGTAAGGATTACAATGCCAAGACAGCCGACAAGGCTGGCTACGTTATTCCAGTTGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTCAAGACTCCCCCTGCTTCAGTTCTTCTTCTCAAGGCTGCTGGAGTTGAAAAGGGATCAAAAGATCCACAGGCACAAAAAGTGGGAAAGATAACCATTGAACAGCTGCGTGTGATTGCTGCAGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCAGCAATGAGGGTCATAGCAGGGACAGCAGCCAATATGGGAATTGAGGTCGATCCTCCTGTTCTTGAACCTAAAAAGAAGGAACTTGTCTGGCCAGTCTTCAAGCCATACGCTGTCAACTTGTCATCCCATGTCAAGCTTGGCAGTTGGTCGTTGATGGAGGAGGCCATTGTGCGGCCCGACATCAGCTCAACCAGCTCAGAAAGCTCCTCTGTCGGAGATGCGAGCAGCCCTTAA

Protein sequence

MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELVWPVFKPYAVNLSSHVKLGSWSLMEEAIVRPDISSTSSESSSVGDASSP

Homology

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BLAST of Csor.00g274810 vs. ExPASy Swiss-Prot
Match: Q9MAP3 (50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.0e-83
Identity = 165/212 (77.83%), Postives = 187/212 (88.21%), Query Frame = 0


Query: 16  TANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGG 75
           T++S H +S    S S+ LSSK N S++F    Q S L+S TPR L+V++MAPP  KPGG
Sbjct: 13  TSSSLHPNSKLSHSLSAKLSSKANVSVQFLGKKQ-SPLLSSTPRFLTVIAMAPP--KPGG 72

Query: 76  KAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITV 135
           KAKKV+GVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAGY+IPVEITV
Sbjct: 73  KAKKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYIIPVEITV 132

Query: 136 YDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTT 195
           +DDKSFTF+LKTPPASVLLLKAAGVEKGSKDPQ  KVG ITI+QLR IAAEKLPDLNCTT
Sbjct: 133 FDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNCTT 192

Query: 196 IESAMRVIAGTAANMGIEVDPPVLEPKKKELV 228
           IESAMR+IAGTAANMGI++DPP+LEPKKK ++
Sbjct: 193 IESAMRIIAGTAANMGIDIDPPILEPKKKAVL 221

[Close]

BLAST of Csor.00g274810 vs. ExPASy Swiss-Prot
Match: P31164 (50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea OX=3562 GN=rpl11 PE=1 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 8.8e-76
Identity = 160/220 (72.73%), Postives = 182/220 (82.73%), Query Frame = 0


Query: 10  PFSSKLTAN-SKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAP 69
           P SS +T+   + L SS L   S  LSS    SL+F +     S  S + RRLS+V+MAP
Sbjct: 9   PSSSSITSPIPRKLCSSLLTPSSLSLSSNPRNSLQFLNSKLFLSPPSTSHRRLSIVAMAP 68

Query: 70  PKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYV 129
              KP GKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADK G+V
Sbjct: 69  ---KP-GKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGFV 128

Query: 130 IPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQLRVIAAEKL 189
           IPVEITV+DDKSFTF+LKTPPASVLLLKA+G EKGSKDPQ +KVGKITI+QLR IA EKL
Sbjct: 129 IPVEITVFDDKSFTFILKTPPASVLLLKASGAEKGSKDPQMEKVGKITIDQLRGIATEKL 188

Query: 190 PDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELVW 229
           PDLNCTTIESAMR+IAGTAANMGI++DPP+L  KKKE+++
Sbjct: 189 PDLNCTTIESAMRIIAGTAANMGIDIDPPILVKKKKEVIF 224

[Close]

BLAST of Csor.00g274810 vs. ExPASy Swiss-Prot
Match: O78412 (50S ribosomal protein L11, chloroplastic OS=Guillardia theta OX=55529 GN=rpl11 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.2e-50
Identity = 100/138 (72.46%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 77  AKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 136
           AKKV+ +IKLALEAGKATPAPPVGPALG +GVNI+ FCKDYNA+TADKAG +IPVEITVY
Sbjct: 2   AKKVVAIIKLALEAGKATPAPPVGPALGQRGVNIVMFCKDYNARTADKAGLIIPVEITVY 61

Query: 137 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTI 196
           +DKS+TFVLKTPPASVLL KAAGV+KGS +P+  +VG +T +Q+  IA  KLPDLN   +
Sbjct: 62  EDKSYTFVLKTPPASVLLAKAAGVQKGSGNPKKTQVGSVTKKQVEEIAQTKLPDLNTRRL 121

Query: 197 ESAMRVIAGTAANMGIEV 215
           ESA+R+I GTA NMGI V
Sbjct: 122 ESAIRIIEGTAKNMGIGV 139

[Close]

BLAST of Csor.00g274810 vs. ExPASy Swiss-Prot
Match: B8HVL5 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplK PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.3e-50
Identity = 94/138 (68.12%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 77  AKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 136
           AKKV+ +IKLA+ AGKA PAPP+GPALG  GVNIM FCK+YNA+TAD+AG VIPVEI+VY
Sbjct: 2   AKKVVAIIKLAITAGKANPAPPIGPALGQHGVNIMMFCKEYNARTADQAGLVIPVEISVY 61

Query: 137 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTI 196
           +D+SFTF+LKTPPASVL+ KAAG+E+GS +P  +KVGKIT  QLR IA  KLPDLN   +
Sbjct: 62  EDRSFTFILKTPPASVLIQKAAGIERGSGEPNKKKVGKITTAQLREIAQTKLPDLNANDV 121

Query: 197 ESAMRVIAGTAANMGIEV 215
           ++AMR++AGTA NMG+ +
Sbjct: 122 DAAMRIVAGTARNMGVTI 139

[Close]

BLAST of Csor.00g274810 vs. ExPASy Swiss-Prot
Match: B7JWT8 (50S ribosomal protein L11 OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=rplK PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.3e-50
Identity = 98/138 (71.01%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 77  AKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 136
           AKKV+ +IKLAL AGKA PAPPVGPALG  GVNIMAFCK+YNAKTAD+AG VIPVEI+V+
Sbjct: 2   AKKVVAMIKLALPAGKANPAPPVGPALGQHGVNIMAFCKEYNAKTADQAGMVIPVEISVF 61

Query: 137 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTTI 196
           +D+SFTFVLKTPPASVL+ KAAGVE+GS  P   KVG IT +QLR IA  K+PDLN   I
Sbjct: 62  EDRSFTFVLKTPPASVLIRKAAGVERGSNQPNKTKVGSITQDQLREIAQTKMPDLNANDI 121

Query: 197 ESAMRVIAGTAANMGIEV 215
           E+AM+++AGTA NMG+ +
Sbjct: 122 EAAMKIVAGTARNMGVTI 139

[Close]

BLAST of Csor.00g274810 vs. NCBI nr
Match: KAG6579598.1 (50S ribosomal protein L11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 518 bits (1333), Expect = 1.31e-184
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR 60
           MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR
Sbjct: 1   MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR 60

Query: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120
           LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK
Sbjct: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120

Query: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180
           TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL
Sbjct: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180

Query: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELVWPVFKPYAVNLSS 240
           RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELVWPVFKPYAVNLSS
Sbjct: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELVWPVFKPYAVNLSS 240

Query: 241 HVKLGSWSLMEEAIVRPDISSTSSESSSVGDASSP 275
           HVKLGSWSLMEEAIVRPDISSTSSESSSVGDASSP
Sbjct: 241 HVKLGSWSLMEEAIVRPDISSTSSESSSVGDASSP 275

[Close]

BLAST of Csor.00g274810 vs. NCBI nr
Match: XP_022929065.1 (50S ribosomal protein L11, chloroplastic [Cucurbita moschata])

HSP 1 Score: 428 bits (1100), Expect = 7.34e-150
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR 60
           MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR
Sbjct: 1   MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR 60

Query: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120
           LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK
Sbjct: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120

Query: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180
           TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL
Sbjct: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180

Query: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227
           RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227

[Close]

BLAST of Csor.00g274810 vs. NCBI nr
Match: XP_023520503.1 (50S ribosomal protein L11, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421 bits (1083), Expect = 2.85e-147
Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR 60
           MASSLSIYHPF SKLTANSKHLSSSFLASPSSGLSSKFNF LRFFS+GQSSSLISPTPRR
Sbjct: 1   MASSLSIYHPFPSKLTANSKHLSSSFLASPSSGLSSKFNFPLRFFSNGQSSSLISPTPRR 60

Query: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120
           LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK
Sbjct: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120

Query: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180
           TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL
Sbjct: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180

Query: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227
           RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227

[Close]

BLAST of Csor.00g274810 vs. NCBI nr
Match: XP_022970097.1 (50S ribosomal protein L11, chloroplastic [Cucurbita maxima])

HSP 1 Score: 421 bits (1082), Expect = 4.05e-147
Identity = 223/227 (98.24%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR 60
           MASSLSIYHPFSSK TANSKHLSSSFLASPSSG SSKFNFSLRFFS+GQSSSLISPTPRR
Sbjct: 1   MASSLSIYHPFSSKFTANSKHLSSSFLASPSSGFSSKFNFSLRFFSNGQSSSLISPTPRR 60

Query: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120
           LSVVSMAPPKAKPGGK+KKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK
Sbjct: 61  LSVVSMAPPKAKPGGKSKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120

Query: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180
           TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL
Sbjct: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180

Query: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227
           RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227

[Close]

BLAST of Csor.00g274810 vs. NCBI nr
Match: KAG7017058.1 (50S ribosomal protein L11, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421 bits (1083), Expect = 9.35e-147
Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR 60
           MASSLSIYHPF SKLTANSKHLSSSFLASPSSGLSSKFNF LRFFS+GQSSSLISPTPRR
Sbjct: 34  MASSLSIYHPFPSKLTANSKHLSSSFLASPSSGLSSKFNFPLRFFSNGQSSSLISPTPRR 93

Query: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120
           LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK
Sbjct: 94  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 153

Query: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180
           TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL
Sbjct: 154 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 213

Query: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227
           RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 214 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 260

[Close]

BLAST of Csor.00g274810 vs. ExPASy TrEMBL
Match: A0A6J1ET69 (50S ribosomal protein L11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435764 PE=3 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 3.55e-150
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR 60
           MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR
Sbjct: 1   MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR 60

Query: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120
           LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK
Sbjct: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120

Query: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180
           TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL
Sbjct: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180

Query: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227
           RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227

[Close]

BLAST of Csor.00g274810 vs. ExPASy TrEMBL
Match: A0A6J1HY65 (50S ribosomal protein L11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469089 PE=3 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 1.96e-147
Identity = 223/227 (98.24%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASSLSIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRR 60
           MASSLSIYHPFSSK TANSKHLSSSFLASPSSG SSKFNFSLRFFS+GQSSSLISPTPRR
Sbjct: 1   MASSLSIYHPFSSKFTANSKHLSSSFLASPSSGFSSKFNFSLRFFSNGQSSSLISPTPRR 60

Query: 61  LSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120
           LSVVSMAPPKAKPGGK+KKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK
Sbjct: 61  LSVVSMAPPKAKPGGKSKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAK 120

Query: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180
           TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL
Sbjct: 121 TADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQL 180

Query: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227
           RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 RVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227

[Close]

BLAST of Csor.00g274810 vs. ExPASy TrEMBL
Match: A0A5D3C6S0 (50S ribosomal protein L11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001370 PE=3 SV=1)

HSP 1 Score: 383 bits (983), Expect = 3.01e-132
Identity = 205/234 (87.61%), Postives = 216/234 (92.31%), Query Frame = 0


Query: 1   MASSLSIYHP-------FSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSL 60
           MASSLS YH        FSSK++ANS HLSS FL S SSGLSSKFNFSLRF ++GQSSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS TPRRLSVVSMAPPKAKPGGKAKKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ +KVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227
           K+TIEQLR IAAEKLPDLNCTTIESAMR+IAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of Csor.00g274810 vs. ExPASy TrEMBL
Match: A0A1S3AU30 (50S ribosomal protein L11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482876 PE=3 SV=1)

HSP 1 Score: 383 bits (983), Expect = 3.01e-132
Identity = 205/234 (87.61%), Postives = 216/234 (92.31%), Query Frame = 0


Query: 1   MASSLSIYHP-------FSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSL 60
           MASSLS YH        FSSK++ANS HLSS FL S SSGLSSKFNFSLRF ++GQSSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS TPRRLSVVSMAPPKAKPGGKAKKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ +KVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227
           K+TIEQLR IAAEKLPDLNCTTIESAMR+IAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of Csor.00g274810 vs. ExPASy TrEMBL
Match: A0A0A0KQJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146890 PE=3 SV=1)

HSP 1 Score: 381 bits (978), Expect = 8.53e-131
Identity = 204/234 (87.18%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 1   MASSLSIYHP-------FSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSL 60
           MASS+S YH        FSSK++A+S  LSS FL S SSGLSSKFNFSLRF ++GQSSSL
Sbjct: 46  MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 105

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLSVVSMAPPKAKPGGKAKKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 106 ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 165

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ +KVG
Sbjct: 166 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 225

Query: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227
           KITIEQLR IAAEKLPDLNCTTIESAMR+IAGTAANMGIE+DPPVLEPK K LV
Sbjct: 226 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 279

[Close]

BLAST of Csor.00g274810 vs. TAIR 10
Match: AT1G32990.1 (plastid ribosomal protein l11 )

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-84
Identity = 165/212 (77.83%), Postives = 187/212 (88.21%), Query Frame = 0


Query: 16  TANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVSMAPPKAKPGG 75
           T++S H +S    S S+ LSSK N S++F    Q S L+S TPR L+V++MAPP  KPGG
Sbjct: 13  TSSSLHPNSKLSHSLSAKLSSKANVSVQFLGKKQ-SPLLSSTPRFLTVIAMAPP--KPGG 72

Query: 76  KAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITV 135
           KAKKV+GVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAGY+IPVEITV
Sbjct: 73  KAKKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYIIPVEITV 132

Query: 136 YDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNCTT 195
           +DDKSFTF+LKTPPASVLLLKAAGVEKGSKDPQ  KVG ITI+QLR IAAEKLPDLNCTT
Sbjct: 133 FDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNCTT 192

Query: 196 IESAMRVIAGTAANMGIEVDPPVLEPKKKELV 228
           IESAMR+IAGTAANMGI++DPP+LEPKKK ++
Sbjct: 193 IESAMRIIAGTAANMGIDIDPPILEPKKKAVL 221

[Close]

BLAST of Csor.00g274810 vs. TAIR 10
Match: AT5G51610.1 (Ribosomal protein L11 family protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-40
Identity = 102/219 (46.58%), Postives = 130/219 (59.36%), Query Frame = 0


Query: 6   SIYHPFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSLISPTPRRLSVVS 65
           S++HP S  ++AN               L+SK N S +F ++ Q S L+S TPR L+V++
Sbjct: 15  SLHHPLSHSISAN---------------LTSKTNLSFQFLANRQ-SPLLSSTPRSLTVIA 74

Query: 66  MAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKA 125
            A   +K  GK KKV+G++K+ + AGKAT APP                           
Sbjct: 75  GATAPSKLRGKTKKVVGIVKMNVWAGKATLAPP--------------------------- 134

Query: 126 GYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQLRVIAA 185
                       D+SFTF+LKTPP S LLLKAAGV+KGSKDP+  KVG ITI+Q+R IA 
Sbjct: 135 ------------DQSFTFILKTPPTSFLLLKAAGVKKGSKDPKQIKVGMITIDQVRKIAE 178

Query: 186 EKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKK 225
            KLP+LNCTTI S MR IAGTA NMGI++DPP+LEPK K
Sbjct: 195 VKLPELNCTTIVSTMRTIAGTAGNMGIDIDPPILEPKNK 178

[Close]

BLAST of Csor.00g274810 vs. TAIR 10
Match: AT4G35490.1 (mitochondrial ribosomal protein L11 )

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-22
Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 78  KKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTAD-KAGYVIPVEITVY 137
           + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NA+T   K    + V IT +
Sbjct: 11  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70

Query: 138 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVGKITIEQLRVIAAEKLPDLNC--T 197
            D SF F +K+P  S  + KAAGV+KGS  P    V  +++  +  IA  K  D  C   
Sbjct: 71  KDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVKQTDPFCQYM 130

Query: 198 TIESAMRVIAGTAANMGIEV 215
            +ES  + I GTA +MGI++
Sbjct: 131 PLESICKSIIGTANSMGIKI 150

The following BLAST results are available for this feature:

BLAST of Csor.00g274810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAP3	2.0e-83	77.83	50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
P31164	8.8e-76	72.73	50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea OX=3562 GN=rpl11 P...	[more]
O78412	2.2e-50	72.46	50S ribosomal protein L11, chloroplastic OS=Guillardia theta OX=55529 GN=rpl11 P...	[more]
B8HVL5	8.3e-50	68.12	50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39...	[more]
B7JWT8	8.3e-50	71.01	50S ribosomal protein L11 OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=r...	[more]

BLAST of Csor.00g274810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579598.1	1.31e-184	100.00	50S ribosomal protein L11, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]
XP_022929065.1	7.34e-150	100.00	50S ribosomal protein L11, chloroplastic [Cucurbita moschata]	[more]
XP_023520503.1	2.85e-147	98.68	50S ribosomal protein L11, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022970097.1	4.05e-147	98.24	50S ribosomal protein L11, chloroplastic [Cucurbita maxima]	[more]
KAG7017058.1	9.35e-147	98.68	50S ribosomal protein L11, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Csor.00g274810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ET69	3.55e-150	100.00	50S ribosomal protein L11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1HY65	1.96e-147	98.24	50S ribosomal protein L11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A5D3C6S0	3.01e-132	87.61	50S ribosomal protein L11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3AU30	3.01e-132	87.61	50S ribosomal protein L11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482876...	[more]
A0A0A0KQJ8	8.53e-131	87.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146890 PE=3 SV=1	[more]

BLAST of Csor.00g274810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32990.1	1.4e-84	77.83	plastid ribosomal protein l11	[more]
AT5G51610.1	1.2e-40	46.58	Ribosomal protein L11 family protein	[more]
AT4G35490.1	3.4e-22	43.57	mitochondrial ribosomal protein L11	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000911	Ribosomal protein L11/L12	SMART	SM00649	rl11c	coord: 84..215 e-value: 1.2E-79 score: 280.6
IPR000911	Ribosomal protein L11/L12	PANTHER	PTHR11661	60S RIBOSOMAL PROTEIN L12	coord: 52..215
IPR000911	Ribosomal protein L11/L12	HAMAP	MF_00736	Ribosomal_L11	coord: 80..216 score: 29.413969
IPR000911	Ribosomal protein L11/L12	CDD	cd00349	Ribosomal_L11	coord: 84..214 e-value: 2.53656E-70 score: 211.155
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	GENE3D	1.10.10.250		coord: 147..228 e-value: 1.2E-36 score: 126.4
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	SUPERFAMILY	46906	Ribosomal protein L11, C-terminal domain	coord: 142..215
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	GENE3D	3.30.1550.10		coord: 75..146 e-value: 2.4E-36 score: 125.2
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	SUPERFAMILY	54747	Ribosomal L11/L12e N-terminal domain	coord: 74..159
IPR006519	Ribosomal protein L11, bacterial-type	TIGRFAM	TIGR01632	TIGR01632	coord: 78..215 e-value: 7.8E-62 score: 205.3
IPR020784	Ribosomal protein L11, N-terminal	PFAM	PF03946	Ribosomal_L11_N	coord: 77..141 e-value: 8.5E-32 score: 108.8
IPR020783	Ribosomal protein L11, C-terminal	PFAM	PF00298	Ribosomal_L11	coord: 146..214 e-value: 1.4E-23 score: 83.2
None	No IPR available	PANTHER	PTHR11661:SF10	RIBOSOMAL PROTEIN L11	coord: 52..215
IPR020785	Ribosomal protein L11, conserved site	PROSITE	PS00359	RIBOSOMAL_L11	coord: 201..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g274810.m01	Csor.00g274810.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome