
Csor.00g273720 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGATAGACGGTTTCAGGTACGAATGTTTGTTTGAGTGTTTTTGGTTTTTCTCTTTTCTTAATAATCAGCTACCATATTGTTTTGAATTGTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATCAAGAATATAAGATTTTTATTTATTTTTTATTTTTTGAGAATGGAATTGGAGGATTGGGTAAGCATGAGAAAGGGGGAAAATCAAATTCGTTAGTAAATTATGAGCAAATTAAACCGTTTTAGAAAGTAATTTATTATTTAAAAAAACTCAGCTGTTAAGAGATGTGAAACACAATGTAAACAATCGATGAGAAAATAATTTTATAAAAATAATTAATTAATTTTTCGTATTAAAAATTAAGCCTATTAATATTATTTAAATCTATAATTTTTTTTAATGTTTTGATATCTATTGTTTATTCATATTTTAAAAATCTAAGTTAGGATTTTTTAAAATTTAAAAAGATTGCCAAAATTTTGCTTATTCTTTTTTATCATTTCTCAATAAATATTTTTTTATTTTTCTTAATAAAATATTAGAATTCATAGTAAAATTTAAAAAGCAAACATATATTTTATTATTATTATTATTATTTTAATATATATATATATAGTTTTCAATACTTAATTTGATTTTTTAGAACATATACAAAATGCAGATAATAAAACACAAAAATTCATGGGTAAACTATAATTTTAATTTTAAAAATTAAGAACATTAATATTTATTGACTAAAAATAAGAACATTAATTTTTAAAACATTAATGTTTATTAAATTCATAGTTTTCAATACTTATGCTTTTTTCTAATTTGACTAAAAATTTAAATATTTTATTAAATACGAACAAAAATAATTTTTAAAATAAAATGTAAAACAAAATATTTATGGAATGATACTCAAATATCCAAAATGATCAAATATCCAAATATCCAAAATGATCAAATTATATTTTAACTTGTATTTAATACAAACGAGTATTTTATATATTTAAATAAGAACTTATTTTTATTAAATAGTTTATATTTAAACATTTAATCTCTTCATCAATAATATATATTTAATGATAGGTTAATCTTCAAAATTTTAATTTTAATGTATCGTCTAATAAATATTTTACTTATTTAATATTTTTAAAATTTATCTTAAAAAATTTAATCTTTTTTATCATTATGTTTAATAAATGATTATCTATTACTCATAGATTCAATAATTAATAATTTCTTTAACATAATTTTAATTTTTTTTTTAGATTTATTATATTTTTAGAATATTATAAAACATATTAAACACAAAAAAAATATTTGGTATAATTTATCTAATAATAATGCTACTAATTTAAATCCTAAATTTATATCTATTAAATTTTATTTTAAAAATAGTTAGTTCAAATATGCTTAAATTTAAATTAAATTAGATTCTTAATACTCTAAATCAATTAGTATGATTTAAAAAAAAAATCTATATATTTTTAAAAATTAAAAATTTTAAAATACTGAATGATTTTCAAATCGAATATTTAAATATTTTTAAAAAACTAAAAATTTTAAATTGAGTATCTAAATTATTTATGAAAATGGAACGAATAGAAATATAAAATTTGTGAAAATATTATAATTTGATTTAAAAAAAAAAAAACTAGAAATAGGCAAAGCGCGACAAACTCAACCTGCTAGAGCGGTTAGGCTATCTGCTGTGCAAATCTAATTGTCACCGGTAACCGCCGGTTTCCATCATTGATTTGGCGGAGATTATTAGTTTACCCCAAACATTCACGTCTCAGTCCCAATCCCTTCACCATTTCCCGAGGCAACTTTCATCCTTATCGTCACGTCGTCGCCGATCGTCGCGAATCTCCGATCGCCTCTCTCTCGTCCGGTTCGTCTCTTCTGCTACTGTTATCTGCAATTATTGATTGTTTCCTTTTTCGTCTTTCATTGTTGGATCGAGAAGTTTTGTGGTTGATTGTCGATTTTTGGTTTGTTTGATGGATGATCGGGTATGTCCTGTGGTTTGATTGGTGGTGTTCTTTGTTGCCTATTGGTACGATGTTAGATCCGTTTGTTGTTTGTTTTTGAATCATTGAATGGATGATTCTACGACCTAAATATACGATTATGTGTGCGTATGTGCAACTGCGATTAGATTTTTAATTTACACTTTTTCAGGTTTAAATCCTTGTTATGTGATTTAATTGTGAAAACTTGTTGTAAATTAGAGGGATAATCGGGATGTCTTGATGACTCGTCGAATTGATGTGGCACGAGGGGAGTTTCCTTCTTGCTTGTCTTATTGTTGTGTTTCCGTTTATGGAGTTGGAAGTTATGGATGCGACTTATTACTTAGGTCTAAAATTCTCAGGTAGATAGATTGTCACACAGTTGAAATTGCATCTGGAGCATGTTTTTTTTTTTCTTTCCTACCTTCTTCCTTTTAATCGAGCTGTTAAGAAGATATGTTTTCCTTTTCCAGTTTTTGGGAGGTTCCAGCACACGAGGACTCCCTTAGGATGGCAGATAATGATGGAGAAGACAGTACCTCTCGTGGAACTGAATGGGAAGTTGTTTCACTCACTGCTTCGGCATATGAAGCTGCTCCTAGTGCGAAGGAAGATGAACAGAGTGATGAAAATAAAAGCAATTTGTATGAAGCAGAAACTTCCCACGCTCTTTTTATGTCTAAGCACTTTGTATTTCCACCAAGTCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGCGAGATTCATGATGACCAAGGAGTGAAGGAGAATGTGGTGTCTGATTCTGCTGCTGTAGATGGCGGGAAATCTGGTGGAAAGTCTGAAGATAGCTTGAATTTAGAAGGGTTGGGTGAGACAGATGAGTTTTCGGGGATTGATAAAACTACGGAGAAAGGCAGCAAGTTGTCTTTTCATGGTGATGATTTTGGTGAAAATACCACATTACAAGATTTGAATCTGGTTCACAAGGAGCAGGACCTCTTTGGTGCCCCTACATATAGTTCTTTTCATGCTGAAAGTGATCTCAGTTCAACGACATTTGATGAAATCCCTCCACCTGAACCTACTGATCAAGTCTCAACTCCAGAAATCTCAGAAACTCCTAGACTCAATCGTAAGAGCAAAAAGTCCAGTCTTCCTTGTGGTGCTTGGTGGAAGAGAAGAGCTGCGAGTTTATACTCTCATGCAAAAGAAGCGAATGCATTTTGGTCCATTTTCATTGCAGCAGCTGTTATGGGACTTGTAATACTTGGGCAGCGTTGGCAGCAGGAGAGTTGGCAATCTCTGCAACTGAAGTGGCACATTAGTGTGAATGATCAGGTATGTTGATTCTTGTTTCCTCCGTATGGTCGCATTCCGTAAATTCACAGCTGCTTCATTATCATTCTGTGTGTATATATTTGTTACTGAATTTTAAGTTTTCAGATTTCAGTCTGTAGAATGGATTGAGAATGAGATTTAAGTTCAATCTCAACAAACGCAATGGTACTGACAACTAAGATCTGGTGAAAATAGATTATTTGTTTAGGATGATTAAACTTAGTTGACATCCATCACCCAAATTGGAGATTAAATTCTGAGAATTGCTACTTAGCCTGCTAGCTTTTTATTTCTAAGAAGATCCAACTGGTGCTTTGGCTTGATGTTGAACTGCCAAGCTTAAATTTTACAAGTAGAAACAATATGAATGAGCAAGTTGGTGGGAGAAATTCGGGGACCTTCCATCAAGGTAATCGAGTTTTGTTGAATACTAACCAATTTGAATAGCTAACCCTTATTCTGACAGGGGAACTCATTAATACTAGCAGTTTTGTTGAGTACTTTTTTTTTTATACTGGTGAGTGCTGTTGTCTTGCAGCATCTTCAGTAATTTCTTGTCTCACTATAATACATTTGGTTGTAGGAAATGCGTAAGATATTAAATCCTTGGTTGGCAACCAATCATGGATTGAACTCATTCCCTCTTATTTACCCGAGGCCCTTTTGATCACTAGGTCAACTCAGAATAGTTAAGTTTTGTTGAATACTTTTTTTTTTTTTAATTTTATATATCGATGAATTTTACGGGACAACATTCTAACTCTACTTCGTTTGGTTGATTGAAACACCTAGGACATAAAATCCTAGGTAGGTGAACCACCATTGATTAAACTCGTTCCCTTTTATTTCTCCATGACCACTAGGTTAAGTCCATGATGGTTGCAGTTTTGTTGAATACTAATTGTTTTGAATAGCTAATTCTAATTCTGACAAGGGGAACTCCTTTTCTTTCTTTTTTTTAATTATATTGGTGAGAGTCGTCTGAGCCAAATTGTTTACGTCTTTTCATTTCATTTCCTTTGGTCAATAGGACATACAATGGACCCTACTACATTTGGTTGATAGGAAATACATAGGATATTAAATTCTAGGTAAGTAATCGCGGGGATTAAACTCTTTTCATTTTATTTCCTTCAGACCTTTATGACCATTAGAAGGCCAACCTATGATGGCCATACTTTTGTTGAATACTAACCGTTTTGAATAGCTAATTCTAATTCTAATAAGGGAACTCATTCTATGGGTTGTAAAGCCAGCTTTTTATCATGCCCTTTATTTTCCAAGCCTCGTCTTTTTGTAGCCGTTGAGGAAACATATGCAAAAATCCATGTTAAAGCTTTTAATTCTTAGGTTTGGCTTCATGACTCGACAACCACACACGGACCGTGCCATCCAGTACACGTTTGTTAACAACTTGTTTCCATCCTTCTCTTGTGTTCGTAGCAATGCAATACATTTTCTGATTAAATTTTTGAGATAGGAGTGGAAAAACTACTTGTTGGTTGCTTCCCCCATTAACATTATTATTTGCAATAAACATTACTTGGCTACACGCTGGTCTGTAGGTGTATATATATATATACTCACATACTCTCATCCCTATTTATAAGAAATGTTTTCTTCCCTTTTCATGTTGCTGTCTTCTGGCCTTAATTTTCATTATACTGCTACAATTGCAGAAGACAAACCGAGTTTTGGGACCAATAGCTCGGCTTAAAGATGTGATCGTGGGAGCCCAGCGACGCGGTTCGTCGATCAAGTCCAGCCCCAATGAGTTATAA ATGAATGATAGACGGTTTCAGTCCCAATCCCTTCACCATTTCCCGAGGCAACTTTCATCCTTATCGTCACGTCGTCGCCGATCGTCGCGAATCTCCGATCGCCTCTCTCTCGTCCGTTTTTGGGAGGTTCCAGCACACGAGGACTCCCTTAGGATGGCAGATAATGATGGAGAAGACAGTACCTCTCGTGGAACTGAATGGGAAGTTGTTTCACTCACTGCTTCGGCATATGAAGCTGCTCCTAGTGCGAAGGAAGATGAACAGAGTGATGAAAATAAAAGCAATTTGTATGAAGCAGAAACTTCCCACGCTCTTTTTATGTCTAAGCACTTTGTATTTCCACCAAGTCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGCGAGATTCATGATGACCAAGGAGTGAAGGAGAATGTGGTGTCTGATTCTGCTGCTGTAGATGGCGGGAAATCTGGTGGAAAGTCTGAAGATAGCTTGAATTTAGAAGGGTTGGGTGAGACAGATGAGTTTTCGGGGATTGATAAAACTACGGAGAAAGGCAGCAAGTTGTCTTTTCATGGTGATGATTTTGGTGAAAATACCACATTACAAGATTTGAATCTGGTTCACAAGGAGCAGGACCTCTTTGGTGCCCCTACATATAGTTCTTTTCATGCTGAAAGTGATCTCAGTTCAACGACATTTGATGAAATCCCTCCACCTGAACCTACTGATCAAGTCTCAACTCCAGAAATCTCAGAAACTCCTAGACTCAATCGTAAGAGCAAAAAGTCCAGTCTTCCTTGTGGTGCTTGGTGGAAGAGAAGAGCTGCGAGTTTATACTCTCATGCAAAAGAAGCGAATGCATTTTGGTCCATTTTCATTGCAGCAGCTGTTATGGGACTTGTAATACTTGGGCAGCGTTGGCAGCAGGAGAGTTGGCAATCTCTGCAACTGAAGTGGCACATTAGTGTGAATGATCAGAAGACAAACCGAGTTTTGGGACCAATAGCTCGGCTTAAAGATGTGATCGTGGGAGCCCAGCGACGCGGTTCGTCGATCAAGTCCAGCCCCAATGAGTTATAA ATGAATGATAGACGGTTTCAGTCCCAATCCCTTCACCATTTCCCGAGGCAACTTTCATCCTTATCGTCACGTCGTCGCCGATCGTCGCGAATCTCCGATCGCCTCTCTCTCGTCCGTTTTTGGGAGGTTCCAGCACACGAGGACTCCCTTAGGATGGCAGATAATGATGGAGAAGACAGTACCTCTCGTGGAACTGAATGGGAAGTTGTTTCACTCACTGCTTCGGCATATGAAGCTGCTCCTAGTGCGAAGGAAGATGAACAGAGTGATGAAAATAAAAGCAATTTGTATGAAGCAGAAACTTCCCACGCTCTTTTTATGTCTAAGCACTTTGTATTTCCACCAAGTCAGCACGAGAATTTGCCATTGGAACCTGATAAGAGCGAGATTCATGATGACCAAGGAGTGAAGGAGAATGTGGTGTCTGATTCTGCTGCTGTAGATGGCGGGAAATCTGGTGGAAAGTCTGAAGATAGCTTGAATTTAGAAGGGTTGGGTGAGACAGATGAGTTTTCGGGGATTGATAAAACTACGGAGAAAGGCAGCAAGTTGTCTTTTCATGGTGATGATTTTGGTGAAAATACCACATTACAAGATTTGAATCTGGTTCACAAGGAGCAGGACCTCTTTGGTGCCCCTACATATAGTTCTTTTCATGCTGAAAGTGATCTCAGTTCAACGACATTTGATGAAATCCCTCCACCTGAACCTACTGATCAAGTCTCAACTCCAGAAATCTCAGAAACTCCTAGACTCAATCGTAAGAGCAAAAAGTCCAGTCTTCCTTGTGGTGCTTGGTGGAAGAGAAGAGCTGCGAGTTTATACTCTCATGCAAAAGAAGCGAATGCATTTTGGTCCATTTTCATTGCAGCAGCTGTTATGGGACTTGTAATACTTGGGCAGCGTTGGCAGCAGGAGAGTTGGCAATCTCTGCAACTGAAGTGGCACATTAGTGTGAATGATCAGAAGACAAACCGAGTTTTGGGACCAATAGCTCGGCTTAAAGATGTGATCGTGGGAGCCCAGCGACGCGGTTCGTCGATCAAGTCCAGCCCCAATGAGTTATAA MNDRRFQSQSLHHFPRQLSSLSSRRRRSSRISDRLSLVRFWEVPAHEDSLRMADNDGEDSTSRGTEWEVVSLTASAYEAAPSAKEDEQSDENKSNLYEAETSHALFMSKHFVFPPSQHENLPLEPDKSEIHDDQGVKENVVSDSAAVDGGKSGGKSEDSLNLEGLGETDEFSGIDKTTEKGSKLSFHGDDFGENTTLQDLNLVHKEQDLFGAPTYSSFHAESDLSSTTFDEIPPPEPTDQVSTPEISETPRLNRKSKKSSLPCGAWWKRRAASLYSHAKEANAFWSIFIAAAVMGLVILGQRWQQESWQSLQLKWHISVNDQKTNRVLGPIARLKDVIVGAQRRGSSIKSSPNEL Homology
BLAST of Csor.00g273720 vs. ExPASy Swiss-Prot
Match: O82775 (ATG8-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=ATI1 PE=1 SV=2) HSP 1 Score: 181.4 bits (459), Expect = 1.8e-44 Identity = 124/306 (40.52%), Postives = 164/306 (53.59%), Query Frame = 0
BLAST of Csor.00g273720 vs. ExPASy Swiss-Prot
Match: Q8VY98 (ATG8-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=ATI2 PE=1 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 5.7e-43 Identity = 123/306 (40.20%), Postives = 166/306 (54.25%), Query Frame = 0
BLAST of Csor.00g273720 vs. NCBI nr
Match: KAG6597130.1 (ATG8-interacting protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 697 bits (1798), Expect = 8.57e-253 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
BLAST of Csor.00g273720 vs. NCBI nr
Match: KAG7028597.1 (ATG8-interacting protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 682 bits (1761), Expect = 4.68e-247 Identity = 348/349 (99.71%), Postives = 348/349 (99.71%), Query Frame = 0
BLAST of Csor.00g273720 vs. NCBI nr
Match: XP_023540318.1 (ATG8-interacting protein 1 [Cucurbita pepo subsp. pepo] >XP_023540319.1 ATG8-interacting protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 595 bits (1533), Expect = 3.11e-213 Identity = 301/304 (99.01%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of Csor.00g273720 vs. NCBI nr
Match: XP_022946451.1 (ATG8-interacting protein 1 [Cucurbita moschata]) HSP 1 Score: 590 bits (1521), Expect = 2.09e-211 Identity = 298/304 (98.03%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of Csor.00g273720 vs. NCBI nr
Match: XP_022974608.1 (LOW QUALITY PROTEIN: ATG8-interacting protein 1-like [Cucurbita maxima]) HSP 1 Score: 531 bits (1369), Expect = 1.33e-188 Identity = 274/304 (90.13%), Postives = 277/304 (91.12%), Query Frame = 0
BLAST of Csor.00g273720 vs. ExPASy TrEMBL
Match: A0A6J1G3Q9 (ATG8-interacting protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450502 PE=4 SV=1) HSP 1 Score: 590 bits (1521), Expect = 1.01e-211 Identity = 298/304 (98.03%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of Csor.00g273720 vs. ExPASy TrEMBL
Match: A0A6J1IGT0 (LOW QUALITY PROTEIN: ATG8-interacting protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473293 PE=4 SV=1) HSP 1 Score: 531 bits (1369), Expect = 6.44e-189 Identity = 274/304 (90.13%), Postives = 277/304 (91.12%), Query Frame = 0
BLAST of Csor.00g273720 vs. ExPASy TrEMBL
Match: A0A0A0L483 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122320 PE=4 SV=1) HSP 1 Score: 504 bits (1297), Expect = 1.32e-177 Identity = 256/304 (84.21%), Postives = 269/304 (88.49%), Query Frame = 0
BLAST of Csor.00g273720 vs. ExPASy TrEMBL
Match: A0A1S3AVI5 (ATG8-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103483267 PE=4 SV=1) HSP 1 Score: 503 bits (1296), Expect = 1.88e-177 Identity = 254/304 (83.55%), Postives = 270/304 (88.82%), Query Frame = 0
BLAST of Csor.00g273720 vs. ExPASy TrEMBL
Match: A0A5A7TZB9 (ATG8-interacting protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004740 PE=4 SV=1) HSP 1 Score: 503 bits (1296), Expect = 1.88e-177 Identity = 254/304 (83.55%), Postives = 270/304 (88.82%), Query Frame = 0
BLAST of Csor.00g273720 vs. TAIR 10
Match: AT2G45980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 181.4 bits (459), Expect = 1.3e-45 Identity = 124/306 (40.52%), Postives = 164/306 (53.59%), Query Frame = 0
BLAST of Csor.00g273720 vs. TAIR 10
Match: AT4G00355.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits to 97 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 176.4 bits (446), Expect = 4.0e-44 Identity = 123/306 (40.20%), Postives = 166/306 (54.25%), Query Frame = 0
BLAST of Csor.00g273720 vs. TAIR 10
Match: AT4G00355.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits to 97 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 176.4 bits (446), Expect = 4.0e-44 Identity = 123/306 (40.20%), Postives = 166/306 (54.25%), Query Frame = 0
BLAST of Csor.00g273720 vs. TAIR 10
Match: AT4G00355.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits to 97 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 176.4 bits (446), Expect = 4.0e-44 Identity = 123/306 (40.20%), Postives = 166/306 (54.25%), Query Frame = 0
BLAST of Csor.00g273720 vs. TAIR 10
Match: AT4G00355.4 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 144.8 bits (364), Expect = 1.3e-34 Identity = 107/277 (38.63%), Postives = 145/277 (52.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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